RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 DAAM2Q86T65 1068 aa14.47□□□□□ -0.09
VPS33B-202ENST00000535906 USP38Q8NB14 1042 aa14.47□□□□□ -0.09
VPS33B-202ENST00000535906 PARD3BQ8TEW8 1205 aa14.47□□□□□ -0.09
VPS33B-202ENST00000535906 SEMA4DQ92854 862 aa14.47□□□□□ -0.09
VPS33B-202ENST00000535906 SEPT11Q9NVA2 429 aaKnown RBP14.47□□□□□ -0.09
VPS33B-202ENST00000535906 STXBP5LQ9Y2K9 1186 aa14.47□□□□□ -0.09
VPS33B-202ENST00000535906 PTPRFP10586 1907 aa14.47□□□□□ -0.09
VPS33B-202ENST00000535906 CES2O00748 559 aa14.46□□□□□ -0.09
VPS33B-202ENST00000535906 PMM2O15305 246 aa14.46□□□□□ -0.09
VPS33B-202ENST00000535906 DDNO94850 711 aaPredicted RBP14.46□□□□□ -0.09
VPS33B-202ENST00000535906 GLI1P08151 1106 aa14.46□□□□□ -0.09
VPS33B-202ENST00000535906 TMEM253P0C7T8 217 aa14.46□□□□□ -0.09
VPS33B-202ENST00000535906 ATP4AP20648 1035 aa14.46□□□□□ -0.09
VPS33B-202ENST00000535906 STXBP2Q15833 593 aa14.46□□□□□ -0.09
VPS33B-202ENST00000535906 TAS1R3Q7RTX0 852 aa14.46□□□□□ -0.09
VPS33B-202ENST00000535906 PEX26Q7Z412 305 aa14.46□□□□□ -0.09
VPS33B-202ENST00000535906 ANKRD35Q8N283 1001 aa14.46□□□□□ -0.09
VPS33B-202ENST00000535906 MCPH1Q8NEM0 835 aa14.46□□□□□ -0.09
VPS33B-202ENST00000535906 FBXO41Q8TF61 875 aa14.46□□□□□ -0.09
VPS33B-202ENST00000535906 LMBR1Q8WVP7 490 aa14.46□□□□□ -0.09
VPS33B-202ENST00000535906 AGPAT1Q99943 283 aa14.46□□□□□ -0.09
VPS33B-202ENST00000535906 THAP2Q9H0W7 228 aa14.46□□□□□ -0.09
VPS33B-202ENST00000535906 PLEKHA4Q9H4M7 779 aa14.46□□□□□ -0.09
VPS33B-202ENST00000535906 BTBD7Q9P203 1132 aa14.46□□□□□ -0.09
VPS33B-202ENST00000535906 DICER1Q9UPY3 1922 aaKnown RBP14.46□□□□□ -0.09
VPS33B-202ENST00000535906 LOC285556D6RIA3 1793 aa14.46□□□□□ -0.09
VPS33B-202ENST00000535906 SUPT20HL2P0C7V6 817 aa14.46□□□□□ -0.09
VPS33B-202ENST00000535906 NNTQ13423 1086 aa14.46□□□□□ -0.09
VPS33B-202ENST00000535906 MTERF2Q49AM1 385 aa14.46□□□□□ -0.09
VPS33B-202ENST00000535906 MIS18BP1Q6P0N0 1132 aa14.46□□□□□ -0.09
VPS33B-202ENST00000535906 LBX2Q6XYB7 198 aa14.46□□□□□ -0.09
VPS33B-202ENST00000535906 NT5DC3Q86UY8 548 aa14.46□□□□□ -0.09
VPS33B-202ENST00000535906 IFT20Q8IY31 132 aa14.46□□□□□ -0.09
VPS33B-202ENST00000535906 METTL13Q8N6R0 699 aa14.46□□□□□ -0.09
VPS33B-202ENST00000535906 CHST13Q8NET6 341 aa14.46□□□□□ -0.09
VPS33B-202ENST00000535906 RFFLQ8WZ73 363 aa14.46□□□□□ -0.09
VPS33B-202ENST00000535906 POMGNT1Q8WZA1 660 aa14.46□□□□□ -0.09
VPS33B-202ENST00000535906 ARHGEF26Q96DR7 871 aa14.46□□□□□ -0.09
VPS33B-202ENST00000535906 FBXL18Q96ME1 805 aa14.46□□□□□ -0.09
VPS33B-202ENST00000535906 KRT12Q99456 494 aa14.46□□□□□ -0.09
VPS33B-202ENST00000535906 GDF3Q9NR23 364 aa14.46□□□□□ -0.09
VPS33B-202ENST00000535906 TMEM59LQ9UK28 342 aa14.46□□□□□ -0.09
VPS33B-202ENST00000535906 NCANO14594 1321 aa14.45□□□□□ -0.1
VPS33B-202ENST00000535906 BUB1BO60566 1050 aaPredicted RBP14.45□□□□□ -0.1
VPS33B-202ENST00000535906 SEPT14Q6ZU15 432 aa14.45□□□□□ -0.1
VPS33B-202ENST00000535906 DNERQ8NFT8 737 aa14.45□□□□□ -0.1
VPS33B-202ENST00000535906 CTNNBL1Q8WYA6 563 aaPredicted RBP14.45□□□□□ -0.1
VPS33B-202ENST00000535906 PBKQ96KB5 322 aa14.45□□□□□ -0.1
VPS33B-202ENST00000535906 KREMEN1Q96MU8 473 aa14.45□□□□□ -0.1
VPS33B-202ENST00000535906 SH3GL2Q99962 352 aa14.45□□□□□ -0.1
VPS33B-202ENST00000535906 ATP6V0A4Q9HBG4 840 aa14.45□□□□□ -0.1
VPS33B-202ENST00000535906 TOPORSQ9NS56 1045 aaPredicted RBP14.45□□□□□ -0.1
VPS33B-202ENST00000535906 USP20Q9Y2K6 914 aa14.45□□□□□ -0.1
VPS33B-202ENST00000535906 ZSCAN5CA6NGD5 496 aaPredicted RBP14.45□□□□□ -0.1
VPS33B-202ENST00000535906 TULP2O00295 520 aa14.45□□□□□ -0.1
VPS33B-202ENST00000535906 HNRNPDLO14979 420 aaKnown RBP14.45□□□□□ -0.1
VPS33B-202ENST00000535906 CEP104O60308 925 aa14.45□□□□□ -0.1
VPS33B-202ENST00000535906 USP8P40818 1118 aa14.45□□□□□ -0.1
VPS33B-202ENST00000535906 RTP1P59025 263 aa14.45□□□□□ -0.1
VPS33B-202ENST00000535906 PPATQ06203 517 aa14.45□□□□□ -0.1
VPS33B-202ENST00000535906 XKR3Q5GH77 459 aa14.45□□□□□ -0.1
VPS33B-202ENST00000535906 KRT39Q6A163 491 aa14.45□□□□□ -0.1
VPS33B-202ENST00000535906 SYCE1Q8N0S2 351 aa14.45□□□□□ -0.1
VPS33B-202ENST00000535906 PPM1KQ8N3J5 372 aa14.45□□□□□ -0.1
VPS33B-202ENST00000535906 MFSD14AQ96MC6 490 aa14.45□□□□□ -0.1
VPS33B-202ENST00000535906 POLR3FQ9H1D9 316 aaPredicted RBP14.45□□□□□ -0.1
VPS33B-202ENST00000535906 ACP6Q9NPH0 428 aa14.45□□□□□ -0.1
VPS33B-202ENST00000535906 ARHGAP28Q9P2N2 729 aa14.45□□□□□ -0.1
VPS33B-202ENST00000535906 SUCLA2Q9P2R7 463 aaPredicted RBP14.45□□□□□ -0.1
VPS33B-202ENST00000535906 SYNGAP1Q96PV0 1343 aa14.44□□□□□ -0.1
VPS33B-202ENST00000535906 ANKRD62A6NC57 917 aa14.44□□□□□ -0.1
VPS33B-202ENST00000535906 ADM5C9JUS6 153 aa14.44□□□□□ -0.1
VPS33B-202ENST00000535906 ATG7O95352 703 aa14.44□□□□□ -0.1
VPS33B-202ENST00000535906 SGPL1O95470 568 aa14.44□□□□□ -0.1
VPS33B-202ENST00000535906 ICAM3P32942 547 aa14.44□□□□□ -0.1
VPS33B-202ENST00000535906 ALS2CLQ60I27 953 aa14.44□□□□□ -0.1
VPS33B-202ENST00000535906 ACTRT1Q8TDG2 376 aa14.44□□□□□ -0.1
VPS33B-202ENST00000535906 ELMO3Q96BJ8 720 aa14.44□□□□□ -0.1
VPS33B-202ENST00000535906 HES6Q96HZ4 224 aa14.44□□□□□ -0.1
VPS33B-202ENST00000535906 MAF1Q9H063 256 aa14.44□□□□□ -0.1
VPS33B-202ENST00000535906 TMEM8AQ9HCN3 771 aa14.44□□□□□ -0.1
VPS33B-202ENST00000535906 COQ4Q9Y3A0 265 aa14.44□□□□□ -0.1
VPS33B-202ENST00000535906 MAFBQ9Y5Q3 323 aaPredicted RBP14.44□□□□□ -0.1
VPS33B-202ENST00000535906 SBF1O95248 1867 aa14.44□□□□□ -0.1
VPS33B-202ENST00000535906 GOLGA6CA6NDK9 693 aa14.44□□□□□ -0.1
VPS33B-202ENST00000535906 HEXIM1O94992 359 aaKnown RBP14.44□□□□□ -0.1
VPS33B-202ENST00000535906 GOLGA6DP0CG33 693 aa14.44□□□□□ -0.1
VPS33B-202ENST00000535906 ALDH5A1P51649 535 aaPredicted RBP14.44□□□□□ -0.1
VPS33B-202ENST00000535906 CYP24A1Q07973 514 aa14.44□□□□□ -0.1
VPS33B-202ENST00000535906 BRDTQ58F21 947 aaPredicted RBP14.44□□□□□ -0.1
VPS33B-202ENST00000535906 FAM71AQ8IYT1 594 aa14.44□□□□□ -0.1
VPS33B-202ENST00000535906 RPUSD2Q8IZ73 545 aaKnown RBP14.44□□□□□ -0.1
VPS33B-202ENST00000535906 FAM76AQ8TAV0 307 aa14.44□□□□□ -0.1
VPS33B-202ENST00000535906 TAS1R2Q8TE23 839 aa14.44□□□□□ -0.1
VPS33B-202ENST00000535906 VTI1AQ96AJ9 217 aa14.44□□□□□ -0.1
VPS33B-202ENST00000535906 IFT74Q96LB3 600 aa14.44□□□□□ -0.1
VPS33B-202ENST00000535906 GOLGA6AQ9NYA3 693 aa14.44□□□□□ -0.1
VPS33B-202ENST00000535906 COG5Q9UP83 839 aa14.44□□□□□ -0.1
VPS33B-202ENST00000535906 ESYT3A0FGR9 886 aa14.43□□□□□ -0.1
VPS33B-202ENST00000535906 GOLGA8KD6RF30 607 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms