RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	MYH11	P35749	1972 aa		13.58	□□□□□ -0.24
CLTCL1-205	ENST00000538828	BDP1	A6H8Y1	2624 aa		13.58	□□□□□ -0.24
CLTCL1-205	ENST00000538828		K7ERI5	159 aa		13.57	□□□□□ -0.24
CLTCL1-205	ENST00000538828	PRKCB	P05771	671 aa		13.57	□□□□□ -0.24
CLTCL1-205	ENST00000538828	GALT	P07902	379 aa		13.57	□□□□□ -0.24
CLTCL1-205	ENST00000538828	NASP	P49321	788 aa	Predicted RBP	13.57	□□□□□ -0.24
CLTCL1-205	ENST00000538828	SMTN	P53814	917 aa		13.57	□□□□□ -0.24
CLTCL1-205	ENST00000538828	BCAR1	P56945	870 aa		13.57	□□□□□ -0.24
CLTCL1-205	ENST00000538828	RNASEL	Q05823	741 aa	Known RBP	13.57	□□□□□ -0.24
CLTCL1-205	ENST00000538828	PRPF4B	Q13523	1007 aa	Known RBP	13.57	□□□□□ -0.24
CLTCL1-205	ENST00000538828	SLC39A14	Q15043	492 aa		13.57	□□□□□ -0.24
CLTCL1-205	ENST00000538828	DCAF4L1	Q3SXM0	396 aa		13.57	□□□□□ -0.24
CLTCL1-205	ENST00000538828	MAEA	Q7L5Y9	396 aa		13.57	□□□□□ -0.24
CLTCL1-205	ENST00000538828	DDX53	Q86TM3	631 aa	Known RBP	13.57	□□□□□ -0.24
CLTCL1-205	ENST00000538828	LPP	Q93052	612 aa		13.57	□□□□□ -0.24
CLTCL1-205	ENST00000538828	TMEM169	Q96HH4	297 aa		13.57	□□□□□ -0.24
CLTCL1-205	ENST00000538828	RUSC1	Q9BVN2	902 aa		13.57	□□□□□ -0.24
CLTCL1-205	ENST00000538828	EIF2A	Q9BY44	585 aa	Known RBP	13.57	□□□□□ -0.24
CLTCL1-205	ENST00000538828	LARS	Q9P2J5	1176 aa	Known RBP	13.57	□□□□□ -0.24
CLTCL1-205	ENST00000538828	STK17A	Q9UEE5	414 aa		13.57	□□□□□ -0.24
CLTCL1-205	ENST00000538828	TNFSF13B	Q9Y275	285 aa		13.57	□□□□□ -0.24
CLTCL1-205	ENST00000538828	VCAN	P13611	3396 aa		13.56	□□□□□ -0.24
CLTCL1-205	ENST00000538828	MEIS3P2	A8K0S8	358 aa		13.56	□□□□□ -0.24
CLTCL1-205	ENST00000538828	HIP1R	O75146	1068 aa		13.56	□□□□□ -0.24
CLTCL1-205	ENST00000538828	BRD1	O95696	1058 aa		13.56	□□□□□ -0.24
CLTCL1-205	ENST00000538828	ALDH2	P05091	517 aa		13.56	□□□□□ -0.24
CLTCL1-205	ENST00000538828	PLA2G4B	P0C869	781 aa		13.56	□□□□□ -0.24
CLTCL1-205	ENST00000538828	PLS3	P13797	630 aa		13.56	□□□□□ -0.24
CLTCL1-205	ENST00000538828	NPTX2	P47972	431 aa		13.56	□□□□□ -0.24
CLTCL1-205	ENST00000538828	DSC1	Q08554	894 aa		13.56	□□□□□ -0.24
CLTCL1-205	ENST00000538828	HYAL1	Q12794	435 aa		13.56	□□□□□ -0.24
CLTCL1-205	ENST00000538828	ADAM15	Q13444	863 aa		13.56	□□□□□ -0.24
CLTCL1-205	ENST00000538828	TMEM184A	Q6ZMB5	413 aa		13.56	□□□□□ -0.24
CLTCL1-205	ENST00000538828	IGSF21	Q96ID5	467 aa		13.56	□□□□□ -0.24
CLTCL1-205	ENST00000538828	CPB2	Q96IY4	423 aa		13.56	□□□□□ -0.24
CLTCL1-205	ENST00000538828	CLIC4	Q9Y696	253 aa		13.56	□□□□□ -0.24
CLTCL1-205	ENST00000538828	XIRP2	A4UGR9	3374 aa		13.55	□□□□□ -0.24
CLTCL1-205	ENST00000538828	TDRD15	B5MCY1	1934 aa	Known RBP	13.55	□□□□□ -0.24
CLTCL1-205	ENST00000538828	ARL5C	A6NH57	179 aa		13.55	□□□□□ -0.24
CLTCL1-205	ENST00000538828	B4GALT5	O43286	388 aa		13.55	□□□□□ -0.24
CLTCL1-205	ENST00000538828	ZC3H11A	O75152	810 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
CLTCL1-205	ENST00000538828	PPP6R2	O75170	966 aa		13.55	□□□□□ -0.24
CLTCL1-205	ENST00000538828	NR1I2	O75469	434 aa		13.55	□□□□□ -0.24
CLTCL1-205	ENST00000538828	YEATS4	O95619	227 aa		13.55	□□□□□ -0.24
CLTCL1-205	ENST00000538828	C1R	P00736	705 aa		13.55	□□□□□ -0.24
CLTCL1-205	ENST00000538828	HSP90AA1	P07900	732 aa	Known RBP	13.55	□□□□□ -0.24
CLTCL1-205	ENST00000538828	IBSP	P21815	317 aa	Predicted RBP	13.55	□□□□□ -0.24
CLTCL1-205	ENST00000538828	IRS1	P35568	1242 aa		13.55	□□□□□ -0.24
CLTCL1-205	ENST00000538828	DDIT3	P35638	169 aa		13.55	□□□□□ -0.24
CLTCL1-205	ENST00000538828	TXLNA	P40222	546 aa		13.55	□□□□□ -0.24
CLTCL1-205	ENST00000538828	ZNF131	P52739	623 aa		13.55	□□□□□ -0.24
CLTCL1-205	ENST00000538828	PEX3	P56589	373 aa		13.55	□□□□□ -0.24
CLTCL1-205	ENST00000538828	GRIK3	Q13003	919 aa		13.55	□□□□□ -0.24
CLTCL1-205	ENST00000538828	COLGALT2	Q8IYK4	626 aa		13.55	□□□□□ -0.24
CLTCL1-205	ENST00000538828	MRPL43	Q8N983	215 aa	Known RBP	13.55	□□□□□ -0.24
CLTCL1-205	ENST00000538828	ZNF396	Q96N95	335 aa	Predicted RBP	13.55	□□□□□ -0.24
CLTCL1-205	ENST00000538828	FAM193B	Q96PV7	902 aa	Predicted RBP	13.55	□□□□□ -0.24
CLTCL1-205	ENST00000538828	MRPL4	Q9BYD3	311 aa	Known RBP	13.55	□□□□□ -0.24
CLTCL1-205	ENST00000538828	PDZD7	Q9H5P4	517 aa		13.55	□□□□□ -0.24
CLTCL1-205	ENST00000538828	KMT5A	Q9NQR1	393 aa		13.55	□□□□□ -0.24
CLTCL1-205	ENST00000538828	BLOC1S4	Q9NUP1	217 aa		13.55	□□□□□ -0.24
CLTCL1-205	ENST00000538828	HCST	Q9UBK5	93 aa		13.55	□□□□□ -0.24
CLTCL1-205	ENST00000538828	CCDC39	Q9UFE4	941 aa		13.55	□□□□□ -0.24
CLTCL1-205	ENST00000538828	FBXO2	Q9UK22	296 aa	Predicted RBP	13.55	□□□□□ -0.24
CLTCL1-205	ENST00000538828	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	13.55	□□□□□ -0.24
CLTCL1-205	ENST00000538828	NPTXR	O95502	500 aa		13.54	□□□□□ -0.24
CLTCL1-205	ENST00000538828	EFEMP2	O95967	443 aa		13.54	□□□□□ -0.24
CLTCL1-205	ENST00000538828	SRGAP2B	P0DMP2	458 aa		13.54	□□□□□ -0.24
CLTCL1-205	ENST00000538828	CTSA	P10619	480 aa		13.54	□□□□□ -0.24
CLTCL1-205	ENST00000538828	LTBR	P36941	435 aa		13.54	□□□□□ -0.24
CLTCL1-205	ENST00000538828	ERVFC1	P60507	584 aa		13.54	□□□□□ -0.24
CLTCL1-205	ENST00000538828	TFF2	Q03403	129 aa		13.54	□□□□□ -0.24
CLTCL1-205	ENST00000538828	KCNC3	Q14003	757 aa		13.54	□□□□□ -0.24
CLTCL1-205	ENST00000538828	SMC1A	Q14683	1233 aa	Known RBP	13.54	□□□□□ -0.24
CLTCL1-205	ENST00000538828	DUSP6	Q16828	381 aa		13.54	□□□□□ -0.24
CLTCL1-205	ENST00000538828	ZPBP2	Q6X784	338 aa		13.54	□□□□□ -0.24
CLTCL1-205	ENST00000538828	KRI1	Q8N9T8	703 aa	Known RBP	13.54	□□□□□ -0.24
CLTCL1-205	ENST00000538828	LINC00301	Q8NCQ3	95 aa		13.54	□□□□□ -0.24
CLTCL1-205	ENST00000538828	GSTCD	Q8NEC7	633 aa		13.54	□□□□□ -0.24
CLTCL1-205	ENST00000538828	MICAL1	Q8TDZ2	1067 aa		13.54	□□□□□ -0.24
CLTCL1-205	ENST00000538828	ADAMTS19	Q8TE59	1207 aa		13.54	□□□□□ -0.24
CLTCL1-205	ENST00000538828	LARP4B	Q92615	738 aa	Known RBP	13.54	□□□□□ -0.24
CLTCL1-205	ENST00000538828	RAD54L	Q92698	747 aa		13.54	□□□□□ -0.24
CLTCL1-205	ENST00000538828	USP28	Q96RU2	1077 aa		13.54	□□□□□ -0.24
CLTCL1-205	ENST00000538828	GAD1	Q99259	594 aa		13.54	□□□□□ -0.24
CLTCL1-205	ENST00000538828	ACO2	Q99798	780 aa	Known RBP	13.54	□□□□□ -0.24
CLTCL1-205	ENST00000538828	TLE6	Q9H808	572 aa		13.54	□□□□□ -0.24
CLTCL1-205	ENST00000538828	PTPRH	Q9HD43	1115 aa		13.54	□□□□□ -0.24
CLTCL1-205	ENST00000538828	PRKAG3	Q9UGI9	489 aa		13.54	□□□□□ -0.24
CLTCL1-205	ENST00000538828	SSX2IP	Q9Y2D8	614 aa		13.54	□□□□□ -0.24
CLTCL1-205	ENST00000538828	FAN1	Q9Y2M0	1017 aa		13.54	□□□□□ -0.24
CLTCL1-205	ENST00000538828	SPTBN5	Q9NRC6	3674 aa	Known RBP	13.53	□□□□□ -0.24
CLTCL1-205	ENST00000538828	GRXCR2	A6NFK2	248 aa		13.53	□□□□□ -0.24
CLTCL1-205	ENST00000538828	CCDC169	A6NNP5	214 aa		13.53	□□□□□ -0.24
CLTCL1-205	ENST00000538828	DDHD2	O94830	711 aa		13.53	□□□□□ -0.24
CLTCL1-205	ENST00000538828	ZSCAN22	P10073	491 aa	Predicted RBP	13.53	□□□□□ -0.24
CLTCL1-205	ENST00000538828	HOXB8	P17481	243 aa	Predicted RBP	13.53	□□□□□ -0.24
CLTCL1-205	ENST00000538828	PLCG1	P19174	1290 aa		13.53	□□□□□ -0.24
CLTCL1-205	ENST00000538828	KCNA5	P22460	613 aa		13.53	□□□□□ -0.24
CLTCL1-205	ENST00000538828	PROZ	P22891	400 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms