RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 FOXB2Q5VYV0 432 aa16.76■□□□□ 0.27
CHFR-213ENST00000536843 H2AFVQ71UI9 128 aa16.76■□□□□ 0.27
CHFR-213ENST00000536843 MYOCDQ8IZQ8 938 aa16.76■□□□□ 0.27
CHFR-213ENST00000536843 COA7Q96BR5 231 aa16.76■□□□□ 0.27
CHFR-213ENST00000536843 COA1Q9GZY4 146 aa16.76■□□□□ 0.27
CHFR-213ENST00000536843 CARD9Q9H257 536 aa16.76■□□□□ 0.27
CHFR-213ENST00000536843 GPCPD1Q9NPB8 672 aa16.76■□□□□ 0.27
CHFR-213ENST00000536843 USP40Q9NVE5 1235 aa16.76■□□□□ 0.27
CHFR-213ENST00000536843 TRAF5O00463 557 aa16.75■□□□□ 0.27
CHFR-213ENST00000536843 LMNAP02545 664 aaKnown RBP16.75■□□□□ 0.27
CHFR-213ENST00000536843 PSMC4P43686 418 aa16.75■□□□□ 0.27
CHFR-213ENST00000536843 DCAF12L1Q5VU92 463 aa16.75■□□□□ 0.27
CHFR-213ENST00000536843 REXO1Q8N1G1 1221 aaKnown RBP16.75■□□□□ 0.27
CHFR-213ENST00000536843 FLAD1Q8NFF5 587 aa16.75■□□□□ 0.27
CHFR-213ENST00000536843 LARP4BQ92615 738 aaKnown RBP16.75■□□□□ 0.27
CHFR-213ENST00000536843 RUNDC3BQ96NL0 473 aa16.75■□□□□ 0.27
CHFR-213ENST00000536843 ZCWPW1Q9H0M4 648 aa16.75■□□□□ 0.27
CHFR-213ENST00000536843 ERVK-5Q9HDB9 667 aa16.75■□□□□ 0.27
CHFR-213ENST00000536843 USP20Q9Y2K6 914 aa16.75■□□□□ 0.27
CHFR-213ENST00000536843 SIGLEC16A6NMB1 481 aa16.75■□□□□ 0.27
CHFR-213ENST00000536843 DOK7Q18PE1 504 aa16.75■□□□□ 0.27
CHFR-213ENST00000536843 MUM1Q2TAK8 710 aa16.75■□□□□ 0.27
CHFR-213ENST00000536843 DPY19L2P1Q6NXN4 242 aa16.75■□□□□ 0.27
CHFR-213ENST00000536843 DYMQ7RTS9 669 aa16.75■□□□□ 0.27
CHFR-213ENST00000536843 RBM12BQ8IXT5 1001 aaKnown RBP16.75■□□□□ 0.27
CHFR-213ENST00000536843 PHC3Q8NDX5 983 aa16.75■□□□□ 0.27
CHFR-213ENST00000536843 GLIS3Q8NEA6 775 aa16.75■□□□□ 0.27
CHFR-213ENST00000536843 ARHGEF2Q92974 986 aaKnown RBP16.75■□□□□ 0.27
CHFR-213ENST00000536843 FAM192AQ9GZU8 254 aa16.75■□□□□ 0.27
CHFR-213ENST00000536843 DMAP1Q9NPF5 467 aaPredicted RBP16.75■□□□□ 0.27
CHFR-213ENST00000536843 NVLO15381 856 aaKnown RBP16.74■□□□□ 0.27
CHFR-213ENST00000536843 FGFR4P22455 802 aa16.74■□□□□ 0.27
CHFR-213ENST00000536843 ATP5DP30049 168 aa16.74■□□□□ 0.27
CHFR-213ENST00000536843 PTGIRP43119 386 aa16.74■□□□□ 0.27
CHFR-213ENST00000536843 SCNN1DP51172 638 aa16.74■□□□□ 0.27
CHFR-213ENST00000536843 LRRC41Q15345 812 aa16.74■□□□□ 0.27
CHFR-213ENST00000536843 INTS8Q75QN2 995 aaKnown RBP16.74■□□□□ 0.27
CHFR-213ENST00000536843 UHMK1Q8TAS1 419 aaKnown RBP16.74■□□□□ 0.27
CHFR-213ENST00000536843 UCMAQ8WVF2 138 aa16.74■□□□□ 0.27
CHFR-213ENST00000536843 SERPINB12Q96P63 405 aa16.74■□□□□ 0.27
CHFR-213ENST00000536843 TGS1Q96RS0 853 aaKnown RBP16.74■□□□□ 0.27
CHFR-213ENST00000536843 DDX23Q9BUQ8 820 aaKnown RBP16.74■□□□□ 0.27
CHFR-213ENST00000536843 TIPINQ9BVW5 301 aa16.74■□□□□ 0.27
CHFR-213ENST00000536843 MYLK2Q9H1R3 596 aa16.74■□□□□ 0.27
CHFR-213ENST00000536843 DCLRE1BQ9H816 532 aa16.74■□□□□ 0.27
CHFR-213ENST00000536843 PITPNM2Q9BZ72 1349 aa16.74■□□□□ 0.27
CHFR-213ENST00000536843 IGKV6D-41A0A0C4DH26 115 aa16.74■□□□□ 0.27
CHFR-213ENST00000536843 ESYT2A0FGR8 921 aa16.74■□□□□ 0.27
CHFR-213ENST00000536843 ECE2O60344 883 aa16.74■□□□□ 0.27
CHFR-213ENST00000536843 ZNF568Q3ZCX4 644 aa16.74■□□□□ 0.27
CHFR-213ENST00000536843 DNAAF5Q86Y56 855 aa16.74■□□□□ 0.27
CHFR-213ENST00000536843 MAGEB18Q96M61 343 aa16.74■□□□□ 0.27
CHFR-213ENST00000536843 ZC3H12CQ9C0D7 883 aaKnown RBP16.74■□□□□ 0.27
CHFR-213ENST00000536843 NMRK1Q9NWW6 199 aa16.74■□□□□ 0.27
CHFR-213ENST00000536843 KIF13BQ9NQT8 1826 aa16.74■□□□□ 0.27
CHFR-213ENST00000536843 PLIN4Q96Q06 1357 aa16.73■□□□□ 0.27
CHFR-213ENST00000536843 TXKP42681 527 aa16.73■□□□□ 0.27
CHFR-213ENST00000536843 MAGEA8P43361 318 aa16.73■□□□□ 0.27
CHFR-213ENST00000536843 RPL21P46778 160 aaKnown RBP16.73■□□□□ 0.27
CHFR-213ENST00000536843 LONP2Q86WA8 852 aa16.73■□□□□ 0.27
CHFR-213ENST00000536843 NCAPG2Q86XI2 1143 aa16.73■□□□□ 0.27
CHFR-213ENST00000536843 SUPT20HQ8NEM7 779 aa16.73■□□□□ 0.27
CHFR-213ENST00000536843 PNMA5Q96PV4 448 aa16.73■□□□□ 0.27
CHFR-213ENST00000536843 STOML1Q9UBI4 398 aa16.73■□□□□ 0.27
CHFR-213ENST00000536843 PCDHA3Q9Y5H8 950 aa16.73■□□□□ 0.27
CHFR-213ENST00000536843 POTEFA5A3E0 1075 aa16.72■□□□□ 0.27
CHFR-213ENST00000536843 PODXLO00592 558 aa16.72■□□□□ 0.27
CHFR-213ENST00000536843 EDIL3O43854 480 aa16.72■□□□□ 0.27
CHFR-213ENST00000536843 POTEIP0CG38 1075 aa16.72■□□□□ 0.27
CHFR-213ENST00000536843 POTEJP0CG39 1038 aa16.72■□□□□ 0.27
CHFR-213ENST00000536843 VHLP40337 213 aa16.72■□□□□ 0.27
CHFR-213ENST00000536843 ADCY7P51828 1080 aa16.72■□□□□ 0.27
CHFR-213ENST00000536843 POLGP54098 1239 aaPredicted RBP16.72■□□□□ 0.27
CHFR-213ENST00000536843 YARSP54577 528 aaKnown RBP16.72■□□□□ 0.27
CHFR-213ENST00000536843 RNASELQ05823 741 aaKnown RBP16.72■□□□□ 0.27
CHFR-213ENST00000536843 SETDB1Q15047 1291 aa16.72■□□□□ 0.27
CHFR-213ENST00000536843 ASPRV1Q53RT3 343 aa16.72■□□□□ 0.27
CHFR-213ENST00000536843 POTEEQ6S8J3 1075 aa16.72■□□□□ 0.27
CHFR-213ENST00000536843 VSIG1Q86XK7 387 aa16.72■□□□□ 0.27
CHFR-213ENST00000536843 AZIN2Q96A70 460 aa16.72■□□□□ 0.27
CHFR-213ENST00000536843 UBE2OQ9C0C9 1292 aaKnown RBP16.72■□□□□ 0.27
CHFR-213ENST00000536843 LRRC27Q9C0I9 530 aa16.72■□□□□ 0.27
CHFR-213ENST00000536843 ZWILCHQ9H900 591 aa16.72■□□□□ 0.27
CHFR-213ENST00000536843 NCANO14594 1321 aa16.72■□□□□ 0.27
CHFR-213ENST00000536843 PFASO15067 1338 aa16.72■□□□□ 0.27
CHFR-213ENST00000536843 TRAFD1O14545 582 aaPredicted RBP16.72■□□□□ 0.27
CHFR-213ENST00000536843 CREB3O43889 395 aa16.72■□□□□ 0.27
CHFR-213ENST00000536843 PHF2O75151 1096 aa16.72■□□□□ 0.27
CHFR-213ENST00000536843 SLURP2P0DP57 97 aa16.72■□□□□ 0.27
CHFR-213ENST00000536843 SNHG28P0DPA3 235 aa16.72■□□□□ 0.27
CHFR-213ENST00000536843 UCHL3P15374 230 aa16.72■□□□□ 0.27
CHFR-213ENST00000536843 COPB2P35606 906 aa16.72■□□□□ 0.27
CHFR-213ENST00000536843 OCRLQ01968 901 aa16.72■□□□□ 0.27
CHFR-213ENST00000536843 HHATQ5VTY9 493 aa16.72■□□□□ 0.27
CHFR-213ENST00000536843 VPS36Q86VN1 386 aa16.72■□□□□ 0.27
CHFR-213ENST00000536843 ZC3H3Q8IXZ2 948 aaKnown RBP16.72■□□□□ 0.27
CHFR-213ENST00000536843 TBC1D10AQ9BXI6 508 aa16.72■□□□□ 0.27
CHFR-213ENST00000536843 PCYOX1Q9UHG3 505 aa16.72■□□□□ 0.27
CHFR-213ENST00000536843 PHF24Q9UPV7 400 aa16.72■□□□□ 0.27
CHFR-213ENST00000536843 SUGT1Q9Y2Z0 365 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms