RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 CXCL10P02778 98 aa18.88■□□□□ 0.61
CLN6-202ENST00000538696 SCP2P22307 547 aa18.88■□□□□ 0.61
CLN6-202ENST00000538696 RFC2P35250 354 aa18.88■□□□□ 0.61
CLN6-202ENST00000538696 RGS19P49795 217 aa18.88■□□□□ 0.61
CLN6-202ENST00000538696 KCNA1Q09470 495 aa18.88■□□□□ 0.61
CLN6-202ENST00000538696 PAK2Q13177 524 aa18.88■□□□□ 0.61
CLN6-202ENST00000538696 CDKAL1Q5VV42 579 aa18.88■□□□□ 0.61
CLN6-202ENST00000538696 CATSPER4Q7RTX7 472 aa18.88■□□□□ 0.61
CLN6-202ENST00000538696 MAP4K3Q8IVH8 894 aa18.88■□□□□ 0.61
CLN6-202ENST00000538696 MYOCDQ8IZQ8 938 aa18.88■□□□□ 0.61
CLN6-202ENST00000538696 USP38Q8NB14 1042 aa18.88■□□□□ 0.61
CLN6-202ENST00000538696 SCFD1Q8WVM8 642 aa18.88■□□□□ 0.61
CLN6-202ENST00000538696 DUSP9Q99956 384 aaKnown RBP18.88■□□□□ 0.61
CLN6-202ENST00000538696 IFNKQ9P0W0 207 aa18.88■□□□□ 0.61
CLN6-202ENST00000538696 TBX20Q9UMR3 447 aa18.88■□□□□ 0.61
CLN6-202ENST00000538696 ST3GAL5Q9UNP4 418 aa18.88■□□□□ 0.61
CLN6-202ENST00000538696 USP20Q9Y2K6 914 aa18.88■□□□□ 0.61
CLN6-202ENST00000538696 CNTNAP2Q9UHC6 1331 aa18.87■□□□□ 0.61
CLN6-202ENST00000538696 ACKR2O00590 384 aa18.87■□□□□ 0.61
CLN6-202ENST00000538696 ERLIN2O94905 339 aa18.87■□□□□ 0.61
CLN6-202ENST00000538696 CSF2RAP15509 400 aa18.87■□□□□ 0.61
CLN6-202ENST00000538696 TPD52L1Q16890 204 aaPredicted RBP18.87■□□□□ 0.61
CLN6-202ENST00000538696 BMT2Q1RMZ1 405 aa18.87■□□□□ 0.61
CLN6-202ENST00000538696 TCTN1Q2MV58 587 aa18.87■□□□□ 0.61
CLN6-202ENST00000538696 STXBP4Q6ZWJ1 553 aa18.87■□□□□ 0.61
CLN6-202ENST00000538696 DEFB128Q7Z7B8 93 aa18.87■□□□□ 0.61
CLN6-202ENST00000538696 TMEM199Q8N511 208 aa18.87■□□□□ 0.61
CLN6-202ENST00000538696 ZNF507Q8TCN5 953 aa18.87■□□□□ 0.61
CLN6-202ENST00000538696 BADQ92934 168 aa18.87■□□□□ 0.61
CLN6-202ENST00000538696 PRIMPOLQ96LW4 560 aa18.87■□□□□ 0.61
CLN6-202ENST00000538696 XPO4Q9C0E2 1151 aaKnown RBP18.87■□□□□ 0.61
CLN6-202ENST00000538696 IKZF4Q9H2S9 585 aa18.87■□□□□ 0.61
CLN6-202ENST00000538696 AGPAT5Q9NUQ2 364 aa18.87■□□□□ 0.61
CLN6-202ENST00000538696 PADI3Q9ULW8 664 aa18.87■□□□□ 0.61
CLN6-202ENST00000538696 PCDHB13Q9Y5F0 798 aa18.87■□□□□ 0.61
CLN6-202ENST00000538696 GPR182O15218 404 aa18.86■□□□□ 0.61
CLN6-202ENST00000538696 ABCD1P33897 745 aa18.86■□□□□ 0.61
CLN6-202ENST00000538696 HOXD13P35453 343 aa18.86■□□□□ 0.61
CLN6-202ENST00000538696 NFX1Q12986 1120 aaKnown RBP18.86■□□□□ 0.61
CLN6-202ENST00000538696 STRN3Q13033 797 aa18.86■□□□□ 0.61
CLN6-202ENST00000538696 PRPF4BQ13523 1007 aaKnown RBP18.86■□□□□ 0.61
CLN6-202ENST00000538696 PCBP1Q15365 356 aaKnown RBP eCLIP18.86■□□□□ 0.61
CLN6-202ENST00000538696 PLEKHG4Q58EX7 1191 aa18.86■□□□□ 0.61
CLN6-202ENST00000538696 ANKRD40Q6AI12 368 aa18.86■□□□□ 0.61
CLN6-202ENST00000538696 CENPPQ6IPU0 288 aa18.86■□□□□ 0.61
CLN6-202ENST00000538696 MRFAP1L1Q96HT8 127 aa18.86■□□□□ 0.61
CLN6-202ENST00000538696 ACCSQ96QU6 501 aa18.86■□□□□ 0.61
CLN6-202ENST00000538696 IFIH1Q9BYX4 1025 aaKnown RBP18.86■□□□□ 0.61
CLN6-202ENST00000538696 TMX1Q9H3N1 280 aa18.86■□□□□ 0.61
CLN6-202ENST00000538696 PTPRSQ13332 1948 aa18.85■□□□□ 0.61
CLN6-202ENST00000538696 BICDL2A1A5D9 508 aa18.85■□□□□ 0.61
CLN6-202ENST00000538696 PIGRP01833 764 aa18.85■□□□□ 0.61
CLN6-202ENST00000538696 ARF4P18085 180 aaPredicted RBP18.85■□□□□ 0.61
CLN6-202ENST00000538696 CDC25BP30305 580 aa18.85■□□□□ 0.61
CLN6-202ENST00000538696 NELFCDQ8IXH7 590 aa18.85■□□□□ 0.61
CLN6-202ENST00000538696 CPB2Q96IY4 423 aa18.85■□□□□ 0.61
CLN6-202ENST00000538696 TARS2Q9BW92 718 aaKnown RBP18.85■□□□□ 0.61
CLN6-202ENST00000538696 MRPL4Q9BYD3 311 aaKnown RBP18.85■□□□□ 0.61
CLN6-202ENST00000538696 PIN4Q9Y237 131 aaKnown RBP18.85■□□□□ 0.61
CLN6-202ENST00000538696 MGEA5O60502 916 aa18.84■□□□□ 0.61
CLN6-202ENST00000538696 SERPINC1P01008 464 aa18.84■□□□□ 0.61
CLN6-202ENST00000538696 CDK11BP21127 795 aaKnown RBP18.84■□□□□ 0.61
CLN6-202ENST00000538696 HOXA11P31270 313 aaPredicted RBP18.84■□□□□ 0.61
CLN6-202ENST00000538696 FPGSQ05932 587 aa18.84■□□□□ 0.61
CLN6-202ENST00000538696 SLC39A4Q6P5W5 647 aa18.84■□□□□ 0.61
CLN6-202ENST00000538696 APTXQ7Z2E3 356 aaKnown RBP18.84■□□□□ 0.61
CLN6-202ENST00000538696 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.84■□□□□ 0.61
CLN6-202ENST00000538696 SPC24Q8NBT2 197 aa18.84■□□□□ 0.61
CLN6-202ENST00000538696 DBF4BQ8NFT6 615 aa18.84■□□□□ 0.61
CLN6-202ENST00000538696 LINC01599Q8WXQ3 324 aa18.84■□□□□ 0.61
CLN6-202ENST00000538696 SEPT8Q92599 483 aa18.84■□□□□ 0.61
CLN6-202ENST00000538696 ACO2Q99798 780 aaKnown RBP18.84■□□□□ 0.61
CLN6-202ENST00000538696 PDZD7Q9H5P4 517 aa18.84■□□□□ 0.61
CLN6-202ENST00000538696 NR2E3Q9Y5X4 410 aa18.84■□□□□ 0.61
CLN6-202ENST00000538696 TISP43B9A030 160 aa18.83■□□□□ 0.61
CLN6-202ENST00000538696 ABLIM1O14639 778 aa18.83■□□□□ 0.61
CLN6-202ENST00000538696 AXLP30530 894 aa18.83■□□□□ 0.61
CLN6-202ENST00000538696 PPIGQ13427 754 aaKnown RBP eCLIP18.83■□□□□ 0.617e-7■□□□□ 9.4
CLN6-202ENST00000538696 DSC3Q14574 896 aa18.83■□□□□ 0.61
CLN6-202ENST00000538696 ZCWPW2Q504Y3 356 aa18.83■□□□□ 0.61
CLN6-202ENST00000538696 ATF7IP2Q5U623 682 aa18.83■□□□□ 0.61
CLN6-202ENST00000538696 EEF1DP3Q658K8 133 aa18.83■□□□□ 0.61
CLN6-202ENST00000538696 ZPBP2Q6X784 338 aa18.83■□□□□ 0.61
CLN6-202ENST00000538696 CDR2LQ86X02 465 aaPredicted RBP18.83■□□□□ 0.61
CLN6-202ENST00000538696 IRF2BP1Q8IU81 584 aa18.83■□□□□ 0.61
CLN6-202ENST00000538696 NOC3LQ8WTT2 800 aaKnown RBP18.83■□□□□ 0.61
CLN6-202ENST00000538696 APBB2Q92870 758 aa18.83■□□□□ 0.61
CLN6-202ENST00000538696 BICD1Q96G01 975 aa18.83■□□□□ 0.61
CLN6-202ENST00000538696 NAP1L5Q96NT1 182 aaPredicted RBP18.83■□□□□ 0.61
CLN6-202ENST00000538696 SRRTQ9BXP5 876 aaKnown RBP18.83■□□□□ 0.61
CLN6-202ENST00000538696 THAP9Q9H5L6 903 aa18.83■□□□□ 0.61
CLN6-202ENST00000538696 TMEM206Q9H813 350 aa18.83■□□□□ 0.61
CLN6-202ENST00000538696 IL23AQ9NPF7 189 aa18.83■□□□□ 0.61
CLN6-202ENST00000538696 INTS13Q9NVM9 706 aa18.83■□□□□ 0.61
CLN6-202ENST00000538696 EXOC7Q9UPT5 735 aa18.83■□□□□ 0.61
CLN6-202ENST00000538696 KCNJ18B7U540 433 aa18.82■□□□□ 0.6
CLN6-202ENST00000538696 ANKRD63C9JTQ0 380 aa18.82■□□□□ 0.6
CLN6-202ENST00000538696 HNRNPDLO14979 420 aaKnown RBP18.82■□□□□ 0.6
CLN6-202ENST00000538696 CBFA2T2O43439 604 aa18.82■□□□□ 0.6
CLN6-202ENST00000538696 PFKMP08237 780 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms