RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 INTS8Q75QN2 995 aaKnown RBP16.83■□□□□ 0.28
VAMP1-207ENST00000539047 TAS1R3Q7RTX0 852 aa16.83■□□□□ 0.28
VAMP1-207ENST00000539047 PPP1R13LQ8WUF5 828 aa16.83■□□□□ 0.28
VAMP1-207ENST00000539047 ZNF668Q96K58 619 aaPredicted RBP16.83■□□□□ 0.28
VAMP1-207ENST00000539047 VPS16Q9H269 839 aa16.83■□□□□ 0.28
VAMP1-207ENST00000539047 CNTNAP2Q9UHC6 1331 aa16.83■□□□□ 0.28
VAMP1-207ENST00000539047 GINS2Q9Y248 185 aa16.83■□□□□ 0.28
VAMP1-207ENST00000539047 LGALS16A8MUM7 142 aa16.82■□□□□ 0.28
VAMP1-207ENST00000539047 CLDN3O15551 220 aa16.82■□□□□ 0.28
VAMP1-207ENST00000539047 TPM1P09493 284 aa16.82■□□□□ 0.28
VAMP1-207ENST00000539047 MRPS6P82932 125 aaKnown RBP16.82■□□□□ 0.28
VAMP1-207ENST00000539047 ZNF200P98182 395 aaPredicted RBP16.82■□□□□ 0.28
VAMP1-207ENST00000539047 TMEM62Q0P6H9 643 aa16.82■□□□□ 0.28
VAMP1-207ENST00000539047 PTK7Q13308 1070 aa16.82■□□□□ 0.28
VAMP1-207ENST00000539047 MTFR1Q15390 333 aa16.82■□□□□ 0.28
VAMP1-207ENST00000539047 DCAF17Q5H9S7 520 aaPredicted RBP16.82■□□□□ 0.28
VAMP1-207ENST00000539047 ATF7IP2Q5U623 682 aa16.82■□□□□ 0.28
VAMP1-207ENST00000539047 TCERG1LQ5VWI1 586 aa16.82■□□□□ 0.28
VAMP1-207ENST00000539047 SERINC5Q86VE9 423 aa16.82■□□□□ 0.28
VAMP1-207ENST00000539047 IRF2BP1Q8IU81 584 aa16.82■□□□□ 0.28
VAMP1-207ENST00000539047 GPD1LQ8N335 351 aa16.82■□□□□ 0.28
VAMP1-207ENST00000539047 CCDC155Q8N6L0 562 aa16.82■□□□□ 0.28
VAMP1-207ENST00000539047 ZNF333Q96JL9 665 aa16.82■□□□□ 0.28
VAMP1-207ENST00000539047 ADPGKQ9BRR6 497 aa16.82■□□□□ 0.28
VAMP1-207ENST00000539047 CBWD1Q9BRT8 395 aa16.82■□□□□ 0.28
VAMP1-207ENST00000539047 MSTO1Q9BUK6 570 aa16.82■□□□□ 0.28
VAMP1-207ENST00000539047 TARS2Q9BW92 718 aaKnown RBP16.82■□□□□ 0.28
VAMP1-207ENST00000539047 FZD8Q9H461 694 aa16.82■□□□□ 0.28
VAMP1-207ENST00000539047 PCIF1Q9H4Z3 704 aa16.82■□□□□ 0.28
VAMP1-207ENST00000539047 IFT122Q9HBG6 1241 aa16.82■□□□□ 0.28
VAMP1-207ENST00000539047 DMAC2Q9NW81 257 aa16.82■□□□□ 0.28
VAMP1-207ENST00000539047 OGDHLQ9ULD0 1010 aa16.82■□□□□ 0.28
VAMP1-207ENST00000539047 TRPV2Q9Y5S1 764 aa16.82■□□□□ 0.28
VAMP1-207ENST00000539047 MROH7Q68CQ1 1323 aa16.81■□□□□ 0.28
VAMP1-207ENST00000539047 LRRC10BA6NIK2 292 aa16.81■□□□□ 0.28
VAMP1-207ENST00000539047 ANKRD63C9JTQ0 380 aa16.81■□□□□ 0.28
VAMP1-207ENST00000539047 AP5Z1O43299 807 aa16.81■□□□□ 0.28
VAMP1-207ENST00000539047 STX10O60499 249 aa16.81■□□□□ 0.28
VAMP1-207ENST00000539047 CAND2O75155 1236 aa16.81■□□□□ 0.28
VAMP1-207ENST00000539047 AKAP3O75969 853 aa16.81■□□□□ 0.28
VAMP1-207ENST00000539047 TFRCP02786 760 aaKnown RBP16.81■□□□□ 0.28
VAMP1-207ENST00000539047 CAPN2P17655 700 aa16.81■□□□□ 0.28
VAMP1-207ENST00000539047 CRYBB1P53674 252 aaPredicted RBP16.81■□□□□ 0.28
VAMP1-207ENST00000539047 UBXN1Q04323 297 aa16.81■□□□□ 0.28
VAMP1-207ENST00000539047 NOLC1Q14978 699 aaKnown RBP eCLIP16.81■□□□□ 0.28
VAMP1-207ENST00000539047 KYAT1Q16773 422 aa16.81■□□□□ 0.28
VAMP1-207ENST00000539047 ZNF568Q3ZCX4 644 aa16.81■□□□□ 0.28
VAMP1-207ENST00000539047 VWA3BQ502W6 1294 aa16.81■□□□□ 0.28
VAMP1-207ENST00000539047 MPZL3Q6UWV2 235 aa16.81■□□□□ 0.28
VAMP1-207ENST00000539047 CATSPER4Q7RTX7 472 aa16.81■□□□□ 0.28
VAMP1-207ENST00000539047 ARMC5Q96C12 935 aa16.81■□□□□ 0.28
VAMP1-207ENST00000539047 OSMRQ99650 979 aa16.81■□□□□ 0.28
VAMP1-207ENST00000539047 RTN4Q9NQC3 1192 aaKnown RBP16.81■□□□□ 0.28
VAMP1-207ENST00000539047 AGO2Q9UKV8 859 aaKnown RBP16.81■□□□□ 0.28
VAMP1-207ENST00000539047 TLR3O15455 904 aaKnown RBP16.8■□□□□ 0.28
VAMP1-207ENST00000539047 EXTL3O43909 919 aa16.8■□□□□ 0.28
VAMP1-207ENST00000539047 N4BP1O75113 896 aaKnown RBP16.8■□□□□ 0.28
VAMP1-207ENST00000539047 HARSP12081 509 aaKnown RBP16.8■□□□□ 0.28
VAMP1-207ENST00000539047 DARSP14868 501 aaKnown RBP16.8■□□□□ 0.28
VAMP1-207ENST00000539047 AXLP30530 894 aa16.8■□□□□ 0.28
VAMP1-207ENST00000539047 SNRNP35Q16560 246 aaKnown RBP16.8■□□□□ 0.28
VAMP1-207ENST00000539047 TSHZ1Q6ZSZ6 1077 aa16.8■□□□□ 0.28
VAMP1-207ENST00000539047 TRIM59Q8IWR1 403 aa16.8■□□□□ 0.28
VAMP1-207ENST00000539047 TRIM44Q96DX7 344 aaPredicted RBP16.8■□□□□ 0.28
VAMP1-207ENST00000539047 PCMTD1Q96MG8 357 aaPredicted RBP16.8■□□□□ 0.28
VAMP1-207ENST00000539047 PPP1R9BQ96SB3 815 aa16.8■□□□□ 0.28
VAMP1-207ENST00000539047 ACO2Q99798 780 aaKnown RBP16.8■□□□□ 0.28
VAMP1-207ENST00000539047 CELF4Q9BZC1 486 aaKnown RBP16.8■□□□□ 0.28
VAMP1-207ENST00000539047 IKZF4Q9H2S9 585 aa16.8■□□□□ 0.28
VAMP1-207ENST00000539047 ADAMTS10Q9H324 1103 aa16.8■□□□□ 0.28
VAMP1-207ENST00000539047 NDST4Q9H3R1 872 aa16.8■□□□□ 0.28
VAMP1-207ENST00000539047 TNFSF13BQ9Y275 285 aa16.8■□□□□ 0.28
VAMP1-207ENST00000539047 STYXL1Q9Y6J8 313 aa16.8■□□□□ 0.28
VAMP1-207ENST00000539047 HTTP42858 3142 aa16.8■□□□□ 0.28
VAMP1-207ENST00000539047 ZNF233A6NK53 670 aa16.79■□□□□ 0.28
VAMP1-207ENST00000539047 TISP43B9A030 160 aa16.79■□□□□ 0.28
VAMP1-207ENST00000539047 ARVCFO00192 962 aa16.79■□□□□ 0.28
VAMP1-207ENST00000539047 TULP1O00294 542 aaPredicted RBP16.79■□□□□ 0.28
VAMP1-207ENST00000539047 GPR32O75388 356 aa16.79■□□□□ 0.28
VAMP1-207ENST00000539047 AFPP02771 609 aaKnown RBP16.79■□□□□ 0.28
VAMP1-207ENST00000539047 EIF4BP23588 611 aaKnown RBP16.79■□□□□ 0.28
VAMP1-207ENST00000539047 THPOP40225 353 aa16.79■□□□□ 0.28
VAMP1-207ENST00000539047 CASP4P49662 377 aa16.79■□□□□ 0.28
VAMP1-207ENST00000539047 ENPEPQ07075 957 aa16.79■□□□□ 0.28
VAMP1-207ENST00000539047 BFSP1Q12934 665 aa16.79■□□□□ 0.28
VAMP1-207ENST00000539047 TRIM14Q14142 442 aa16.79■□□□□ 0.28
VAMP1-207ENST00000539047 HIC1Q14526 733 aa16.79■□□□□ 0.28
VAMP1-207ENST00000539047 SLC39A4Q6P5W5 647 aa16.79■□□□□ 0.28
VAMP1-207ENST00000539047 TMC6Q7Z403 805 aa16.79■□□□□ 0.28
VAMP1-207ENST00000539047 RPAINQ86UA6 219 aa16.79■□□□□ 0.28
VAMP1-207ENST00000539047 RDH13Q8NBN7 331 aa16.79■□□□□ 0.28
VAMP1-207ENST00000539047 SPC24Q8NBT2 197 aa16.79■□□□□ 0.28
VAMP1-207ENST00000539047 U2AF1L4Q8WU68 220 aaKnown RBP16.79■□□□□ 0.28
VAMP1-207ENST00000539047 SAAL1Q96ER3 474 aa16.79■□□□□ 0.28
VAMP1-207ENST00000539047 PDLIM2Q96JY6 352 aa16.79■□□□□ 0.28
VAMP1-207ENST00000539047 NAP1L5Q96NT1 182 aaPredicted RBP16.79■□□□□ 0.28
VAMP1-207ENST00000539047 IMPACTQ9P2X3 320 aa16.79■□□□□ 0.28
VAMP1-207ENST00000539047 CDY2AQ9Y6F7 541 aa16.79■□□□□ 0.28
VAMP1-207ENST00000539047 A0A0B4J269 797 aa16.78■□□□□ 0.28
VAMP1-207ENST00000539047 GOLGA8IPA6NC78 632 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms