RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 PON1P27169 355 aa18.37■□□□□ 0.53
COPS3-212ENST00000539941 CTGFP29279 349 aa18.37■□□□□ 0.53
COPS3-212ENST00000539941 PSMC4P43686 418 aa18.37■□□□□ 0.53
COPS3-212ENST00000539941 SNRNP35Q16560 246 aaKnown RBP18.37■□□□□ 0.53
COPS3-212ENST00000539941 PDXDC1Q6P996 788 aa18.37■□□□□ 0.53
COPS3-212ENST00000539941 WDR59Q6PJI9 974 aa18.37■□□□□ 0.53
COPS3-212ENST00000539941 RAD9BQ6WBX8 426 aa18.37■□□□□ 0.53
COPS3-212ENST00000539941 ZPBP2Q6X784 338 aa18.37■□□□□ 0.53
COPS3-212ENST00000539941 TLK2Q86UE8 772 aa18.37■□□□□ 0.53
COPS3-212ENST00000539941 GPD1LQ8N335 351 aa18.37■□□□□ 0.53
COPS3-212ENST00000539941 LRRC71Q8N4P6 559 aa18.37■□□□□ 0.53
COPS3-212ENST00000539941 TRAPPC12Q8WVT3 735 aa18.37■□□□□ 0.53
COPS3-212ENST00000539941 CRACR2AQ9BSW2 395 aa18.37■□□□□ 0.53
COPS3-212ENST00000539941 NFKBIZQ9BYH8 718 aa18.37■□□□□ 0.53
COPS3-212ENST00000539941 TRMT1Q9NXH9 659 aaKnown RBP18.37■□□□□ 0.53
COPS3-212ENST00000539941 MYO6Q9UM54 1294 aa18.37■□□□□ 0.53
COPS3-212ENST00000539941 PPP2R2CQ9Y2T4 447 aa18.37■□□□□ 0.53
COPS3-212ENST00000539941 PAXBP1Q9Y5B6 917 aa18.37■□□□□ 0.53
COPS3-212ENST00000539941 DYNC1LI2O43237 492 aaPredicted RBP18.36■□□□□ 0.53
COPS3-212ENST00000539941 CPT1AP50416 773 aa18.36■□□□□ 0.53
COPS3-212ENST00000539941 NYAP1Q6ZVC0 841 aa18.36■□□□□ 0.53
COPS3-212ENST00000539941 CCDC170Q8IYT3 715 aa18.36■□□□□ 0.53
COPS3-212ENST00000539941 LINC01465Q8N7H1 131 aa18.36■□□□□ 0.53
COPS3-212ENST00000539941 RDH13Q8NBN7 331 aa18.36■□□□□ 0.53
COPS3-212ENST00000539941 TMC2Q8TDI7 906 aa18.36■□□□□ 0.53
COPS3-212ENST00000539941 MFSD14AQ96MC6 490 aa18.36■□□□□ 0.53
COPS3-212ENST00000539941 CCDC113Q9H0I3 377 aa18.36■□□□□ 0.53
COPS3-212ENST00000539941 GCNT4Q9P109 453 aa18.36■□□□□ 0.53
COPS3-212ENST00000539941 RRN3P2A6NIE6 340 aa18.35■□□□□ 0.53
COPS3-212ENST00000539941 EXTL3O43909 919 aa18.35■□□□□ 0.53
COPS3-212ENST00000539941 ADRB2P07550 413 aa18.35■□□□□ 0.53
COPS3-212ENST00000539941 KLRC1P26715 233 aa18.35■□□□□ 0.53
COPS3-212ENST00000539941 TMOD1P28289 359 aa18.35■□□□□ 0.53
COPS3-212ENST00000539941 MYL7Q01449 175 aa18.35■□□□□ 0.53
COPS3-212ENST00000539941 CETN1Q12798 172 aa18.35■□□□□ 0.53
COPS3-212ENST00000539941 PPFIA1Q13136 1202 aa18.35■□□□□ 0.53
COPS3-212ENST00000539941 KLHDC7AQ5VTJ3 777 aa18.35■□□□□ 0.53
COPS3-212ENST00000539941 DPY19L2P1Q6NXN4 242 aa18.35■□□□□ 0.53
COPS3-212ENST00000539941 TOGARAM2Q6ZUX3 1019 aa18.35■□□□□ 0.53
COPS3-212ENST00000539941 RRAGAQ7L523 313 aa18.35■□□□□ 0.53
COPS3-212ENST00000539941 CTU1Q7Z7A3 348 aaKnown RBP18.35■□□□□ 0.53
COPS3-212ENST00000539941 KRT222Q8N1A0 295 aa18.35■□□□□ 0.53
COPS3-212ENST00000539941 METTL13Q8N6R0 699 aa18.35■□□□□ 0.53
COPS3-212ENST00000539941 RNF149Q8NC42 400 aa18.35■□□□□ 0.53
COPS3-212ENST00000539941 AP5M1Q9H0R1 490 aa18.35■□□□□ 0.53
COPS3-212ENST00000539941 ADGRG1Q9Y653 693 aa18.35■□□□□ 0.53
COPS3-212ENST00000539941 LRRC53A6NM62 1247 aa18.34■□□□□ 0.53
COPS3-212ENST00000539941 LDHAP00338 332 aaKnown RBP18.34■□□□□ 0.53
COPS3-212ENST00000539941 F2P00734 622 aa18.34■□□□□ 0.53
COPS3-212ENST00000539941 TRIM49P0CI25 452 aa18.34■□□□□ 0.53
COPS3-212ENST00000539941 TRIM49CP0CI26 452 aa18.34■□□□□ 0.53
COPS3-212ENST00000539941 AKR1A1P14550 325 aa18.34■□□□□ 0.53
COPS3-212ENST00000539941 SLC9A1P19634 815 aa18.34■□□□□ 0.53
COPS3-212ENST00000539941 POLR2FP61218 127 aaKnown RBP18.34■□□□□ 0.53
COPS3-212ENST00000539941 PTPN14Q15678 1187 aa18.34■□□□□ 0.53
COPS3-212ENST00000539941 MAPK6Q16659 721 aa18.34■□□□□ 0.53
COPS3-212ENST00000539941 MFSD14CQ5VZR4 134 aa18.34■□□□□ 0.53
COPS3-212ENST00000539941 RHPN2Q8IUC4 686 aa18.34■□□□□ 0.53
COPS3-212ENST00000539941 CBWD2Q8IUF1 395 aa18.34■□□□□ 0.53
COPS3-212ENST00000539941 MRPL4Q9BYD3 311 aaKnown RBP18.34■□□□□ 0.53
COPS3-212ENST00000539941 ZSWIM8A7E2V4 1837 aa18.34■□□□□ 0.53
COPS3-212ENST00000539941 GOLGA8IPA6NC78 632 aa18.34■□□□□ 0.53
COPS3-212ENST00000539941 CCDC85CA6NKD9 419 aa18.34■□□□□ 0.53
COPS3-212ENST00000539941 GOLGA8JA6NMD2 632 aa18.34■□□□□ 0.53
COPS3-212ENST00000539941 MSCO60682 206 aa18.34■□□□□ 0.53
COPS3-212ENST00000539941 UCHL3P15374 230 aa18.34■□□□□ 0.53
COPS3-212ENST00000539941 RFX1P22670 979 aa18.34■□□□□ 0.53
COPS3-212ENST00000539941 GTF2H1P32780 548 aa18.34■□□□□ 0.53
COPS3-212ENST00000539941 CYLC1P35663 651 aaPredicted RBP18.34■□□□□ 0.53
COPS3-212ENST00000539941 CLCN3P51790 818 aa18.34■□□□□ 0.53
COPS3-212ENST00000539941 IGBP1P78318 339 aa18.34■□□□□ 0.53
COPS3-212ENST00000539941 IRX5P78411 483 aaPredicted RBP18.34■□□□□ 0.53
COPS3-212ENST00000539941 CYP24A1Q07973 514 aa18.34■□□□□ 0.53
COPS3-212ENST00000539941 KIF22Q14807 665 aa18.34■□□□□ 0.53
COPS3-212ENST00000539941 MTF1Q14872 753 aa18.34■□□□□ 0.53
COPS3-212ENST00000539941 GRIK4Q16099 956 aa18.34■□□□□ 0.53
COPS3-212ENST00000539941 TRIM65Q6PJ69 517 aa18.34■□□□□ 0.53
COPS3-212ENST00000539941 MTHFD1LQ6UB35 978 aa18.34■□□□□ 0.53
COPS3-212ENST00000539941 IFNLR1Q8IU57 520 aaPredicted RBP18.34■□□□□ 0.53
COPS3-212ENST00000539941 REXO1L1PQ8IX06 675 aa18.34■□□□□ 0.53
COPS3-212ENST00000539941 SAAL1Q96ER3 474 aa18.34■□□□□ 0.53
COPS3-212ENST00000539941 C16orf45Q96MC5 204 aaPredicted RBP18.34■□□□□ 0.53
COPS3-212ENST00000539941 CHP1Q99653 195 aa18.34■□□□□ 0.53
COPS3-212ENST00000539941 EPN1Q9Y6I3 576 aaPredicted RBP18.34■□□□□ 0.53
COPS3-212ENST00000539941 ZNF233A6NK53 670 aa18.33■□□□□ 0.52
COPS3-212ENST00000539941 NDUFA10O95299 355 aa18.33■□□□□ 0.52
COPS3-212ENST00000539941 SRGAP2CP0DJJ0 459 aa18.33■□□□□ 0.52
COPS3-212ENST00000539941 PTENP60484 403 aa18.33■□□□□ 0.52
COPS3-212ENST00000539941 TERF2Q15554 542 aa18.33■□□□□ 0.52
COPS3-212ENST00000539941 CBWD6Q4V339 395 aa18.33■□□□□ 0.52
COPS3-212ENST00000539941 CBWD3Q5JTY5 395 aa18.33■□□□□ 0.52
COPS3-212ENST00000539941 CBWD5Q5RIA9 395 aa18.33■□□□□ 0.52
COPS3-212ENST00000539941 SFMBT2Q5VUG0 894 aa18.33■□□□□ 0.52
COPS3-212ENST00000539941 ZSWIM2Q8NEG5 633 aa18.33■□□□□ 0.52
COPS3-212ENST00000539941 PARD3BQ8TEW8 1205 aa18.33■□□□□ 0.52
COPS3-212ENST00000539941 TARS2Q9BW92 718 aaKnown RBP18.33■□□□□ 0.52
COPS3-212ENST00000539941 SIX2Q9NPC8 291 aa18.33■□□□□ 0.52
COPS3-212ENST00000539941 NLRC4Q9NPP4 1024 aa18.33■□□□□ 0.52
COPS3-212ENST00000539941 AGO2Q9UKV8 859 aaKnown RBP18.33■□□□□ 0.52
COPS3-212ENST00000539941 KAT6AQ92794 2004 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms