RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 ACTN1P12814 892 aa23.13■■□□□ 1.29
TRIM3-214ENST00000536344 EIF4A3P38919 411 aaKnown RBP23.13■■□□□ 1.29
TRIM3-214ENST00000536344 KIF11P52732 1056 aa23.13■■□□□ 1.29
TRIM3-214ENST00000536344 DRP2Q13474 957 aa23.13■■□□□ 1.29
TRIM3-214ENST00000536344 SWSAP1Q6NVH7 229 aa23.13■■□□□ 1.29
TRIM3-214ENST00000536344 ZNF526Q8TF50 670 aaPredicted RBP23.13■■□□□ 1.29
TRIM3-214ENST00000536344 NSMCE1Q8WV22 266 aa23.13■■□□□ 1.29
TRIM3-214ENST00000536344 SPDL1Q96EA4 605 aa23.13■■□□□ 1.29
TRIM3-214ENST00000536344 TMBIM4Q9HC24 238 aa23.13■■□□□ 1.29
TRIM3-214ENST00000536344 NOD2Q9HC29 1040 aa23.13■■□□□ 1.29
TRIM3-214ENST00000536344 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.13■■□□□ 1.29
TRIM3-214ENST00000536344 ZMYM2Q9UBW7 1377 aa23.13■■□□□ 1.29
TRIM3-214ENST00000536344 KLHDC7AQ5VTJ3 777 aa23.13■■□□□ 1.29
TRIM3-214ENST00000536344 LBX2Q6XYB7 198 aa23.13■■□□□ 1.29
TRIM3-214ENST00000536344 NIPA1Q7RTP0 329 aa23.13■■□□□ 1.29
TRIM3-214ENST00000536344 HMGB1P1B2RPK0 211 aaPredicted RBP23.12■■□□□ 1.29
TRIM3-214ENST00000536344 K7ENM7 598 aa23.12■■□□□ 1.29
TRIM3-214ENST00000536344 ATP6V1G2O95670 118 aa23.12■■□□□ 1.29
TRIM3-214ENST00000536344 OAZ1P54368 228 aa23.12■■□□□ 1.29
TRIM3-214ENST00000536344 ELF3P78545 371 aaPredicted RBP23.12■■□□□ 1.29
TRIM3-214ENST00000536344 KCNH2Q12809 1159 aa23.12■■□□□ 1.29
TRIM3-214ENST00000536344 GRIK3Q13003 919 aa23.12■■□□□ 1.29
TRIM3-214ENST00000536344 PAK2Q13177 524 aa23.12■■□□□ 1.29
TRIM3-214ENST00000536344 Q3C1V9 767 aa23.12■■□□□ 1.29
TRIM3-214ENST00000536344 CYFIP1Q7L576 1253 aa23.12■■□□□ 1.29
TRIM3-214ENST00000536344 ZNF720Q7Z2F6 126 aa23.12■■□□□ 1.29
TRIM3-214ENST00000536344 DDX42Q86XP3 938 aaKnown RBP eCLIP23.12■■□□□ 1.29
TRIM3-214ENST00000536344 TRIM59Q8IWR1 403 aa23.12■■□□□ 1.29
TRIM3-214ENST00000536344 CD302Q8IX05 232 aa23.12■■□□□ 1.29
TRIM3-214ENST00000536344 ANKRD13AQ8IZ07 590 aa23.12■■□□□ 1.29
TRIM3-214ENST00000536344 HVCN1Q96D96 273 aa23.12■■□□□ 1.29
TRIM3-214ENST00000536344 LSM14BQ9BX40 385 aaKnown RBP23.12■■□□□ 1.29
TRIM3-214ENST00000536344 PCIF1Q9H4Z3 704 aa23.12■■□□□ 1.29
TRIM3-214ENST00000536344 MAP3K20Q9NYL2 800 aaKnown RBP23.12■■□□□ 1.29
TRIM3-214ENST00000536344 GGA2Q9UJY4 613 aa23.12■■□□□ 1.29
TRIM3-214ENST00000536344 LRRC53A6NM62 1247 aa23.12■■□□□ 1.29
TRIM3-214ENST00000536344 MGRN1O60291 552 aa23.12■■□□□ 1.29
TRIM3-214ENST00000536344 PRLRP16471 622 aa23.12■■□□□ 1.29
TRIM3-214ENST00000536344 GLE1Q53GS7 698 aaKnown RBP23.12■■□□□ 1.29
TRIM3-214ENST00000536344 FAM102BQ5T8I3 360 aa23.12■■□□□ 1.29
TRIM3-214ENST00000536344 RUBCNQ92622 972 aa23.12■■□□□ 1.29
TRIM3-214ENST00000536344 INPP4AQ96PE3 977 aaPredicted RBP23.12■■□□□ 1.29
TRIM3-214ENST00000536344 WDR64B1ANS9 1081 aa23.11■■□□□ 1.29
TRIM3-214ENST00000536344 ZNF862O60290 1169 aa23.11■■□□□ 1.29
TRIM3-214ENST00000536344 KCNA2P16389 499 aa23.11■■□□□ 1.29
TRIM3-214ENST00000536344 XRCC4Q13426 336 aa23.11■■□□□ 1.29
TRIM3-214ENST00000536344 ANO5Q75V66 913 aa23.11■■□□□ 1.29
TRIM3-214ENST00000536344 RAPGEF5Q92565 580 aa23.11■■□□□ 1.29
TRIM3-214ENST00000536344 SARNPP82979 210 aaKnown RBP23.11■■□□□ 1.29
TRIM3-214ENST00000536344 PPP1R7Q15435 360 aa23.11■■□□□ 1.29
TRIM3-214ENST00000536344 ERO1BQ86YB8 467 aa23.11■■□□□ 1.29
TRIM3-214ENST00000536344 SYCP3Q8IZU3 236 aa23.11■■□□□ 1.29
TRIM3-214ENST00000536344 ZSWIM2Q8NEG5 633 aa23.11■■□□□ 1.29
TRIM3-214ENST00000536344 TSGA10Q9BZW7 698 aa23.11■■□□□ 1.29
TRIM3-214ENST00000536344 SPATC1LQ9H0A9 340 aa23.11■■□□□ 1.29
TRIM3-214ENST00000536344 OLFML3Q9NRN5 406 aa23.11■■□□□ 1.29
TRIM3-214ENST00000536344 ARMCX3Q9UH62 379 aaPredicted RBP23.11■■□□□ 1.29
TRIM3-214ENST00000536344 FTCDO95954 541 aa23.1■■□□□ 1.29
TRIM3-214ENST00000536344 PEX3P56589 373 aa23.1■■□□□ 1.29
TRIM3-214ENST00000536344 GFPT1Q06210 699 aaPredicted RBP23.1■■□□□ 1.29
TRIM3-214ENST00000536344 UAP1Q16222 522 aaPredicted RBP23.1■■□□□ 1.29
TRIM3-214ENST00000536344 CACNA2D4Q7Z3S7 1137 aa23.1■■□□□ 1.29
TRIM3-214ENST00000536344 KLHL7Q8IXQ5 586 aa23.1■■□□□ 1.29
TRIM3-214ENST00000536344 TCP11Q8WWU5 503 aa23.1■■□□□ 1.29
TRIM3-214ENST00000536344 CEP63Q96MT8 703 aa23.1■■□□□ 1.29
TRIM3-214ENST00000536344 NUP58Q9BVL2 599 aa23.1■■□□□ 1.29
TRIM3-214ENST00000536344 TAF1DQ9H5J8 278 aaPredicted RBP23.1■■□□□ 1.29
TRIM3-214ENST00000536344 TYW1Q9NV66 732 aaKnown RBP23.1■■□□□ 1.29
TRIM3-214ENST00000536344 TRAF3IP3Q9Y228 551 aa23.1■■□□□ 1.29
TRIM3-214ENST00000536344 CYP2C8P10632 490 aa23.1■■□□□ 1.29
TRIM3-214ENST00000536344 GAP43P17677 238 aa23.1■■□□□ 1.29
TRIM3-214ENST00000536344 SLC9A1P19634 815 aa23.1■■□□□ 1.29
TRIM3-214ENST00000536344 POLR2FP61218 127 aaKnown RBP23.1■■□□□ 1.29
TRIM3-214ENST00000536344 ODF2Q5BJF6 829 aa23.1■■□□□ 1.29
TRIM3-214ENST00000536344 CCDC60Q8IWA6 550 aaPredicted RBP23.1■■□□□ 1.29
TRIM3-214ENST00000536344 MOV10L1Q9BXT6 1211 aaKnown RBP23.1■■□□□ 1.29
TRIM3-214ENST00000536344 EIF4E1BA6NMX2 242 aaKnown RBP23.1■■□□□ 1.29
TRIM3-214ENST00000536344 ENO4A6NNW6 628 aa23.1■■□□□ 1.29
TRIM3-214ENST00000536344 PDXKO00764 312 aa23.1■■□□□ 1.29
TRIM3-214ENST00000536344 SLC16A4O15374 487 aa23.1■■□□□ 1.29
TRIM3-214ENST00000536344 RAD51CO43502 376 aa23.1■■□□□ 1.29
TRIM3-214ENST00000536344 CALUO43852 315 aaPredicted RBP23.1■■□□□ 1.29
TRIM3-214ENST00000536344 AKR1B10O60218 316 aa23.1■■□□□ 1.29
TRIM3-214ENST00000536344 GJA5P36382 358 aa23.1■■□□□ 1.29
TRIM3-214ENST00000536344 HSD17B3P37058 310 aa23.1■■□□□ 1.29
TRIM3-214ENST00000536344 HLTFQ14527 1009 aaKnown RBP eCLIP23.1■■□□□ 1.29
TRIM3-214ENST00000536344 CACNA2D3Q8IZS8 1091 aa23.1■■□□□ 1.29
TRIM3-214ENST00000536344 MAGEC3Q8TD91 643 aa23.1■■□□□ 1.29
TRIM3-214ENST00000536344 CCT6BQ92526 530 aa23.1■■□□□ 1.29
TRIM3-214ENST00000536344 A0A0G2JLL6 359 aaPredicted RBP23.09■■□□□ 1.29
TRIM3-214ENST00000536344 ATP2A1O14983 1001 aa23.09■■□□□ 1.29
TRIM3-214ENST00000536344 BUB1BO60566 1050 aaPredicted RBP23.09■■□□□ 1.29
TRIM3-214ENST00000536344 UPP2O95045 317 aa23.09■■□□□ 1.29
TRIM3-214ENST00000536344 PSMC5P62195 406 aa23.09■■□□□ 1.29
TRIM3-214ENST00000536344 EDRF1Q3B7T1 1238 aa23.09■■□□□ 1.29
TRIM3-214ENST00000536344 USP50Q70EL3 339 aaPredicted RBP23.09■■□□□ 1.29
TRIM3-214ENST00000536344 PRRT2Q7Z6L0 340 aaPredicted RBP23.09■■□□□ 1.29
TRIM3-214ENST00000536344 MDM1Q8TC05 714 aa23.09■■□□□ 1.29
TRIM3-214ENST00000536344 LMBR1Q8WVP7 490 aa23.09■■□□□ 1.29
TRIM3-214ENST00000536344 ALS2CR12Q96Q35 445 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms