RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 KLHL30Q0D2K2 578 aa9.34□□□□□ -0.91
DDB1-217ENST00000540166 BYSLQ13895 437 aaKnown RBP9.34□□□□□ -0.91
DDB1-217ENST00000540166 ZC3H18Q86VM9 953 aaKnown RBP9.34□□□□□ -0.91
DDB1-217ENST00000540166 MED15Q96RN5 788 aa9.34□□□□□ -0.91
DDB1-217ENST00000540166 PRMT1Q99873 361 aaKnown RBP9.34□□□□□ -0.91
DDB1-217ENST00000540166 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.34□□□□□ -0.912e-8■□□□□ 11
DDB1-217ENST00000540166 ISCUQ9H1K1 167 aa9.34□□□□□ -0.91
DDB1-217ENST00000540166 MROH8Q9H579 483 aa9.34□□□□□ -0.91
DDB1-217ENST00000540166 SEPT11Q9NVA2 429 aaKnown RBP9.34□□□□□ -0.91
DDB1-217ENST00000540166 CCPG1Q9ULG6 757 aa9.34□□□□□ -0.91
DDB1-217ENST00000540166 GSTTP1A0A1W2PQM5 241 aa9.33□□□□□ -0.92
DDB1-217ENST00000540166 DAPK3O43293 454 aa9.33□□□□□ -0.92
DDB1-217ENST00000540166 SLURP2P0DP57 97 aa9.33□□□□□ -0.92
DDB1-217ENST00000540166 VCAM1P19320 739 aa9.33□□□□□ -0.92
DDB1-217ENST00000540166 TNFRSF8P28908 595 aa9.33□□□□□ -0.92
DDB1-217ENST00000540166 TPP2P29144 1249 aaPredicted RBP9.33□□□□□ -0.92
DDB1-217ENST00000540166 COPS2P61201 443 aa9.33□□□□□ -0.92
DDB1-217ENST00000540166 GFPT1Q06210 699 aaPredicted RBP9.33□□□□□ -0.92
DDB1-217ENST00000540166 DYMQ7RTS9 669 aa9.33□□□□□ -0.92
DDB1-217ENST00000540166 CABP7Q86V35 215 aa9.33□□□□□ -0.92
DDB1-217ENST00000540166 MREGQ8N565 214 aa9.33□□□□□ -0.92
DDB1-217ENST00000540166 ZCWPW1Q9H0M4 648 aa9.33□□□□□ -0.92
DDB1-217ENST00000540166 DDX47Q9H0S4 455 aaKnown RBP9.33□□□□□ -0.92
DDB1-217ENST00000540166 USP15Q9Y4E8 981 aaPredicted RBP9.33□□□□□ -0.92
DDB1-217ENST00000540166 LRRC10BA6NIK2 292 aa9.33□□□□□ -0.92
DDB1-217ENST00000540166 PP2D1A8MPX8 630 aa9.33□□□□□ -0.92
DDB1-217ENST00000540166 GJB1P08034 283 aa9.33□□□□□ -0.92
DDB1-217ENST00000540166 STAT2P52630 851 aa9.33□□□□□ -0.92
DDB1-217ENST00000540166 KCNJ2P63252 427 aa9.33□□□□□ -0.92
DDB1-217ENST00000540166 ATP2C1P98194 919 aaPredicted RBP9.33□□□□□ -0.92
DDB1-217ENST00000540166 DRAXINQ8NBI3 349 aaPredicted RBP9.33□□□□□ -0.92
DDB1-217ENST00000540166 MAIP1Q8WWC4 291 aa9.33□□□□□ -0.92
DDB1-217ENST00000540166 DNAJC9Q8WXX5 260 aa9.33□□□□□ -0.92
DDB1-217ENST00000540166 MS4A4AQ96JQ5 239 aa9.33□□□□□ -0.92
DDB1-217ENST00000540166 ANKRD27Q96NW4 1050 aa9.33□□□□□ -0.92
DDB1-217ENST00000540166 PHF20Q9BVI0 1012 aa9.33□□□□□ -0.92
DDB1-217ENST00000540166 FAM129AQ9BZQ8 928 aa9.33□□□□□ -0.92
DDB1-217ENST00000540166 UNC93B1Q9H1C4 597 aa9.33□□□□□ -0.92
DDB1-217ENST00000540166 GDF3Q9NR23 364 aa9.33□□□□□ -0.92
DDB1-217ENST00000540166 PLEKP08567 350 aaPredicted RBP9.33□□□□□ -0.92
DDB1-217ENST00000540166 TRAPPC10P48553 1259 aa9.33□□□□□ -0.92
DDB1-217ENST00000540166 ZNF844Q08AG5 666 aa9.33□□□□□ -0.92
DDB1-217ENST00000540166 FAM160B2Q86V87 743 aa9.33□□□□□ -0.92
DDB1-217ENST00000540166 PAWRQ96IZ0 340 aaKnown RBP9.33□□□□□ -0.92
DDB1-217ENST00000540166 GORASP1Q9BQQ3 440 aa9.33□□□□□ -0.92
DDB1-217ENST00000540166 TEX13BQ9BXU2 312 aa9.33□□□□□ -0.92
DDB1-217ENST00000540166 KIAA1683Q9H0B3 1180 aa9.33□□□□□ -0.92
DDB1-217ENST00000540166 ZMYND12Q9H0C1 365 aa9.33□□□□□ -0.92
DDB1-217ENST00000540166 STOML1Q9UBI4 398 aa9.33□□□□□ -0.92
DDB1-217ENST00000540166 RPTORQ8N122 1335 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 DCDC2CA8MYV0 355 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 NMT2O60551 498 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 CCNT1O60563 726 aaKnown RBP9.32□□□□□ -0.92
DDB1-217ENST00000540166 C6orf222P0C671 652 aaPredicted RBP9.32□□□□□ -0.92
DDB1-217ENST00000540166 DRD4P21917 467 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 GNAQP50148 359 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 PLTPP55058 493 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 MTFR1Q15390 333 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 C6orf163Q5TEZ5 329 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 ATG4CQ96DT6 458 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 DHTKD1Q96HY7 919 aaPredicted RBP9.32□□□□□ -0.92
DDB1-217ENST00000540166 GLT1D1Q96MS3 346 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 APBA2Q99767 749 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 SLC45A1Q9Y2W3 748 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 F5H6K3 240 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 SART1O43290 800 aaKnown RBP9.32□□□□□ -0.92
DDB1-217ENST00000540166 PPFIA2O75334 1257 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 RAG1P15918 1043 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 FECHP22830 423 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 TXKP42681 527 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 KLK7P49862 253 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 KLRC3Q07444 240 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 MAP2K5Q13163 448 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 C6orf118Q5T5N4 469 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 CDCA2Q69YH5 1023 aaPredicted RBP9.32□□□□□ -0.92
DDB1-217ENST00000540166 C17orf99Q6UX52 265 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 EEPD1Q7L9B9 569 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 GPR142Q7Z601 462 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 STAG2Q8N3U4 1231 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 P2RX5Q93086 422 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 MCUR1Q96AQ8 359 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 PBKQ96KB5 322 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 UBE2OQ9C0C9 1292 aaKnown RBP9.32□□□□□ -0.92
DDB1-217ENST00000540166 DISC1Q9NRI5 854 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 COL4A5P29400 1685 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 hCG_2014768A0A024R1R8 64 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 DPPA5A6NC42 116 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 ASAP2O43150 1006 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 SERPINB4P48594 390 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 RCN2Q14257 317 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 LRRC14Q15048 493 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 TMEM266Q2M3C6 531 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 CNNM4Q6P4Q7 775 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 WDR59Q6PJI9 974 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 TMTC3Q6ZXV5 915 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 SV2BQ7L1I2 683 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 APTXQ7Z2E3 356 aaKnown RBP9.32□□□□□ -0.92
DDB1-217ENST00000540166 LRRC8CQ8TDW0 803 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 CTNNBL1Q8WYA6 563 aaPredicted RBP9.32□□□□□ -0.92
DDB1-217ENST00000540166 ABTB1Q969K4 478 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms