RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 PDIA3P30101 505 aaKnown RBP8.18□□□□□ -1.1
YBX3-209ENST00000540747 HSPA4P34932 840 aa8.18□□□□□ -1.1
YBX3-209ENST00000540747 GLUD2P49448 558 aa8.18□□□□□ -1.1
YBX3-209ENST00000540747 NPEPPSP55786 919 aa8.18□□□□□ -1.1
YBX3-209ENST00000540747 IRX6P78412 446 aaPredicted RBP8.18□□□□□ -1.1
YBX3-209ENST00000540747 LAMTOR4Q0VGL1 99 aa8.18□□□□□ -1.1
YBX3-209ENST00000540747 PPP2R5CQ13362 524 aa8.18□□□□□ -1.1
YBX3-209ENST00000540747 AMHR2Q16671 573 aa8.18□□□□□ -1.1
YBX3-209ENST00000540747 IFNLR1Q8IU57 520 aaPredicted RBP8.18□□□□□ -1.1
YBX3-209ENST00000540747 MAML2Q8IZL2 1156 aaPredicted RBP8.18□□□□□ -1.1
YBX3-209ENST00000540747 FAM177A1Q8N128 213 aaPredicted RBP8.18□□□□□ -1.1
YBX3-209ENST00000540747 TMEM87AQ8NBN3 555 aa8.18□□□□□ -1.1
YBX3-209ENST00000540747 GSTCDQ8NEC7 633 aa8.18□□□□□ -1.1
YBX3-209ENST00000540747 URGCPQ8TCY9 931 aa8.18□□□□□ -1.1
YBX3-209ENST00000540747 PRPF31Q8WWY3 499 aaKnown RBP8.18□□□□□ -1.1
YBX3-209ENST00000540747 NLRP4Q96MN2 994 aa8.18□□□□□ -1.1
YBX3-209ENST00000540747 JPH2Q9BR39 696 aaPredicted RBP8.18□□□□□ -1.1
YBX3-209ENST00000540747 SLC26A6Q9BXS9 759 aa8.18□□□□□ -1.1
YBX3-209ENST00000540747 C22orf23Q9BZE7 217 aa8.18□□□□□ -1.1
YBX3-209ENST00000540747 RNF39Q9H2S5 420 aa8.18□□□□□ -1.1
YBX3-209ENST00000540747 TBC1D17Q9HA65 648 aa8.18□□□□□ -1.1
YBX3-209ENST00000540747 NCOA5Q9HCD5 579 aaKnown RBP8.18□□□□□ -1.1
YBX3-209ENST00000540747 SLC2A4RGQ9NR83 387 aa8.18□□□□□ -1.1
YBX3-209ENST00000540747 FBXL21Q9UKT6 434 aa8.18□□□□□ -1.1
YBX3-209ENST00000540747 PCDHA4Q9UN74 947 aa8.18□□□□□ -1.1
YBX3-209ENST00000540747 FAN1Q9Y2M0 1017 aa8.18□□□□□ -1.1
YBX3-209ENST00000540747 ZMYM2Q9UBW7 1377 aa8.18□□□□□ -1.1
YBX3-209ENST00000540747 CHD6Q8TD26 2715 aa8.17□□□□□ -1.1
YBX3-209ENST00000540747 MED19A0JLT2 244 aaPredicted RBP8.17□□□□□ -1.1
YBX3-209ENST00000540747 ARL5CA6NH57 179 aa8.17□□□□□ -1.1
YBX3-209ENST00000540747 TSPAN1O60635 241 aa8.17□□□□□ -1.1
YBX3-209ENST00000540747 POMCP01189 267 aa8.17□□□□□ -1.1
YBX3-209ENST00000540747 CFHP08603 1231 aa8.17□□□□□ -1.1
YBX3-209ENST00000540747 SP9P0CG40 484 aa8.17□□□□□ -1.1
YBX3-209ENST00000540747 LAMP2P13473 410 aa8.17□□□□□ -1.1
YBX3-209ENST00000540747 RFC5P40937 340 aa8.17□□□□□ -1.1
YBX3-209ENST00000540747 QARSP47897 775 aaKnown RBP8.17□□□□□ -1.1
YBX3-209ENST00000540747 AK2P54819 239 aa8.17□□□□□ -1.1
YBX3-209ENST00000540747 SPIRE1Q08AE8 756 aa8.17□□□□□ -1.1
YBX3-209ENST00000540747 FERMT3Q86UX7 667 aa8.17□□□□□ -1.1
YBX3-209ENST00000540747 SUMF1Q8NBK3 374 aa8.17□□□□□ -1.1
YBX3-209ENST00000540747 GPR152Q8TDT2 470 aa8.17□□□□□ -1.1
YBX3-209ENST00000540747 PSPC1Q8WXF1 523 aaKnown RBP8.17□□□□□ -1.1
YBX3-209ENST00000540747 SMG7Q92540 1137 aaKnown RBP8.17□□□□□ -1.1
YBX3-209ENST00000540747 STAMQ92783 540 aa8.17□□□□□ -1.1
YBX3-209ENST00000540747 TMEM143Q96AN5 459 aa8.17□□□□□ -1.1
YBX3-209ENST00000540747 CCDC51Q96ER9 411 aa8.17□□□□□ -1.1
YBX3-209ENST00000540747 JAKMIP1Q96N16 626 aaKnown RBP8.17□□□□□ -1.1
YBX3-209ENST00000540747 DDX23Q9BUQ8 820 aaKnown RBP8.17□□□□□ -1.1
YBX3-209ENST00000540747 EIF2AQ9BY44 585 aaKnown RBP8.17□□□□□ -1.1
YBX3-209ENST00000540747 NT5C3AQ9H0P0 336 aa8.17□□□□□ -1.1
YBX3-209ENST00000540747 PLEKHA4Q9H4M7 779 aa8.17□□□□□ -1.1
YBX3-209ENST00000540747 UBN1Q9NPG3 1134 aa8.17□□□□□ -1.1
YBX3-209ENST00000540747 XPNPEP1Q9NQW7 623 aa8.17□□□□□ -1.1
YBX3-209ENST00000540747 ARHGEF3Q9NR81 526 aa8.17□□□□□ -1.1
YBX3-209ENST00000540747 MIOSQ9NXC5 875 aa8.17□□□□□ -1.1
YBX3-209ENST00000540747 ZDHHC7Q9NXF8 308 aa8.17□□□□□ -1.1
YBX3-209ENST00000540747 DLL3Q9NYJ7 618 aa8.17□□□□□ -1.1
YBX3-209ENST00000540747 FNIP2Q9P278 1114 aa8.17□□□□□ -1.1
YBX3-209ENST00000540747 NAP1L2Q9ULW6 460 aaPredicted RBP8.17□□□□□ -1.1
YBX3-209ENST00000540747 SSX2IPQ9Y2D8 614 aa8.17□□□□□ -1.1
YBX3-209ENST00000540747 PRG3Q9Y2Y8 225 aaPredicted RBP8.17□□□□□ -1.1
YBX3-209ENST00000540747 IPPQ9Y573 584 aa8.17□□□□□ -1.1
YBX3-209ENST00000540747 R4GN57 208 aa8.17□□□□□ -1.1
YBX3-209ENST00000540747 POTEMA6NI47 508 aa8.16□□□□□ -1.1
YBX3-209ENST00000540747 C2CD2LO14523 706 aa8.16□□□□□ -1.1
YBX3-209ENST00000540747 TGM5O43548 720 aa8.16□□□□□ -1.1
YBX3-209ENST00000540747 GAS2O43903 313 aaKnown RBP8.16□□□□□ -1.1
YBX3-209ENST00000540747 CDC45O75419 566 aa8.16□□□□□ -1.1
YBX3-209ENST00000540747 P4HBP07237 508 aaKnown RBP8.16□□□□□ -1.1
YBX3-209ENST00000540747 GBP2P32456 591 aaPredicted RBP8.16□□□□□ -1.1
YBX3-209ENST00000540747 MLH1P40692 756 aa8.16□□□□□ -1.1
YBX3-209ENST00000540747 SCNN1GP51170 649 aa8.16□□□□□ -1.1
YBX3-209ENST00000540747 NLRP5P59047 1200 aa8.16□□□□□ -1.1
YBX3-209ENST00000540747 STARD6P59095 220 aa8.16□□□□□ -1.1
YBX3-209ENST00000540747 PTENP60484 403 aa8.16□□□□□ -1.1
YBX3-209ENST00000540747 AKAP17AQ02040 695 aaKnown RBP8.16□□□□□ -1.1
YBX3-209ENST00000540747 POU5F1BQ06416 359 aa8.16□□□□□ -1.1
YBX3-209ENST00000540747 TOB2Q14106 344 aaPredicted RBP8.16□□□□□ -1.1
YBX3-209ENST00000540747 EMC2Q15006 297 aa8.16□□□□□ -1.1
YBX3-209ENST00000540747 NONOQ15233 471 aaKnown RBP eCLIP8.16□□□□□ -1.1
YBX3-209ENST00000540747 PCBP1Q15365 356 aaKnown RBP eCLIP8.16□□□□□ -1.1
YBX3-209ENST00000540747 GALNT17Q6IS24 598 aa8.16□□□□□ -1.1
YBX3-209ENST00000540747 BLOC1S2Q6QNY1 142 aa8.16□□□□□ -1.1
YBX3-209ENST00000540747 C4orf19Q8IY42 314 aa8.16□□□□□ -1.1
YBX3-209ENST00000540747 BLIDQ8IZY5 108 aa8.16□□□□□ -1.1
YBX3-209ENST00000540747 CNNM3Q8NE01 707 aa8.16□□□□□ -1.1
YBX3-209ENST00000540747 PJA1Q8NG27 643 aa8.16□□□□□ -1.1
YBX3-209ENST00000540747 SLC7A3Q8WY07 619 aa8.16□□□□□ -1.1
YBX3-209ENST00000540747 HAS1Q92839 578 aa8.16□□□□□ -1.1
YBX3-209ENST00000540747 DOCK6Q96HP0 2047 aa8.16□□□□□ -1.1
YBX3-209ENST00000540747 FAM20AQ96MK3 541 aa8.16□□□□□ -1.1
YBX3-209ENST00000540747 ZFP42Q96MM3 310 aa8.16□□□□□ -1.1
YBX3-209ENST00000540747 AIFM3Q96NN9 605 aa8.16□□□□□ -1.1
YBX3-209ENST00000540747 GAD1Q99259 594 aa8.16□□□□□ -1.1
YBX3-209ENST00000540747 GPR62Q9BZJ7 368 aa8.16□□□□□ -1.1
YBX3-209ENST00000540747 PRKD2Q9BZL6 878 aa8.16□□□□□ -1.1
YBX3-209ENST00000540747 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.16□□□□□ -1.1
YBX3-209ENST00000540747 DDX25Q9UHL0 483 aaKnown RBP8.16□□□□□ -1.1
YBX3-209ENST00000540747 DPP7Q9UHL4 492 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms