RNA–Protein interactions for RNA: ENST00000537925.5

SNHG1-206, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,487 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-206ENST00000537925 FAM102BQ5T8I3 360 aa12.65□□□□□ -0.38
SNHG1-206ENST00000537925 VSTM4Q8IW00 320 aa12.65□□□□□ -0.38
SNHG1-206ENST00000537925 DAW1Q8N136 415 aa12.65□□□□□ -0.38
SNHG1-206ENST00000537925 ENOX1Q8TC92 643 aaKnown RBP12.65□□□□□ -0.38
SNHG1-206ENST00000537925 BSNDQ8WZ55 320 aa12.65□□□□□ -0.38
SNHG1-206ENST00000537925 KIFAP3Q92845 792 aa12.65□□□□□ -0.38
SNHG1-206ENST00000537925 ADAM2Q99965 735 aa12.65□□□□□ -0.38
SNHG1-206ENST00000537925 PYM1Q9BRP8 204 aaKnown RBP12.65□□□□□ -0.38
SNHG1-206ENST00000537925 RUSC1Q9BVN2 902 aa12.65□□□□□ -0.38
SNHG1-206ENST00000537925 KCND2Q9NZV8 630 aa12.65□□□□□ -0.38
SNHG1-206ENST00000537925 MSRAQ9UJ68 235 aa12.65□□□□□ -0.38
SNHG1-206ENST00000537925 YBX2Q9Y2T7 364 aaKnown RBP12.65□□□□□ -0.38
SNHG1-206ENST00000537925 PCDHA5Q9Y5H7 936 aa12.65□□□□□ -0.38
SNHG1-206ENST00000537925 TRIP11Q15643 1979 aa12.65□□□□□ -0.38
SNHG1-206ENST00000537925 TMEM265A0A087WTH1 108 aa12.65□□□□□ -0.38
SNHG1-206ENST00000537925 C9IYK1 514 aa12.65□□□□□ -0.38
SNHG1-206ENST00000537925 TLL1O43897 1013 aa12.65□□□□□ -0.38
SNHG1-206ENST00000537925 MYOGP15173 224 aa12.65□□□□□ -0.38
SNHG1-206ENST00000537925 ZNF18P17022 549 aa12.65□□□□□ -0.38
SNHG1-206ENST00000537925 GUCY2CP25092 1073 aa12.65□□□□□ -0.38
SNHG1-206ENST00000537925 TXLNAP40222 546 aa12.65□□□□□ -0.38
SNHG1-206ENST00000537925 UBASH3AP57075 661 aa12.65□□□□□ -0.38
SNHG1-206ENST00000537925 FAM189BP81408 668 aa12.65□□□□□ -0.38
SNHG1-206ENST00000537925 HTRA4P83105 476 aaPredicted RBP12.65□□□□□ -0.38
SNHG1-206ENST00000537925 MAPK7Q13164 816 aa12.65□□□□□ -0.38
SNHG1-206ENST00000537925 PCBP1Q15365 356 aaKnown RBP eCLIP12.65□□□□□ -0.38
SNHG1-206ENST00000537925 ARSHQ5FYA8 562 aa12.65□□□□□ -0.38
SNHG1-206ENST00000537925 E4F1Q66K89 784 aaPredicted RBP12.65□□□□□ -0.38
SNHG1-206ENST00000537925 SLC24A5Q71RS6 500 aa12.65□□□□□ -0.38
SNHG1-206ENST00000537925 RASSF8Q8NHQ8 419 aa12.65□□□□□ -0.38
SNHG1-206ENST00000537925 RAD54LQ92698 747 aa12.65□□□□□ -0.38
SNHG1-206ENST00000537925 TIFAQ96CG3 184 aa12.65□□□□□ -0.38
SNHG1-206ENST00000537925 RAD9AQ99638 391 aa12.65□□□□□ -0.38
SNHG1-206ENST00000537925 ZBED2Q9BTP6 218 aa12.65□□□□□ -0.38
SNHG1-206ENST00000537925 TIPINQ9BVW5 301 aa12.65□□□□□ -0.38
SNHG1-206ENST00000537925 L2HGDHQ9H9P8 463 aa12.65□□□□□ -0.38
SNHG1-206ENST00000537925 POLD4Q9HCU8 107 aa12.65□□□□□ -0.38
SNHG1-206ENST00000537925 CHST12Q9NRB3 414 aa12.65□□□□□ -0.38
SNHG1-206ENST00000537925 C1orf112Q9NSG2 853 aa12.65□□□□□ -0.38
SNHG1-206ENST00000537925 CGNQ9P2M7 1197 aaKnown RBP12.65□□□□□ -0.38
SNHG1-206ENST00000537925 MAN1B1Q9UKM7 699 aa12.65□□□□□ -0.38
SNHG1-206ENST00000537925 TDRD15B5MCY1 1934 aaKnown RBP12.64□□□□□ -0.39
SNHG1-206ENST00000537925 A0A087X0B3 334 aa12.64□□□□□ -0.39
SNHG1-206ENST00000537925 DENND3A2RUS2 1198 aa12.64□□□□□ -0.39
SNHG1-206ENST00000537925 ACTN4O43707 911 aaKnown RBP12.64□□□□□ -0.39
SNHG1-206ENST00000537925 UPP2O95045 317 aa12.64□□□□□ -0.39
SNHG1-206ENST00000537925 SSBP05455 408 aaKnown RBP eCLIP12.64□□□□□ -0.39
SNHG1-206ENST00000537925 ZSCAN20P17040 1043 aaPredicted RBP12.64□□□□□ -0.39
SNHG1-206ENST00000537925 NAMPTP43490 491 aa12.64□□□□□ -0.39
SNHG1-206ENST00000537925 MBTD1Q05BQ5 628 aa12.64□□□□□ -0.39
SNHG1-206ENST00000537925 MCM6Q14566 821 aa12.64□□□□□ -0.39
SNHG1-206ENST00000537925 NAALADL2Q58DX5 795 aa12.64□□□□□ -0.39
SNHG1-206ENST00000537925 RRAGBQ5VZM2 374 aa12.64□□□□□ -0.39
SNHG1-206ENST00000537925 CDCA2Q69YH5 1023 aaPredicted RBP12.64□□□□□ -0.39
SNHG1-206ENST00000537925 FAM117BQ6P1L5 589 aa12.64□□□□□ -0.39
SNHG1-206ENST00000537925 CATSPER4Q7RTX7 472 aa12.64□□□□□ -0.39
SNHG1-206ENST00000537925 LARP4BQ92615 738 aaKnown RBP12.64□□□□□ -0.39
SNHG1-206ENST00000537925 SMARCE1Q969G3 411 aa12.64□□□□□ -0.39
SNHG1-206ENST00000537925 DRC1Q96MC2 740 aa12.64□□□□□ -0.39
SNHG1-206ENST00000537925 TRAIPQ9BWF2 469 aa12.64□□□□□ -0.39
SNHG1-206ENST00000537925 TTYH1Q9H313 450 aaPredicted RBP12.64□□□□□ -0.39
SNHG1-206ENST00000537925 RC3H2Q9HBD1 1191 aaKnown RBP12.64□□□□□ -0.39
SNHG1-206ENST00000537925 AGPAT5Q9NUQ2 364 aa12.64□□□□□ -0.39
SNHG1-206ENST00000537925 STK17AQ9UEE5 414 aa12.64□□□□□ -0.39
SNHG1-206ENST00000537925 INSL6Q9Y581 213 aa12.64□□□□□ -0.39
SNHG1-206ENST00000537925 GOLGA6L9A6NEM1 432 aa12.63□□□□□ -0.39
SNHG1-206ENST00000537925 LRRIQ4A6NIV6 560 aa12.63□□□□□ -0.39
SNHG1-206ENST00000537925 USP27XA6NNY8 438 aa12.63□□□□□ -0.39
SNHG1-206ENST00000537925 HIP1RO75146 1068 aa12.63□□□□□ -0.39
SNHG1-206ENST00000537925 SERPINC1P01008 464 aa12.63□□□□□ -0.39
SNHG1-206ENST00000537925 PPP2R5AQ15172 486 aa12.63□□□□□ -0.39
SNHG1-206ENST00000537925 AMHR2Q16671 573 aa12.63□□□□□ -0.39
SNHG1-206ENST00000537925 NPAS4Q8IUM7 802 aa12.63□□□□□ -0.39
SNHG1-206ENST00000537925 SP7Q8TDD2 431 aaPredicted RBP12.63□□□□□ -0.39
SNHG1-206ENST00000537925 PPP1R13BQ96KQ4 1090 aa12.63□□□□□ -0.39
SNHG1-206ENST00000537925 IFT74Q96LB3 600 aa12.63□□□□□ -0.39
SNHG1-206ENST00000537925 NKX2-4Q9H2Z4 354 aa12.63□□□□□ -0.39
SNHG1-206ENST00000537925 ELAC1Q9H777 363 aaKnown RBP12.63□□□□□ -0.39
SNHG1-206ENST00000537925 C17orf75Q9HAS0 396 aa12.63□□□□□ -0.39
SNHG1-206ENST00000537925 PRDM6Q9NQX0 595 aa12.63□□□□□ -0.39
SNHG1-206ENST00000537925 COL4A4P53420 1690 aaPredicted RBP12.63□□□□□ -0.39
SNHG1-206ENST00000537925 PHLPP2Q6ZVD8 1323 aa12.63□□□□□ -0.39
SNHG1-206ENST00000537925 CITO14578 2027 aa12.62□□□□□ -0.39
SNHG1-206ENST00000537925 LCHNA4D1U4 455 aa12.62□□□□□ -0.39
SNHG1-206ENST00000537925 INO80B-WBP1J3KQ70 363 aa12.62□□□□□ -0.39
SNHG1-206ENST00000537925 POLR2DO15514 142 aaKnown RBP12.62□□□□□ -0.39
SNHG1-206ENST00000537925 TSPAN1O60635 241 aa12.62□□□□□ -0.39
SNHG1-206ENST00000537925 DGKIO75912 1065 aa12.62□□□□□ -0.39
SNHG1-206ENST00000537925 CA3P07451 260 aa12.62□□□□□ -0.39
SNHG1-206ENST00000537925 STAG3L1P0CL83 205 aa12.62□□□□□ -0.39
SNHG1-206ENST00000537925 BMP6P22004 513 aa12.62□□□□□ -0.39
SNHG1-206ENST00000537925 AXLP30530 894 aa12.62□□□□□ -0.39
SNHG1-206ENST00000537925 HOXA11P31270 313 aaPredicted RBP12.62□□□□□ -0.39
SNHG1-206ENST00000537925 TBX2Q13207 712 aaPredicted RBP12.62□□□□□ -0.39
SNHG1-206ENST00000537925 ZNF697Q5TEC3 545 aa12.62□□□□□ -0.39
SNHG1-206ENST00000537925 GPBP1Q86WP2 473 aa12.62□□□□□ -0.39
SNHG1-206ENST00000537925 ZNF689Q96CS4 500 aaPredicted RBP12.62□□□□□ -0.39
SNHG1-206ENST00000537925 CCDC113Q9H0I3 377 aa12.62□□□□□ -0.39
SNHG1-206ENST00000537925 C2orf40Q9H1Z8 148 aa12.62□□□□□ -0.39
SNHG1-206ENST00000537925 SEMA6BQ9H3T3 888 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms