RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 PLA2G4BP0C869 781 aa7.16□□□□□ -1.26
SNHG1-212ENST00000539975 SRGAP2CP0DJJ0 459 aa7.16□□□□□ -1.26
SNHG1-212ENST00000539975 CSF2RAP15509 400 aa7.16□□□□□ -1.26
SNHG1-212ENST00000539975 ZSCAN20P17040 1043 aaPredicted RBP7.16□□□□□ -1.26
SNHG1-212ENST00000539975 CYP11B2P19099 503 aa7.16□□□□□ -1.26
SNHG1-212ENST00000539975 SFPQP23246 707 aaKnown RBP eCLIP7.16□□□□□ -1.26
SNHG1-212ENST00000539975 HOXC8P31273 242 aa7.16□□□□□ -1.26
SNHG1-212ENST00000539975 ABCD1P33897 745 aa7.16□□□□□ -1.26
SNHG1-212ENST00000539975 PHKA2P46019 1235 aa7.16□□□□□ -1.26
SNHG1-212ENST00000539975 KCNJ6P48051 423 aa7.16□□□□□ -1.26
SNHG1-212ENST00000539975 ATP1A2P50993 1020 aa7.16□□□□□ -1.26
SNHG1-212ENST00000539975 CLCN3P51790 818 aa7.16□□□□□ -1.26
SNHG1-212ENST00000539975 CRYBB1P53674 252 aaPredicted RBP7.16□□□□□ -1.26
SNHG1-212ENST00000539975 GDF10P55107 478 aa7.16□□□□□ -1.26
SNHG1-212ENST00000539975 NLRP11P59045 1033 aaKnown RBP7.16□□□□□ -1.26
SNHG1-212ENST00000539975 ADAM17P78536 824 aa7.16□□□□□ -1.26
SNHG1-212ENST00000539975 TMEM62Q0P6H9 643 aa7.16□□□□□ -1.26
SNHG1-212ENST00000539975 PAK2Q13177 524 aa7.16□□□□□ -1.26
SNHG1-212ENST00000539975 IKBKEQ14164 716 aa7.16□□□□□ -1.26
SNHG1-212ENST00000539975 EMC2Q15006 297 aa7.16□□□□□ -1.26
SNHG1-212ENST00000539975 TARBP2Q15633 366 aaKnown RBP7.16□□□□□ -1.26
SNHG1-212ENST00000539975 ZNF618Q5T7W0 954 aa7.16□□□□□ -1.26
SNHG1-212ENST00000539975 DEFB128Q7Z7B8 93 aa7.16□□□□□ -1.26
SNHG1-212ENST00000539975 ZNF410Q86VK4 478 aa7.16□□□□□ -1.26
SNHG1-212ENST00000539975 ZBTB8OSQ8IWT0 167 aa7.16□□□□□ -1.26
SNHG1-212ENST00000539975 KIAA0319LQ8IZA0 1049 aa7.16□□□□□ -1.26
SNHG1-212ENST00000539975 PDILTQ8N807 584 aa7.16□□□□□ -1.26
SNHG1-212ENST00000539975 PRPF31Q8WWY3 499 aaKnown RBP7.16□□□□□ -1.26
SNHG1-212ENST00000539975 NANOS1Q8WY41 292 aaKnown RBP7.16□□□□□ -1.26
SNHG1-212ENST00000539975 LARP4BQ92615 738 aaKnown RBP7.16□□□□□ -1.26
SNHG1-212ENST00000539975 APBB2Q92870 758 aa7.16□□□□□ -1.26
SNHG1-212ENST00000539975 CCDC47Q96A33 483 aaKnown RBP7.16□□□□□ -1.26
SNHG1-212ENST00000539975 TRIM43Q96BQ3 446 aaPredicted RBP7.16□□□□□ -1.26
SNHG1-212ENST00000539975 EPSTI1Q96J88 318 aa7.16□□□□□ -1.26
SNHG1-212ENST00000539975 NLRP4Q96MN2 994 aa7.16□□□□□ -1.26
SNHG1-212ENST00000539975 DHX33Q9H6R0 707 aaKnown RBP7.16□□□□□ -1.26
SNHG1-212ENST00000539975 MAGEF1Q9HAY2 307 aa7.16□□□□□ -1.26
SNHG1-212ENST00000539975 IL23AQ9NPF7 189 aa7.16□□□□□ -1.26
SNHG1-212ENST00000539975 LARSQ9P2J5 1176 aaKnown RBP7.16□□□□□ -1.26
SNHG1-212ENST00000539975 USP25Q9UHP3 1055 aa7.16□□□□□ -1.26
SNHG1-212ENST00000539975 KCNH3Q9ULD8 1083 aa7.16□□□□□ -1.26
SNHG1-212ENST00000539975 PCDHA7Q9UN72 937 aa7.16□□□□□ -1.26
SNHG1-212ENST00000539975 ZDHHC9Q9Y397 364 aa7.16□□□□□ -1.26
SNHG1-212ENST00000539975 COL4A3BPQ9Y5P4 624 aa7.16□□□□□ -1.26
SNHG1-212ENST00000539975 CDY2AQ9Y6F7 541 aa7.16□□□□□ -1.26
SNHG1-212ENST00000539975 SQORQ9Y6N5 450 aa7.16□□□□□ -1.26
SNHG1-212ENST00000539975 LCTP09848 1927 aa7.16□□□□□ -1.26
SNHG1-212ENST00000539975 PHLPP2Q6ZVD8 1323 aa7.16□□□□□ -1.26
SNHG1-212ENST00000539975 KIAA1217Q5T5P2 1943 aa7.15□□□□□ -1.26
SNHG1-212ENST00000539975 A0A087WWV3 80 aa7.15□□□□□ -1.26
SNHG1-212ENST00000539975 DENND3A2RUS2 1198 aa7.15□□□□□ -1.26
SNHG1-212ENST00000539975 TMEM150BA6NC51 233 aa7.15□□□□□ -1.26
SNHG1-212ENST00000539975 LRRIQ4A6NIV6 560 aa7.15□□□□□ -1.26
SNHG1-212ENST00000539975 CCDC169A6NNP5 214 aa7.15□□□□□ -1.26
SNHG1-212ENST00000539975 ZBTB42B2RXF5 422 aa7.15□□□□□ -1.26
SNHG1-212ENST00000539975 ZBTB39O15060 712 aa7.15□□□□□ -1.26
SNHG1-212ENST00000539975 POLR2DO15514 142 aaKnown RBP7.15□□□□□ -1.26
SNHG1-212ENST00000539975 WIPF1O43516 503 aa7.15□□□□□ -1.26
SNHG1-212ENST00000539975 FAM13AO94988 1023 aa7.15□□□□□ -1.26
SNHG1-212ENST00000539975 VTNP04004 478 aa7.15□□□□□ -1.26
SNHG1-212ENST00000539975 PLCG1P19174 1290 aa7.15□□□□□ -1.26
SNHG1-212ENST00000539975 SCP2P22307 547 aa7.15□□□□□ -1.26
SNHG1-212ENST00000539975 EIF4BP23588 611 aaKnown RBP7.15□□□□□ -1.26
SNHG1-212ENST00000539975 CMA1P23946 247 aa7.15□□□□□ -1.26
SNHG1-212ENST00000539975 MAGEA10P43363 369 aaPredicted RBP7.15□□□□□ -1.26
SNHG1-212ENST00000539975 RBL2Q08999 1139 aa7.15□□□□□ -1.26
SNHG1-212ENST00000539975 LAMTOR4Q0VGL1 99 aa7.15□□□□□ -1.26
SNHG1-212ENST00000539975 DMP1Q13316 513 aaPredicted RBP7.15□□□□□ -1.26
SNHG1-212ENST00000539975 PCBP1Q15365 356 aaKnown RBP eCLIP7.15□□□□□ -1.26
SNHG1-212ENST00000539975 KIZQ2M2Z5 673 aa7.15□□□□□ -1.26
SNHG1-212ENST00000539975 HYIQ5T013 277 aa7.15□□□□□ -1.26
SNHG1-212ENST00000539975 KANK3Q6NY19 840 aa7.15□□□□□ -1.26
SNHG1-212ENST00000539975 CNKSR3Q6P9H4 555 aa7.15□□□□□ -1.26
SNHG1-212ENST00000539975 RUFY4Q6ZNE9 571 aa7.15□□□□□ -1.26
SNHG1-212ENST00000539975 STXBP4Q6ZWJ1 553 aa7.15□□□□□ -1.26
SNHG1-212ENST00000539975 TAS1R3Q7RTX0 852 aa7.15□□□□□ -1.26
SNHG1-212ENST00000539975 APBB1IPQ7Z5R6 666 aaPredicted RBP7.15□□□□□ -1.26
SNHG1-212ENST00000539975 GPBP1Q86WP2 473 aa7.15□□□□□ -1.26
SNHG1-212ENST00000539975 SYT2Q8N9I0 419 aaPredicted RBP7.15□□□□□ -1.26
SNHG1-212ENST00000539975 SLC17A8Q8NDX2 589 aa7.15□□□□□ -1.26
SNHG1-212ENST00000539975 DEPTORQ8TB45 409 aa7.15□□□□□ -1.26
SNHG1-212ENST00000539975 MRPS27Q92552 414 aaKnown RBP7.15□□□□□ -1.26
SNHG1-212ENST00000539975 RAD54LQ92698 747 aa7.15□□□□□ -1.26
SNHG1-212ENST00000539975 TMEM143Q96AN5 459 aa7.15□□□□□ -1.26
SNHG1-212ENST00000539975 DHX58Q96C10 678 aa7.15□□□□□ -1.26
SNHG1-212ENST00000539975 SCLYQ96I15 445 aa7.15□□□□□ -1.26
SNHG1-212ENST00000539975 PPP1R16BQ96T49 567 aa7.15□□□□□ -1.26
SNHG1-212ENST00000539975 FTHL17Q9BXU8 183 aa7.15□□□□□ -1.26
SNHG1-212ENST00000539975 IFIH1Q9BYX4 1025 aaKnown RBP7.15□□□□□ -1.26
SNHG1-212ENST00000539975 POLR3FQ9H1D9 316 aaPredicted RBP7.15□□□□□ -1.26
SNHG1-212ENST00000539975 C2orf40Q9H1Z8 148 aa7.15□□□□□ -1.26
SNHG1-212ENST00000539975 C17orf75Q9HAS0 396 aa7.15□□□□□ -1.26
SNHG1-212ENST00000539975 WRAP73Q9P2S5 460 aaPredicted RBP7.15□□□□□ -1.26
SNHG1-212ENST00000539975 DYRK1BQ9Y463 629 aa7.15□□□□□ -1.26
SNHG1-212ENST00000539975 IGKV6-21A0A0C4DH24 114 aa7.14□□□□□ -1.27
SNHG1-212ENST00000539975 ABHD14A-ACY1A0A1B0GW23 586 aa7.14□□□□□ -1.27
SNHG1-212ENST00000539975 A0A1W2PQ27 194 aa7.14□□□□□ -1.27
SNHG1-212ENST00000539975 A0A1W2PQ64 194 aa7.14□□□□□ -1.27
SNHG1-212ENST00000539975 A0A1W2PQD8 194 aa7.14□□□□□ -1.27
SNHG1-212ENST00000539975 INO80B-WBP1J3KQ70 363 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms