RNA–Protein interactions for RNA: ENST00000538418.1

CD9-207, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-207ENST00000538418 SLC6A3Q01959 620 aa10.56□□□□□ -0.72
CD9-207ENST00000538418 DSC2Q02487 901 aa10.56□□□□□ -0.72
CD9-207ENST00000538418 DDX10Q13206 875 aaKnown RBP10.56□□□□□ -0.72
CD9-207ENST00000538418 IL10RAQ13651 578 aa10.56□□□□□ -0.72
CD9-207ENST00000538418 TXNRD3Q86VQ6 643 aa10.56□□□□□ -0.72
CD9-207ENST00000538418 PLBD2Q8NHP8 589 aa10.56□□□□□ -0.72
CD9-207ENST00000538418 NT5C1BQ96P26 610 aa10.56□□□□□ -0.72
CD9-207ENST00000538418 ATP13A1Q9HD20 1204 aa10.56□□□□□ -0.72
CD9-207ENST00000538418 NRBP1Q9UHY1 535 aa10.56□□□□□ -0.72
CD9-207ENST00000538418 CPS1P31327 1500 aa10.56□□□□□ -0.72
CD9-207ENST00000538418 KDM5DQ9BY66 1539 aa10.56□□□□□ -0.72
CD9-207ENST00000538418 MYPNQ86TC9 1320 aa10.56□□□□□ -0.72
CD9-207ENST00000538418 MED14O60244 1454 aa10.55□□□□□ -0.72
CD9-207ENST00000538418 MAP3K1Q13233 1512 aa10.55□□□□□ -0.72
CD9-207ENST00000538418 ACOT7O00154 380 aa10.55□□□□□ -0.72
CD9-207ENST00000538418 EPB41L2O43491 1005 aaKnown RBP10.55□□□□□ -0.72
CD9-207ENST00000538418 ARHGEF15O94989 841 aa10.55□□□□□ -0.72
CD9-207ENST00000538418 TECP42680 631 aa10.55□□□□□ -0.72
CD9-207ENST00000538418 MAPK10P53779 464 aa10.55□□□□□ -0.72
CD9-207ENST00000538418 PPFIA1Q13136 1202 aa10.55□□□□□ -0.72
CD9-207ENST00000538418 TBX2Q13207 712 aaPredicted RBP10.55□□□□□ -0.72
CD9-207ENST00000538418 BLMHQ13867 455 aa10.55□□□□□ -0.72
CD9-207ENST00000538418 L1TD1Q5T7N2 865 aaKnown RBP10.55□□□□□ -0.72
CD9-207ENST00000538418 THEMIS2Q5TEJ8 643 aa10.55□□□□□ -0.72
CD9-207ENST00000538418 KAT5Q92993 513 aa10.55□□□□□ -0.72
CD9-207ENST00000538418 MFSD14AQ96MC6 490 aa10.55□□□□□ -0.72
CD9-207ENST00000538418 PTPN18Q99952 460 aa10.55□□□□□ -0.72
CD9-207ENST00000538418 G6PC3Q9BUM1 346 aa10.55□□□□□ -0.72
CD9-207ENST00000538418 C7orf69Q9H7B7 122 aa10.55□□□□□ -0.72
CD9-207ENST00000538418 ZMAT3Q9HA38 289 aaKnown RBP10.55□□□□□ -0.72
CD9-207ENST00000538418 ARHGEF5Q12774 1597 aa10.55□□□□□ -0.72
CD9-207ENST00000538418 PITPNM2Q9BZ72 1349 aa10.55□□□□□ -0.72
CD9-207ENST00000538418 CAMSAP2Q08AD1 1489 aa10.55□□□□□ -0.72
CD9-207ENST00000538418 SHANK2Q9UPX8 1470 aa10.55□□□□□ -0.72
CD9-207ENST00000538418 DNMT1P26358 1616 aaKnown RBP10.55□□□□□ -0.72
CD9-207ENST00000538418 MYO3AQ8NEV4 1616 aa10.55□□□□□ -0.72
CD9-207ENST00000538418 A0A1W2PQ27 194 aa10.54□□□□□ -0.72
CD9-207ENST00000538418 A0A1W2PQ64 194 aa10.54□□□□□ -0.72
CD9-207ENST00000538418 A0A1W2PQC6 194 aa10.54□□□□□ -0.72
CD9-207ENST00000538418 A0A1W2PQD8 194 aa10.54□□□□□ -0.72
CD9-207ENST00000538418 PRAMEF22A3QJZ6 481 aa10.54□□□□□ -0.72
CD9-207ENST00000538418 M0R3H8 397 aa10.54□□□□□ -0.72
CD9-207ENST00000538418 SLC16A6O15403 523 aa10.54□□□□□ -0.72
CD9-207ENST00000538418 GMPRP36959 345 aa10.54□□□□□ -0.72
CD9-207ENST00000538418 ROM1Q03395 351 aa10.54□□□□□ -0.72
CD9-207ENST00000538418 PPARAQ07869 468 aa10.54□□□□□ -0.72
CD9-207ENST00000538418 MUM1L1Q5H9M0 696 aa10.54□□□□□ -0.72
CD9-207ENST00000538418 DACT2Q5SW24 774 aa10.54□□□□□ -0.72
CD9-207ENST00000538418 HYIQ5T013 277 aa10.54□□□□□ -0.72
CD9-207ENST00000538418 PRAMEF18Q5VWM3 479 aa10.54□□□□□ -0.72
CD9-207ENST00000538418 SLFN12LQ6IEE8 588 aa10.54□□□□□ -0.72
CD9-207ENST00000538418 MIGA2Q7L4E1 593 aa10.54□□□□□ -0.72
CD9-207ENST00000538418 BRI3BPQ8WY22 251 aa10.54□□□□□ -0.72
CD9-207ENST00000538418 DPF2Q92785 391 aa10.54□□□□□ -0.72
CD9-207ENST00000538418 SYTL4Q96C24 671 aaPredicted RBP10.54□□□□□ -0.72
CD9-207ENST00000538418 ASIC4Q96FT7 647 aa10.54□□□□□ -0.72
CD9-207ENST00000538418 FOXB1Q99853 325 aa10.54□□□□□ -0.72
CD9-207ENST00000538418 EIF2AK1Q9BQI3 630 aaKnown RBP10.54□□□□□ -0.72
CD9-207ENST00000538418 ARMT1Q9H993 441 aa10.54□□□□□ -0.72
CD9-207ENST00000538418 KIAA1586Q9HCI6 787 aa10.54□□□□□ -0.72
CD9-207ENST00000538418 PCDHB4Q9Y5E5 795 aa10.54□□□□□ -0.72
CD9-207ENST00000538418 PCDHGB2Q9Y5G2 931 aa10.54□□□□□ -0.72
CD9-207ENST00000538418 SLC4A7Q9Y6M7 1214 aa10.54□□□□□ -0.72
CD9-207ENST00000538418 LRRC9Q6ZRR7 1453 aa10.54□□□□□ -0.72
CD9-207ENST00000538418 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.53□□□□□ -0.72
CD9-207ENST00000538418 MYOM3Q5VTT5 1437 aa10.53□□□□□ -0.72
CD9-207ENST00000538418 VPS8Q8N3P4 1428 aa10.53□□□□□ -0.72
CD9-207ENST00000538418 POM121BA6NF01 834 aa10.53□□□□□ -0.72
CD9-207ENST00000538418 ADAMTS3O15072 1205 aa10.53□□□□□ -0.72
CD9-207ENST00000538418 PCDH8O95206 1070 aa10.53□□□□□ -0.72
CD9-207ENST00000538418 MCAMP43121 646 aa10.53□□□□□ -0.72
CD9-207ENST00000538418 PPP4R3AQ6IN85 833 aa10.53□□□□□ -0.72
CD9-207ENST00000538418 PGBD2Q6P3X8 592 aa10.53□□□□□ -0.72
CD9-207ENST00000538418 SEC14L1Q92503 715 aa10.53□□□□□ -0.72
CD9-207ENST00000538418 TMEM41AQ96HV5 264 aa10.53□□□□□ -0.72
CD9-207ENST00000538418 NEUROD6Q96NK8 337 aa10.53□□□□□ -0.72
CD9-207ENST00000538418 ADI1Q9BV57 179 aa10.53□□□□□ -0.72
CD9-207ENST00000538418 RRN3Q9NYV6 651 aa10.53□□□□□ -0.72
CD9-207ENST00000538418 SCOCQ9UIL1 159 aa10.53□□□□□ -0.72
CD9-207ENST00000538418 SNX11Q9Y5W9 270 aa10.53□□□□□ -0.72
CD9-207ENST00000538418 LRRFIP2Q9Y608 721 aaKnown RBP10.53□□□□□ -0.72
CD9-207ENST00000538418 PHGDHO43175 533 aaKnown RBP10.52□□□□□ -0.73
CD9-207ENST00000538418 FGF18O76093 207 aa10.52□□□□□ -0.73
CD9-207ENST00000538418 F13BP05160 661 aa10.52□□□□□ -0.73
CD9-207ENST00000538418 RPLP2P05387 115 aaKnown RBP10.52□□□□□ -0.73
CD9-207ENST00000538418 CELA3BP08861 270 aa10.52□□□□□ -0.73
CD9-207ENST00000538418 TACR1P25103 407 aa10.52□□□□□ -0.73
CD9-207ENST00000538418 KIR2DL1P43626 348 aaPredicted RBP10.52□□□□□ -0.73
CD9-207ENST00000538418 KIR2DL2P43627 348 aaPredicted RBP10.52□□□□□ -0.73
CD9-207ENST00000538418 GRIN1Q05586 938 aa10.52□□□□□ -0.73
CD9-207ENST00000538418 FGL2Q14314 439 aa10.52□□□□□ -0.73
CD9-207ENST00000538418 HIBCHQ6NVY1 386 aaPredicted RBP10.52□□□□□ -0.73
CD9-207ENST00000538418 TTC7BQ86TV6 843 aa10.52□□□□□ -0.73
CD9-207ENST00000538418 SYTL1Q8IYJ3 562 aa10.52□□□□□ -0.73
CD9-207ENST00000538418 ANKS1AQ92625 1134 aa10.52□□□□□ -0.73
CD9-207ENST00000538418 ZC3H10Q96K80 434 aaKnown RBP10.52□□□□□ -0.73
CD9-207ENST00000538418 GREM2Q9H772 168 aa10.52□□□□□ -0.73
CD9-207ENST00000538418 IMPACTQ9P2X3 320 aa10.52□□□□□ -0.73
CD9-207ENST00000538418 DENND2AQ9ULE3 1009 aa10.52□□□□□ -0.73
CD9-207ENST00000538418 USP18Q9UMW8 372 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms