RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 MCCD1P59942 119 aaPredicted RBP24.37■■□□□ 1.49
HOMER3-204ENST00000539827 PTK2Q05397 1052 aa24.37■■□□□ 1.49
HOMER3-204ENST00000539827 LAMTOR4Q0VGL1 99 aa24.37■■□□□ 1.49
HOMER3-204ENST00000539827 ARHGAP44Q17R89 818 aa24.37■■□□□ 1.49
HOMER3-204ENST00000539827 TMC2Q8TDI7 906 aa24.37■■□□□ 1.49
HOMER3-204ENST00000539827 NAPGQ99747 312 aaPredicted RBP24.37■■□□□ 1.49
HOMER3-204ENST00000539827 TSGA10Q9BZW7 698 aa24.37■■□□□ 1.49
HOMER3-204ENST00000539827 HAPLN2Q9GZV7 340 aa24.37■■□□□ 1.49
HOMER3-204ENST00000539827 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.37■■□□□ 1.492e-12■■■■■ 298.1
HOMER3-204ENST00000539827 ERAP1Q9NZ08 941 aa24.37■■□□□ 1.49
HOMER3-204ENST00000539827 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.37■■□□□ 1.49
HOMER3-204ENST00000539827 V9GYY5 206 aaPredicted RBP24.37■■□□□ 1.49
HOMER3-204ENST00000539827 A0A087X0T9 212 aa24.36■■□□□ 1.49
HOMER3-204ENST00000539827 RBAK-RBAKDNI3L0D1 243 aa24.36■■□□□ 1.49
HOMER3-204ENST00000539827 PIGRP01833 764 aa24.36■■□□□ 1.49
HOMER3-204ENST00000539827 FAM228BP0C875 321 aa24.36■■□□□ 1.49
HOMER3-204ENST00000539827 SMPD1P17405 629 aa24.36■■□□□ 1.49
HOMER3-204ENST00000539827 IGBP1P78318 339 aa24.36■■□□□ 1.49
HOMER3-204ENST00000539827 ACVR2BQ13705 512 aa24.36■■□□□ 1.49
HOMER3-204ENST00000539827 ARHGEF19Q8IW93 802 aa24.36■■□□□ 1.49
HOMER3-204ENST00000539827 PSPC1Q8WXF1 523 aaKnown RBP24.36■■□□□ 1.49
HOMER3-204ENST00000539827 ZNF668Q96K58 619 aaPredicted RBP24.36■■□□□ 1.49
HOMER3-204ENST00000539827 CARD6Q9BX69 1037 aa24.36■■□□□ 1.49
HOMER3-204ENST00000539827 SUCLA2Q9P2R7 463 aaPredicted RBP24.36■■□□□ 1.49
HOMER3-204ENST00000539827 ADAMTS1Q9UHI8 967 aa24.36■■□□□ 1.49
HOMER3-204ENST00000539827 STYXL1Q9Y6J8 313 aa24.36■■□□□ 1.49
HOMER3-204ENST00000539827 EXTL3O43909 919 aa24.36■■□□□ 1.49
HOMER3-204ENST00000539827 SCP2P22307 547 aa24.36■■□□□ 1.49
HOMER3-204ENST00000539827 SOX5P35711 763 aa24.36■■□□□ 1.49
HOMER3-204ENST00000539827 MATR3P43243 847 aaKnown RBP eCLIP24.36■■□□□ 1.49
HOMER3-204ENST00000539827 SLC18A3Q16572 532 aa24.36■■□□□ 1.49
HOMER3-204ENST00000539827 EXOC8Q8IYI6 725 aa24.36■■□□□ 1.49
HOMER3-204ENST00000539827 PPTC7Q8NI37 304 aa24.36■■□□□ 1.49
HOMER3-204ENST00000539827 ERO1AQ96HE7 468 aa24.36■■□□□ 1.49
HOMER3-204ENST00000539827 GPR88Q9GZN0 384 aa24.36■■□□□ 1.49
HOMER3-204ENST00000539827 AGO2Q9UKV8 859 aaKnown RBP24.36■■□□□ 1.49
HOMER3-204ENST00000539827 MRFAP1Q9Y605 127 aa24.36■■□□□ 1.49
HOMER3-204ENST00000539827 ZNF233A6NK53 670 aa24.35■■□□□ 1.49
HOMER3-204ENST00000539827 F8VZ95 297 aa24.35■■□□□ 1.49
HOMER3-204ENST00000539827 GAS2O43903 313 aaKnown RBP24.35■■□□□ 1.49
HOMER3-204ENST00000539827 GJB1P08034 283 aa24.35■■□□□ 1.49
HOMER3-204ENST00000539827 ZNF286BP0CG31 522 aa24.35■■□□□ 1.49
HOMER3-204ENST00000539827 DLATP10515 647 aaKnown RBP24.35■■□□□ 1.49
HOMER3-204ENST00000539827 FERP16591 822 aa24.35■■□□□ 1.49
HOMER3-204ENST00000539827 PRKCIP41743 596 aa24.35■■□□□ 1.49
HOMER3-204ENST00000539827 NLRP11P59045 1033 aaKnown RBP24.35■■□□□ 1.49
HOMER3-204ENST00000539827 EFCAB12Q6NXP0 572 aa24.35■■□□□ 1.49
HOMER3-204ENST00000539827 RNF149Q8NC42 400 aa24.35■■□□□ 1.49
HOMER3-204ENST00000539827 ABHD16BQ9H3Z7 469 aa24.35■■□□□ 1.49
HOMER3-204ENST00000539827 UBE2TQ9NPD8 197 aaPredicted RBP24.35■■□□□ 1.49
HOMER3-204ENST00000539827 ANKFY1Q9P2R3 1169 aa24.35■■□□□ 1.49
HOMER3-204ENST00000539827 BZW2Q9Y6E2 419 aaKnown RBP24.35■■□□□ 1.49
HOMER3-204ENST00000539827 ACOT2P49753 483 aa24.34■■□□□ 1.49
HOMER3-204ENST00000539827 CLCN3P51790 818 aa24.34■■□□□ 1.49
HOMER3-204ENST00000539827 MORN1Q5T089 497 aa24.34■■□□□ 1.49
HOMER3-204ENST00000539827 RHPN2Q8IUC4 686 aa24.34■■□□□ 1.49
HOMER3-204ENST00000539827 METTL13Q8N6R0 699 aa24.34■■□□□ 1.49
HOMER3-204ENST00000539827 SEMA4DQ92854 862 aa24.34■■□□□ 1.49
HOMER3-204ENST00000539827 SECISBP2LQ93073 1101 aaKnown RBP24.34■■□□□ 1.49
HOMER3-204ENST00000539827 EMID1Q96A84 441 aaPredicted RBP24.34■■□□□ 1.49
HOMER3-204ENST00000539827 FAM84AQ96KN4 292 aa24.34■■□□□ 1.49
HOMER3-204ENST00000539827 TTLL13PA6NNM8 815 aa24.34■■□□□ 1.49
HOMER3-204ENST00000539827 SLC10A3P09131 477 aa24.34■■□□□ 1.49
HOMER3-204ENST00000539827 INSRRP14616 1297 aa24.34■■□□□ 1.49
HOMER3-204ENST00000539827 MXD4Q14582 209 aaPredicted RBP24.34■■□□□ 1.49
HOMER3-204ENST00000539827 PRAMEF19Q5SWL8 479 aa24.34■■□□□ 1.49
HOMER3-204ENST00000539827 KRT39Q6A163 491 aa24.34■■□□□ 1.49
HOMER3-204ENST00000539827 IFNL1Q8IU54 200 aa24.34■■□□□ 1.49
HOMER3-204ENST00000539827 OR6J1Q8NGC5 347 aa24.34■■□□□ 1.49
HOMER3-204ENST00000539827 JPH2Q9BR39 696 aaPredicted RBP24.34■■□□□ 1.49
HOMER3-204ENST00000539827 TMEM8AQ9HCN3 771 aa24.34■■□□□ 1.49
HOMER3-204ENST00000539827 SLC5A4Q9NY91 659 aa24.34■■□□□ 1.49
HOMER3-204ENST00000539827 PMM2O15305 246 aa24.33■■□□□ 1.49
HOMER3-204ENST00000539827 PJA2O43164 708 aa24.33■■□□□ 1.49
HOMER3-204ENST00000539827 RRP9O43818 475 aaKnown RBP24.33■■□□□ 1.49
HOMER3-204ENST00000539827 EVI5O60447 810 aa24.33■■□□□ 1.49
HOMER3-204ENST00000539827 MAP2K5Q13163 448 aa24.33■■□□□ 1.49
HOMER3-204ENST00000539827 DUSP28Q4G0W2 176 aa24.33■■□□□ 1.49
HOMER3-204ENST00000539827 ZNF484Q5JVG2 852 aa24.33■■□□□ 1.49
HOMER3-204ENST00000539827 SLFN12LQ6IEE8 588 aa24.33■■□□□ 1.49
HOMER3-204ENST00000539827 MSTO1Q9BUK6 570 aa24.33■■□□□ 1.49
HOMER3-204ENST00000539827 KIAA1586Q9HCI6 787 aa24.33■■□□□ 1.49
HOMER3-204ENST00000539827 MOCS3O95396 460 aa24.33■■□□□ 1.48
HOMER3-204ENST00000539827 HARSP12081 509 aaKnown RBP24.33■■□□□ 1.48
HOMER3-204ENST00000539827 RBM10P98175 930 aaKnown RBP24.33■■□□□ 1.48
HOMER3-204ENST00000539827 ZBTB41Q5SVQ8 909 aa24.33■■□□□ 1.48
HOMER3-204ENST00000539827 CDCA2Q69YH5 1023 aaPredicted RBP24.33■■□□□ 1.48
HOMER3-204ENST00000539827 ZBTB8OSQ8IWT0 167 aa24.33■■□□□ 1.48
HOMER3-204ENST00000539827 MNS1Q8NEH6 495 aa24.33■■□□□ 1.48
HOMER3-204ENST00000539827 CCDC113Q9H0I3 377 aa24.33■■□□□ 1.48
HOMER3-204ENST00000539827 DOCK3Q8IZD9 2030 aa24.32■■□□□ 1.48
HOMER3-204ENST00000539827 ADCY6O43306 1168 aa24.32■■□□□ 1.48
HOMER3-204ENST00000539827 C22orf31O95567 290 aa24.32■■□□□ 1.48
HOMER3-204ENST00000539827 EFNA5P52803 228 aa24.32■■□□□ 1.48
HOMER3-204ENST00000539827 WNT7BP56706 349 aa24.32■■□□□ 1.48
HOMER3-204ENST00000539827 NCBP1Q09161 790 aaKnown RBP24.32■■□□□ 1.48
HOMER3-204ENST00000539827 LMBRD2Q68DH5 695 aaPredicted RBP24.32■■□□□ 1.48
HOMER3-204ENST00000539827 IQSEC1Q6DN90 963 aa24.32■■□□□ 1.48
HOMER3-204ENST00000539827 CRELD2Q6UXH1 353 aaPredicted RBP24.32■■□□□ 1.48
HOMER3-204ENST00000539827 KAT5Q92993 513 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms