RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 UTP11Q9Y3A2 253 aaKnown RBP9.39□□□□□ -0.91
UBE3B-208ENST00000538070 MYH11P35749 1972 aa9.39□□□□□ -0.91
UBE3B-208ENST00000538070 SRGAP2CP0DJJ0 459 aa9.39□□□□□ -0.91
UBE3B-208ENST00000538070 PRKCEQ02156 737 aa9.39□□□□□ -0.91
UBE3B-208ENST00000538070 TTMPQ5BVD1 217 aa9.39□□□□□ -0.91
UBE3B-208ENST00000538070 PCNX4Q63HM2 1172 aa9.39□□□□□ -0.91
UBE3B-208ENST00000538070 EMBQ6PCB8 327 aa9.39□□□□□ -0.91
UBE3B-208ENST00000538070 NOP9Q86U38 636 aaKnown RBP9.39□□□□□ -0.91
UBE3B-208ENST00000538070 NT5DC3Q86UY8 548 aa9.39□□□□□ -0.91
UBE3B-208ENST00000538070 CCDC105Q8IYK2 499 aa9.39□□□□□ -0.91
UBE3B-208ENST00000538070 TAB3Q8N5C8 712 aaPredicted RBP9.39□□□□□ -0.91
UBE3B-208ENST00000538070 TRPM4Q8TD43 1214 aa9.39□□□□□ -0.91
UBE3B-208ENST00000538070 HEMGNQ9BXL5 484 aa9.39□□□□□ -0.91
UBE3B-208ENST00000538070 NEUROG2Q9H2A3 272 aa9.39□□□□□ -0.91
UBE3B-208ENST00000538070 FBXL5Q9UKA1 691 aa9.39□□□□□ -0.91
UBE3B-208ENST00000538070 NFKBIEO00221 500 aa9.38□□□□□ -0.91
UBE3B-208ENST00000538070 ZNF862O60290 1169 aa9.38□□□□□ -0.91
UBE3B-208ENST00000538070 CTNND1O60716 968 aaKnown RBP9.38□□□□□ -0.91
UBE3B-208ENST00000538070 GJB6O95452 261 aa9.38□□□□□ -0.91
UBE3B-208ENST00000538070 CD58P19256 250 aa9.38□□□□□ -0.91
UBE3B-208ENST00000538070 BACE1P56817 501 aa9.38□□□□□ -0.91
UBE3B-208ENST00000538070 JAM2P57087 298 aa9.38□□□□□ -0.91
UBE3B-208ENST00000538070 KRT71Q3SY84 523 aa9.38□□□□□ -0.91
UBE3B-208ENST00000538070 OTUD6AQ7L8S5 288 aa9.38□□□□□ -0.91
UBE3B-208ENST00000538070 CCDC60Q8IWA6 550 aaPredicted RBP9.38□□□□□ -0.91
UBE3B-208ENST00000538070 CCDC26Q8TAB7 109 aa9.38□□□□□ -0.91
UBE3B-208ENST00000538070 ALG3Q92685 438 aa9.38□□□□□ -0.91
UBE3B-208ENST00000538070 ZBTB10Q96DT7 871 aa9.38□□□□□ -0.91
UBE3B-208ENST00000538070 BORCS6Q96GS4 357 aa9.38□□□□□ -0.91
UBE3B-208ENST00000538070 PBKQ96KB5 322 aa9.38□□□□□ -0.91
UBE3B-208ENST00000538070 NT5C1BQ96P26 610 aa9.38□□□□□ -0.91
UBE3B-208ENST00000538070 NUP85Q9BW27 656 aa9.38□□□□□ -0.91
UBE3B-208ENST00000538070 UBIAD1Q9Y5Z9 338 aa9.38□□□□□ -0.91
UBE3B-208ENST00000538070 GOLGA6L10A0A0M3HER8 536 aa9.38□□□□□ -0.91
UBE3B-208ENST00000538070 COMTP21964 271 aa9.38□□□□□ -0.91
UBE3B-208ENST00000538070 PPFIA1Q13136 1202 aa9.38□□□□□ -0.91
UBE3B-208ENST00000538070 C10orf76Q5T2E6 689 aa9.38□□□□□ -0.91
UBE3B-208ENST00000538070 DPY19L2P1Q6NXN4 242 aa9.38□□□□□ -0.91
UBE3B-208ENST00000538070 TAX1BP1Q86VP1 789 aa9.38□□□□□ -0.91
UBE3B-208ENST00000538070 LPAR1Q92633 364 aa9.38□□□□□ -0.91
UBE3B-208ENST00000538070 C18orf8Q96DM3 657 aa9.38□□□□□ -0.91
UBE3B-208ENST00000538070 TEPSINQ96N21 525 aa9.38□□□□□ -0.91
UBE3B-208ENST00000538070 PCDHB18PQ96TA0 734 aa9.38□□□□□ -0.91
UBE3B-208ENST00000538070 TRIM7Q9C029 511 aa9.38□□□□□ -0.91
UBE3B-208ENST00000538070 KIAA1683Q9H0B3 1180 aa9.38□□□□□ -0.91
UBE3B-208ENST00000538070 ERVK-5Q9HDB9 667 aa9.38□□□□□ -0.91
UBE3B-208ENST00000538070 KLHL11Q9NVR0 708 aa9.38□□□□□ -0.91
UBE3B-208ENST00000538070 NDUFAB1O14561 156 aa9.38□□□□□ -0.91
UBE3B-208ENST00000538070 CSDE1O75534 798 aaKnown RBP9.38□□□□□ -0.91
UBE3B-208ENST00000538070 ADSSP30520 456 aa9.38□□□□□ -0.91
UBE3B-208ENST00000538070 SEC24CP53992 1094 aa9.38□□□□□ -0.91
UBE3B-208ENST00000538070 ADCY1Q08828 1119 aa9.38□□□□□ -0.91
UBE3B-208ENST00000538070 MKRN3Q13064 507 aaKnown RBP9.38□□□□□ -0.91
UBE3B-208ENST00000538070 TMEM132BQ14DG7 1078 aa9.38□□□□□ -0.91
UBE3B-208ENST00000538070 LRRC57Q8N9N7 239 aa9.38□□□□□ -0.91
UBE3B-208ENST00000538070 NSUN6Q8TEA1 469 aaKnown RBP9.38□□□□□ -0.91
UBE3B-208ENST00000538070 C1orf54Q8WWF1 131 aa9.38□□□□□ -0.91
UBE3B-208ENST00000538070 MOV10L1Q9BXT6 1211 aaKnown RBP9.38□□□□□ -0.91
UBE3B-208ENST00000538070 TAF1DQ9H5J8 278 aaPredicted RBP9.38□□□□□ -0.91
UBE3B-208ENST00000538070 JPH1Q9HDC5 661 aaPredicted RBP9.38□□□□□ -0.91
UBE3B-208ENST00000538070 EXOC7Q9UPT5 735 aa9.38□□□□□ -0.91
UBE3B-208ENST00000538070 ARFGEF1Q9Y6D6 1849 aa9.38□□□□□ -0.91
UBE3B-208ENST00000538070 PDE6CP51160 858 aa9.37□□□□□ -0.91
UBE3B-208ENST00000538070 ZNF131P52739 623 aa9.37□□□□□ -0.91
UBE3B-208ENST00000538070 ACTR2P61160 394 aa9.37□□□□□ -0.91
UBE3B-208ENST00000538070 IGBP1P78318 339 aa9.37□□□□□ -0.91
UBE3B-208ENST00000538070 KRT76Q01546 638 aa9.37□□□□□ -0.91
UBE3B-208ENST00000538070 STRN3Q13033 797 aa9.37□□□□□ -0.91
UBE3B-208ENST00000538070 RNF187Q5TA31 235 aaPredicted RBP9.37□□□□□ -0.91
UBE3B-208ENST00000538070 DCAF15Q66K64 600 aa9.37□□□□□ -0.91
UBE3B-208ENST00000538070 SCARA5Q6ZMJ2 495 aa9.37□□□□□ -0.91
UBE3B-208ENST00000538070 MOB2Q70IA6 237 aa9.37□□□□□ -0.91
UBE3B-208ENST00000538070 DEPTORQ8TB45 409 aa9.37□□□□□ -0.91
UBE3B-208ENST00000538070 SLC9A2Q9UBY0 812 aa9.37□□□□□ -0.91
UBE3B-208ENST00000538070 TCRBV7S2A1N4TA0A589 114 aa9.37□□□□□ -0.91
UBE3B-208ENST00000538070 ZNF233A6NK53 670 aa9.37□□□□□ -0.91
UBE3B-208ENST00000538070 PTPRAP18433 802 aa9.37□□□□□ -0.91
UBE3B-208ENST00000538070 PRKCIP41743 596 aa9.37□□□□□ -0.91
UBE3B-208ENST00000538070 MFAP3P55082 362 aa9.37□□□□□ -0.91
UBE3B-208ENST00000538070 GPC5P78333 572 aa9.37□□□□□ -0.91
UBE3B-208ENST00000538070 DR1Q01658 176 aa9.37□□□□□ -0.91
UBE3B-208ENST00000538070 PPP2R5AQ15172 486 aa9.37□□□□□ -0.91
UBE3B-208ENST00000538070 PPP1R7Q15435 360 aa9.37□□□□□ -0.91
UBE3B-208ENST00000538070 FAM182AQ5T1J6 154 aa9.37□□□□□ -0.91
UBE3B-208ENST00000538070 SV2AQ7L0J3 742 aa9.37□□□□□ -0.91
UBE3B-208ENST00000538070 ZC3H3Q8IXZ2 948 aaKnown RBP9.37□□□□□ -0.91
UBE3B-208ENST00000538070 ATP6V0A1Q93050 837 aa9.37□□□□□ -0.91
UBE3B-208ENST00000538070 MRRFQ96E11 262 aaKnown RBP9.37□□□□□ -0.91
UBE3B-208ENST00000538070 CCDC114Q96M63 670 aa9.37□□□□□ -0.91
UBE3B-208ENST00000538070 KREMEN1Q96MU8 473 aa9.37□□□□□ -0.91
UBE3B-208ENST00000538070 MKNK1Q9BUB5 465 aa9.37□□□□□ -0.91
UBE3B-208ENST00000538070 TARS2Q9BW92 718 aaKnown RBP9.37□□□□□ -0.91
UBE3B-208ENST00000538070 VIPAS39Q9H9C1 493 aa9.37□□□□□ -0.91
UBE3B-208ENST00000538070 A1CFQ9NQ94 594 aaKnown RBP9.37□□□□□ -0.91
UBE3B-208ENST00000538070 DMAC2Q9NW81 257 aa9.37□□□□□ -0.91
UBE3B-208ENST00000538070 RNF14Q9UBS8 474 aa9.37□□□□□ -0.91
UBE3B-208ENST00000538070 GINS2Q9Y248 185 aa9.37□□□□□ -0.91
UBE3B-208ENST00000538070 RRP15Q9Y3B9 282 aaKnown RBP9.37□□□□□ -0.91
UBE3B-208ENST00000538070 CENPFP49454 3210 aa9.37□□□□□ -0.91
UBE3B-208ENST00000538070 ANKRD62A6NC57 917 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms