RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 TBC1D10BQ4KMP7 808 aaPredicted RBP15.43■□□□□ 0.06
USP44-203ENST00000537435 ZDHHC24Q6UX98 284 aa15.43■□□□□ 0.06
USP44-203ENST00000537435 YTHDF3Q7Z739 585 aaKnown RBP15.43■□□□□ 0.06
USP44-203ENST00000537435 NOP9Q86U38 636 aaKnown RBP15.43■□□□□ 0.06
USP44-203ENST00000537435 PRELID2Q8N945 189 aa15.43■□□□□ 0.06
USP44-203ENST00000537435 FBXO25Q8TCJ0 367 aa15.43■□□□□ 0.06
USP44-203ENST00000537435 TMEM174Q8WUU8 243 aa15.43■□□□□ 0.06
USP44-203ENST00000537435 PSMD1Q99460 953 aa15.43■□□□□ 0.06
USP44-203ENST00000537435 EPB41L4BQ9H329 900 aa15.43■□□□□ 0.06
USP44-203ENST00000537435 AGO4Q9HCK5 861 aaKnown RBP15.43■□□□□ 0.06
USP44-203ENST00000537435 CAPN7Q9Y6W3 813 aa15.43■□□□□ 0.06
USP44-203ENST00000537435 SLC16A4O15374 487 aa15.43■□□□□ 0.06
USP44-203ENST00000537435 RAD17O75943 681 aa15.43■□□□□ 0.06
USP44-203ENST00000537435 HSPA6P17066 643 aa15.43■□□□□ 0.06
USP44-203ENST00000537435 CHRNB2P17787 502 aa15.43■□□□□ 0.06
USP44-203ENST00000537435 PTGER2P43116 358 aa15.43■□□□□ 0.06
USP44-203ENST00000537435 PTGIRP43119 386 aa15.43■□□□□ 0.06
USP44-203ENST00000537435 PMS2P54278 862 aa15.43■□□□□ 0.06
USP44-203ENST00000537435 GTF2BQ00403 316 aa15.43■□□□□ 0.06
USP44-203ENST00000537435 TKFCQ3LXA3 575 aa15.43■□□□□ 0.06
USP44-203ENST00000537435 RNF187Q5TA31 235 aaPredicted RBP15.43■□□□□ 0.06
USP44-203ENST00000537435 FBXW10Q5XX13 1052 aa15.43■□□□□ 0.06
USP44-203ENST00000537435 ZDHHC14Q8IZN3 488 aa15.43■□□□□ 0.06
USP44-203ENST00000537435 ACP6Q9NPH0 428 aa15.43■□□□□ 0.06
USP44-203ENST00000537435 GPRC5CQ9NQ84 441 aa15.43■□□□□ 0.06
USP44-203ENST00000537435 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.43■□□□□ 0.06
USP44-203ENST00000537435 SHBGP04278 402 aa15.42■□□□□ 0.06
USP44-203ENST00000537435 ADRB2P07550 413 aa15.42■□□□□ 0.06
USP44-203ENST00000537435 YWHABP31946 246 aaKnown RBP15.42■□□□□ 0.06
USP44-203ENST00000537435 CHRNA3P32297 505 aa15.42■□□□□ 0.06
USP44-203ENST00000537435 DRG2P55039 364 aaKnown RBP15.42■□□□□ 0.06
USP44-203ENST00000537435 PEX3P56589 373 aa15.42■□□□□ 0.06
USP44-203ENST00000537435 IFT88Q13099 833 aa15.42■□□□□ 0.06
USP44-203ENST00000537435 SPP2Q13103 211 aa15.42■□□□□ 0.06
USP44-203ENST00000537435 SPDYE2Q495Y8 402 aa15.42■□□□□ 0.06
USP44-203ENST00000537435 SEL1L2Q5TEA6 688 aa15.42■□□□□ 0.06
USP44-203ENST00000537435 PPM1KQ8N3J5 372 aa15.42■□□□□ 0.06
USP44-203ENST00000537435 CLEC4DQ8WXI8 215 aa15.42■□□□□ 0.06
USP44-203ENST00000537435 RAPGEF5Q92565 580 aa15.42■□□□□ 0.06
USP44-203ENST00000537435 KREMEN1Q96MU8 473 aa15.42■□□□□ 0.06
USP44-203ENST00000537435 RPS6KC1Q96S38 1066 aa15.42■□□□□ 0.06
USP44-203ENST00000537435 NOCTQ9UK39 431 aaKnown RBP15.42■□□□□ 0.06
USP44-203ENST00000537435 UBIAD1Q9Y5Z9 338 aa15.42■□□□□ 0.06
USP44-203ENST00000537435 CYP26A1O43174 497 aa15.42■□□□□ 0.06
USP44-203ENST00000537435 C21orf2O43822 256 aa15.42■□□□□ 0.06
USP44-203ENST00000537435 CAND2O75155 1236 aa15.42■□□□□ 0.06
USP44-203ENST00000537435 PEX5P50542 639 aa15.42■□□□□ 0.06
USP44-203ENST00000537435 MRPS9P82933 396 aaKnown RBP15.42■□□□□ 0.06
USP44-203ENST00000537435 TTC27Q6P3X3 843 aa15.42■□□□□ 0.06
USP44-203ENST00000537435 NIPA1Q7RTP0 329 aa15.42■□□□□ 0.06
USP44-203ENST00000537435 HOOK3Q86VS8 718 aa15.42■□□□□ 0.06
USP44-203ENST00000537435 FAM71AQ8IYT1 594 aa15.42■□□□□ 0.06
USP44-203ENST00000537435 TLCD1Q96CP7 247 aa15.42■□□□□ 0.06
USP44-203ENST00000537435 PABPC3Q9H361 631 aaKnown RBP15.42■□□□□ 0.06
USP44-203ENST00000537435 GGA2Q9UJY4 613 aa15.42■□□□□ 0.06
USP44-203ENST00000537435 ZBTB12Q9Y330 459 aaPredicted RBP15.42■□□□□ 0.06
USP44-203ENST00000537435 BACH1O14867 736 aa15.41■□□□□ 0.06
USP44-203ENST00000537435 MAPK13O15264 365 aa15.41■□□□□ 0.06
USP44-203ENST00000537435 PAEPP09466 180 aa15.41■□□□□ 0.06
USP44-203ENST00000537435 NUDT17P0C025 328 aa15.41■□□□□ 0.06
USP44-203ENST00000537435 GZMAP12544 262 aa15.41■□□□□ 0.06
USP44-203ENST00000537435 CTNNA2P26232 953 aa15.41■□□□□ 0.06
USP44-203ENST00000537435 MAP2K1Q02750 393 aaPredicted RBP15.41■□□□□ 0.06
USP44-203ENST00000537435 MTMR1Q13613 665 aa15.41■□□□□ 0.06
USP44-203ENST00000537435 RASA3Q14644 834 aa15.41■□□□□ 0.06
USP44-203ENST00000537435 UGCGQ16739 394 aa15.41■□□□□ 0.06
USP44-203ENST00000537435 QPCTQ16769 361 aa15.41■□□□□ 0.06
USP44-203ENST00000537435 C6orf89Q6UWU4 347 aa15.41■□□□□ 0.06
USP44-203ENST00000537435 SLC47A2Q86VL8 602 aa15.41■□□□□ 0.06
USP44-203ENST00000537435 OGFOD1Q8N543 542 aa15.41■□□□□ 0.06
USP44-203ENST00000537435 BTBD6Q96KE9 485 aa15.41■□□□□ 0.06
USP44-203ENST00000537435 WNT8AQ9H1J5 351 aa15.41■□□□□ 0.06
USP44-203ENST00000537435 GRHL1Q9NZI5 618 aa15.41■□□□□ 0.06
USP44-203ENST00000537435 PCYOX1Q9UHG3 505 aa15.41■□□□□ 0.06
USP44-203ENST00000537435 TRPC6Q9Y210 931 aa15.41■□□□□ 0.06
USP44-203ENST00000537435 TBC1D12O60347 775 aa15.41■□□□□ 0.06
USP44-203ENST00000537435 MTA2O94776 668 aa15.41■□□□□ 0.06
USP44-203ENST00000537435 FSBPO95073 299 aa15.41■□□□□ 0.06
USP44-203ENST00000537435 LYPLA2O95372 231 aa15.41■□□□□ 0.06
USP44-203ENST00000537435 MMEP08473 750 aa15.41■□□□□ 0.06
USP44-203ENST00000537435 RPL21P46778 160 aaKnown RBP15.41■□□□□ 0.06
USP44-203ENST00000537435 FNTAP49354 379 aa15.41■□□□□ 0.06
USP44-203ENST00000537435 CCDC137Q6PK04 289 aaKnown RBP15.41■□□□□ 0.06
USP44-203ENST00000537435 MMS22LQ6ZRQ5 1243 aa15.41■□□□□ 0.06
USP44-203ENST00000537435 CPNE8Q86YQ8 564 aa15.41■□□□□ 0.06
USP44-203ENST00000537435 CBWD2Q8IUF1 395 aa15.41■□□□□ 0.06
USP44-203ENST00000537435 CPXCR1Q8N123 301 aa15.41■□□□□ 0.06
USP44-203ENST00000537435 C3orf20Q8ND61 904 aa15.41■□□□□ 0.06
USP44-203ENST00000537435 SEMA4DQ92854 862 aa15.41■□□□□ 0.06
USP44-203ENST00000537435 RNF25Q96BH1 459 aaPredicted RBP15.41■□□□□ 0.06
USP44-203ENST00000537435 ST6GALNAC4Q9H4F1 302 aa15.41■□□□□ 0.06
USP44-203ENST00000537435 PNMA2Q9UL42 364 aa15.41■□□□□ 0.06
USP44-203ENST00000537435 ASTN2O75129 1339 aaPredicted RBP15.41■□□□□ 0.06
USP44-203ENST00000537435 PMM2O15305 246 aa15.4■□□□□ 0.06
USP44-203ENST00000537435 PYGMP11217 842 aa15.4■□□□□ 0.06
USP44-203ENST00000537435 ALAS1P13196 640 aa15.4■□□□□ 0.06
USP44-203ENST00000537435 FMO1Q01740 532 aa15.4■□□□□ 0.06
USP44-203ENST00000537435 PCNX4Q63HM2 1172 aa15.4■□□□□ 0.06
USP44-203ENST00000537435 DENND2CQ68D51 928 aa15.4■□□□□ 0.06
USP44-203ENST00000537435 ZNF564Q8TBZ8 553 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms