RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 OTUD6AQ7L8S5 288 aa11.67□□□□□ -0.54
CLIP1-210ENST00000538120 ZNF571Q7Z3V5 609 aaPredicted RBP11.67□□□□□ -0.54
CLIP1-210ENST00000538120 PLEKHO2Q8TD55 490 aa11.67□□□□□ -0.54
CLIP1-210ENST00000538120 KIFC3Q9BVG8 833 aa11.67□□□□□ -0.54
CLIP1-210ENST00000538120 ASCC2Q9H1I8 757 aaPredicted RBP11.67□□□□□ -0.54
CLIP1-210ENST00000538120 MED4Q9NPJ6 270 aa11.67□□□□□ -0.54
CLIP1-210ENST00000538120 XPNPEP1Q9NQW7 623 aa11.67□□□□□ -0.54
CLIP1-210ENST00000538120 GRXCR2A6NFK2 248 aa11.66□□□□□ -0.54
CLIP1-210ENST00000538120 ANKRD63C9JTQ0 380 aa11.66□□□□□ -0.54
CLIP1-210ENST00000538120 MOCS3O95396 460 aa11.66□□□□□ -0.54
CLIP1-210ENST00000538120 SUPT20HL2P0C7V6 817 aa11.66□□□□□ -0.54
CLIP1-210ENST00000538120 EPHX2P34913 555 aa11.66□□□□□ -0.54
CLIP1-210ENST00000538120 MCCD1P59942 119 aaPredicted RBP11.66□□□□□ -0.54
CLIP1-210ENST00000538120 MRPS25P82663 173 aaKnown RBP11.66□□□□□ -0.54
CLIP1-210ENST00000538120 PRKCEQ02156 737 aa11.66□□□□□ -0.54
CLIP1-210ENST00000538120 PTK2Q05397 1052 aa11.66□□□□□ -0.54
CLIP1-210ENST00000538120 ANKRD13CQ8N6S4 541 aa11.66□□□□□ -0.54
CLIP1-210ENST00000538120 LMO3Q8TAP4 145 aa11.66□□□□□ -0.54
CLIP1-210ENST00000538120 NTPCRQ9BSD7 190 aaKnown RBP11.66□□□□□ -0.54
CLIP1-210ENST00000538120 KDM4CQ9H3R0 1056 aa11.66□□□□□ -0.54
CLIP1-210ENST00000538120 HSPBP1Q9NZL4 362 aa11.66□□□□□ -0.54
CLIP1-210ENST00000538120 FBXO40Q9UH90 709 aa11.66□□□□□ -0.54
CLIP1-210ENST00000538120 MYH11P35749 1972 aa11.66□□□□□ -0.54
CLIP1-210ENST00000538120 SYNGAP1Q96PV0 1343 aa11.66□□□□□ -0.54
CLIP1-210ENST00000538120 IGSF9BQ9UPX0 1349 aa11.66□□□□□ -0.54
CLIP1-210ENST00000538120 ADSSP30520 456 aa11.66□□□□□ -0.54
CLIP1-210ENST00000538120 GGCXP38435 758 aa11.66□□□□□ -0.54
CLIP1-210ENST00000538120 PRKCIP41743 596 aa11.66□□□□□ -0.54
CLIP1-210ENST00000538120 ENOX2Q16206 610 aaKnown RBP11.66□□□□□ -0.54
CLIP1-210ENST00000538120 CYFIP1Q7L576 1253 aa11.66□□□□□ -0.54
CLIP1-210ENST00000538120 OLIG1Q8TAK6 271 aa11.66□□□□□ -0.54
CLIP1-210ENST00000538120 SPIRE2Q8WWL2 714 aa11.66□□□□□ -0.54
CLIP1-210ENST00000538120 SPAG5Q96R06 1193 aa11.66□□□□□ -0.54
CLIP1-210ENST00000538120 GPR88Q9GZN0 384 aa11.66□□□□□ -0.54
CLIP1-210ENST00000538120 TXNRD2Q9NNW7 524 aa11.66□□□□□ -0.54
CLIP1-210ENST00000538120 ADAMTS1Q9UHI8 967 aa11.66□□□□□ -0.54
CLIP1-210ENST00000538120 TBX20Q9UMR3 447 aa11.66□□□□□ -0.54
CLIP1-210ENST00000538120 NENFQ9UMX5 172 aa11.66□□□□□ -0.54
CLIP1-210ENST00000538120 KIAA1217Q5T5P2 1943 aa11.66□□□□□ -0.54
CLIP1-210ENST00000538120 ANO9A1A5B4 782 aa11.65□□□□□ -0.54
CLIP1-210ENST00000538120 AGPSO00116 658 aa11.65□□□□□ -0.54
CLIP1-210ENST00000538120 DKC1O60832 514 aaKnown RBP eCLIP11.65□□□□□ -0.54
CLIP1-210ENST00000538120 AARSP49588 968 aaKnown RBP eCLIP11.65□□□□□ -0.54
CLIP1-210ENST00000538120 C2orf54Q08AI8 447 aa11.65□□□□□ -0.54
CLIP1-210ENST00000538120 MIS18BP1Q6P0N0 1132 aa11.65□□□□□ -0.54
CLIP1-210ENST00000538120 SEPT14Q6ZU15 432 aa11.65□□□□□ -0.54
CLIP1-210ENST00000538120 NCAPG2Q86XI2 1143 aa11.65□□□□□ -0.54
CLIP1-210ENST00000538120 NME8Q8N427 588 aa11.65□□□□□ -0.54
CLIP1-210ENST00000538120 CEP120Q8N960 986 aa11.65□□□□□ -0.54
CLIP1-210ENST00000538120 AFAP1L1Q8TED9 768 aa11.65□□□□□ -0.54
CLIP1-210ENST00000538120 COG1Q8WTW3 980 aa11.65□□□□□ -0.54
CLIP1-210ENST00000538120 PAGR1Q9BTK6 254 aa11.65□□□□□ -0.54
CLIP1-210ENST00000538120 INTS2Q9H0H0 1204 aaKnown RBP11.65□□□□□ -0.54
CLIP1-210ENST00000538120 CYP26B1Q9NR63 512 aa11.65□□□□□ -0.54
CLIP1-210ENST00000538120 RBPJLQ9UBG7 517 aa11.65□□□□□ -0.54
CLIP1-210ENST00000538120 AGTPBP1Q9UPW5 1226 aa11.65□□□□□ -0.54
CLIP1-210ENST00000538120 PCDHGA10Q9Y5H3 936 aa11.65□□□□□ -0.54
CLIP1-210ENST00000538120 MAFBQ9Y5Q3 323 aaPredicted RBP11.65□□□□□ -0.54
CLIP1-210ENST00000538120 ADGRA3Q8IWK6 1321 aa11.65□□□□□ -0.54
CLIP1-210ENST00000538120 CCDC169A6NNP5 214 aa11.65□□□□□ -0.54
CLIP1-210ENST00000538120 NOP2P46087 812 aaKnown RBP11.65□□□□□ -0.54
CLIP1-210ENST00000538120 SNRPFP62306 86 aaKnown RBP11.65□□□□□ -0.54
CLIP1-210ENST00000538120 PPP3CAQ08209 521 aa11.65□□□□□ -0.54
CLIP1-210ENST00000538120 PPIL2Q13356 520 aa11.65□□□□□ -0.54
CLIP1-210ENST00000538120 Q3C1V9 767 aa11.65□□□□□ -0.54
CLIP1-210ENST00000538120 GPAT2Q6NUI2 795 aa11.65□□□□□ -0.54
CLIP1-210ENST00000538120 SLC39A4Q6P5W5 647 aa11.65□□□□□ -0.54
CLIP1-210ENST00000538120 PACS2Q86VP3 889 aa11.65□□□□□ -0.54
CLIP1-210ENST00000538120 MAP4K3Q8IVH8 894 aa11.65□□□□□ -0.54
CLIP1-210ENST00000538120 XXYLT1Q8NBI6 393 aa11.65□□□□□ -0.54
CLIP1-210ENST00000538120 SLC17A8Q8NDX2 589 aa11.65□□□□□ -0.54
CLIP1-210ENST00000538120 TRIM58Q8NG06 486 aa11.65□□□□□ -0.54
CLIP1-210ENST00000538120 KIFAP3Q92845 792 aa11.65□□□□□ -0.54
CLIP1-210ENST00000538120 FGD4Q96M96 766 aa11.65□□□□□ -0.54
CLIP1-210ENST00000538120 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.65□□□□□ -0.54
CLIP1-210ENST00000538120 PACSIN1Q9BY11 444 aa11.65□□□□□ -0.54
CLIP1-210ENST00000538120 DOCK5Q9H7D0 1870 aa11.65□□□□□ -0.54
CLIP1-210ENST00000538120 SEPT9Q9UHD8 586 aaPredicted RBP11.65□□□□□ -0.54
CLIP1-210ENST00000538120 IGKV6D-21A0A0A0MT36 114 aa11.64□□□□□ -0.55
CLIP1-210ENST00000538120 SOCS7O14512 581 aa11.64□□□□□ -0.55
CLIP1-210ENST00000538120 TACC1O75410 805 aa11.64□□□□□ -0.55
CLIP1-210ENST00000538120 DGAT1O75907 488 aa11.64□□□□□ -0.55
CLIP1-210ENST00000538120 TUBBP07437 444 aa11.64□□□□□ -0.55
CLIP1-210ENST00000538120 ADRB2P07550 413 aa11.64□□□□□ -0.55
CLIP1-210ENST00000538120 GJA5P36382 358 aa11.64□□□□□ -0.55
CLIP1-210ENST00000538120 VAMP7P51809 220 aa11.64□□□□□ -0.55
CLIP1-210ENST00000538120 MYL7Q01449 175 aa11.64□□□□□ -0.55
CLIP1-210ENST00000538120 XKR3Q5GH77 459 aa11.64□□□□□ -0.55
CLIP1-210ENST00000538120 INTS8Q75QN2 995 aaKnown RBP11.64□□□□□ -0.55
CLIP1-210ENST00000538120 HVCN1Q96D96 273 aa11.64□□□□□ -0.55
CLIP1-210ENST00000538120 CEP89Q96ST8 783 aa11.64□□□□□ -0.55
CLIP1-210ENST00000538120 PCYT2Q99447 389 aa11.64□□□□□ -0.55
CLIP1-210ENST00000538120 ACBD3Q9H3P7 528 aa11.64□□□□□ -0.55
CLIP1-210ENST00000538120 RABEP2Q9H5N1 569 aa11.64□□□□□ -0.55
CLIP1-210ENST00000538120 VIPAS39Q9H9C1 493 aa11.64□□□□□ -0.55
CLIP1-210ENST00000538120 C17orf75Q9HAS0 396 aa11.64□□□□□ -0.55
CLIP1-210ENST00000538120 KMT5AQ9NQR1 393 aa11.64□□□□□ -0.55
CLIP1-210ENST00000538120 DNAJC12Q9UKB3 198 aa11.64□□□□□ -0.55
CLIP1-210ENST00000538120 EMSYQ7Z589 1322 aa11.64□□□□□ -0.55
CLIP1-210ENST00000538120 GSTTP1A0A1W2PQM5 241 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms