RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 VPS11Q9H270 941 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 ZMYND8Q9ULU4 1186 aaPredicted RBP7.32□□□□□ -1.24
SORT1-209ENST00000538502 G3BP2Q9UN86 482 aaKnown RBP7.32□□□□□ -1.24
SORT1-209ENST00000538502 JAG2Q9Y219 1238 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 ANGPT2O15123 496 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 SRGNP10124 158 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 KCNQ4P56696 695 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 SKOR1P84550 965 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 STX3Q13277 289 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 NR1I3Q14994 352 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 SLC18A3Q16572 532 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 ZCWPW2Q504Y3 356 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 GJC2Q5T442 439 aaPredicted RBP7.32□□□□□ -1.24
SORT1-209ENST00000538502 FAM160B2Q86V87 743 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 CPXCR1Q8N123 301 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 LRRC47Q8N1G4 583 aaKnown RBP7.32□□□□□ -1.24
SORT1-209ENST00000538502 DCAF4Q8WV16 495 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 RNPC3Q96LT9 517 aaKnown RBP7.32□□□□□ -1.24
SORT1-209ENST00000538502 INTS2Q9H0H0 1204 aaKnown RBP7.32□□□□□ -1.24
SORT1-209ENST00000538502 DCLRE1BQ9H816 532 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 ZWILCHQ9H900 591 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 M0R3G1 203 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 ZBTB24O43167 697 aaPredicted RBP7.32□□□□□ -1.24
SORT1-209ENST00000538502 FKBP6O75344 327 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 CYP4A11Q02928 519 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 COASYQ13057 564 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 KYAT1Q16773 422 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 ABCB5Q2M3G0 1257 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 WASHC2DQ5SRD0 308 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 RCSD1Q6JBY9 416 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 ZFRQ96KR1 1074 aaKnown RBP7.32□□□□□ -1.24
SORT1-209ENST00000538502 MAGEB18Q96M61 343 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 PRPF18Q99633 342 aaKnown RBP7.32□□□□□ -1.24
SORT1-209ENST00000538502 GPBP1L1Q9HC44 474 aaPredicted RBP7.32□□□□□ -1.24
SORT1-209ENST00000538502 ERVK-7P63135 1459 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 KAT6BQ8WYB5 2073 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 SAC3D1A6NKF1 404 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 GNPATO15228 680 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 H2AFXP16104 143 aaPredicted RBP7.32□□□□□ -1.24
SORT1-209ENST00000538502 PURAQ00577 322 aaKnown RBP7.32□□□□□ -1.24
SORT1-209ENST00000538502 TTC39BQ5VTQ0 682 aaPredicted RBP7.32□□□□□ -1.24
SORT1-209ENST00000538502 BTNL9Q6UXG8 535 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 CDR2LQ86X02 465 aaPredicted RBP7.32□□□□□ -1.24
SORT1-209ENST00000538502 KCTD17Q8N5Z5 321 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 PPM1NQ8N819 430 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 RAPGEF5Q92565 580 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 TSPAN17Q96FV3 270 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 MRPS26Q9BYN8 205 aaKnown RBP7.32□□□□□ -1.24
SORT1-209ENST00000538502 HDAC6Q9UBN7 1215 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 THRAP3Q9Y2W1 955 aaKnown RBP7.32□□□□□ -1.24
SORT1-209ENST00000538502 ZNF280CQ8ND82 737 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 KRT35Q92764 455 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 FAM20AQ96MK3 541 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 KANSL2Q9H9L4 492 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 RPF1Q9H9Y2 349 aaKnown RBP7.32□□□□□ -1.24
SORT1-209ENST00000538502 GDAQ9Y2T3 454 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 CDY2AQ9Y6F7 541 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 CDY1Q9Y6F8 540 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 CEP170Q5SW79 1584 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 TNPO2O14787 897 aaKnown RBP7.31□□□□□ -1.24
SORT1-209ENST00000538502 ORC4O43929 436 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 LRRC14Q15048 493 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 DLGAP5Q15398 846 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 MFSD14BQ5SR56 506 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 NLRP10Q86W26 655 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 KSR1Q8IVT5 923 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 XXYLT1Q8NBI6 393 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.31□□□□□ -1.24
SORT1-209ENST00000538502 AIPL1Q9NZN9 384 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 CDYLQ9Y232 598 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 PRR23D1E9PI22 279 aaPredicted RBP7.31□□□□□ -1.24
SORT1-209ENST00000538502 NCK2O43639 380 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 PRR23D2P0DMB1 279 aaPredicted RBP7.31□□□□□ -1.24
SORT1-209ENST00000538502 ALAS1P13196 640 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 ALDH18A1P54886 795 aaKnown RBP7.31□□□□□ -1.24
SORT1-209ENST00000538502 CHRNDQ07001 517 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 INAQ16352 499 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 MYLK4Q86YV6 388 aaPredicted RBP7.31□□□□□ -1.24
SORT1-209ENST00000538502 ZNF483Q8TF39 744 aaPredicted RBP7.31□□□□□ -1.24
SORT1-209ENST00000538502 CLMNQ96JQ2 1002 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 EPAS1Q99814 870 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 ADNPQ9H2P0 1102 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 DHX36Q9H2U1 1008 aaKnown RBP7.31□□□□□ -1.24
SORT1-209ENST00000538502 CNGB3Q9NQW8 809 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 ZSWIM5Q9P217 1185 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 KLHL8Q9P2G9 620 aaPredicted RBP7.31□□□□□ -1.24
SORT1-209ENST00000538502 CCDC195A0A1B0GUA6 201 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 KANSL1LA0AUZ9 987 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 SPDYE2BA6NHP3 402 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 A1BGP04217 495 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 SPDYE6P0CI01 402 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 ALX1Q15699 326 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 LRRC24Q50LG9 513 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 SYDE2Q5VT97 1194 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 ARHGAP22Q7Z5H3 698 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 HEXIM2Q96MH2 286 aaKnown RBP7.31□□□□□ -1.24
SORT1-209ENST00000538502 ZIM3Q96PE6 472 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 BRD8Q9H0E9 1235 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 PCIF1Q9H4Z3 704 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 CAB39Q9Y376 341 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms