RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 NCLP19338 710 aaKnown RBP12□□□□□ -0.49
CCDC60-202ENST00000535685 MCM7P33993 719 aa12□□□□□ -0.49
CCDC60-202ENST00000535685 ALDH7A1P49419 539 aaKnown RBP12□□□□□ -0.49
CCDC60-202ENST00000535685 NDUFV1P49821 464 aa12□□□□□ -0.49
CCDC60-202ENST00000535685 BCAR1P56945 870 aa12□□□□□ -0.49
CCDC60-202ENST00000535685 GUCY1B3Q02153 619 aa12□□□□□ -0.49
CCDC60-202ENST00000535685 NOMO2Q5JPE7 1267 aa12□□□□□ -0.49
CCDC60-202ENST00000535685 AGMOQ6ZNB7 445 aa12□□□□□ -0.49
CCDC60-202ENST00000535685 EP400NLQ6ZTU2 488 aa12□□□□□ -0.49
CCDC60-202ENST00000535685 METTL3Q86U44 580 aaKnown RBP12□□□□□ -0.49
CCDC60-202ENST00000535685 CATSPER3Q86XQ3 398 aa12□□□□□ -0.49
CCDC60-202ENST00000535685 C4orf32Q8N8J7 132 aa12□□□□□ -0.49
CCDC60-202ENST00000535685 FAM184AQ8NB25 1140 aa12□□□□□ -0.49
CCDC60-202ENST00000535685 RNF169Q8NCN4 708 aa12□□□□□ -0.49
CCDC60-202ENST00000535685 MICAL1Q8TDZ2 1067 aa12□□□□□ -0.49
CCDC60-202ENST00000535685 NACC1Q96RE7 527 aa12□□□□□ -0.49
CCDC60-202ENST00000535685 POP1Q99575 1024 aaKnown RBP12□□□□□ -0.49
CCDC60-202ENST00000535685 UBN1Q9NPG3 1134 aa12□□□□□ -0.49
CCDC60-202ENST00000535685 TBC1D13Q9NVG8 400 aa12□□□□□ -0.49
CCDC60-202ENST00000535685 KANSL3Q9P2N6 904 aa12□□□□□ -0.49
CCDC60-202ENST00000535685 PCDHGC5Q9Y5F6 944 aa12□□□□□ -0.49
CCDC60-202ENST00000535685 TECTAO75443 2155 aa12□□□□□ -0.49
CCDC60-202ENST00000535685 ZNF318Q5VUA4 2279 aa12□□□□□ -0.49
CCDC60-202ENST00000535685 ZMYM2Q9UBW7 1377 aa12□□□□□ -0.49
CCDC60-202ENST00000535685 MTCL1Q9Y4B5 1905 aaKnown RBP11.99□□□□□ -0.49
CCDC60-202ENST00000535685 MYH11P35749 1972 aa11.99□□□□□ -0.49
CCDC60-202ENST00000535685 GALTP07902 379 aa11.99□□□□□ -0.49
CCDC60-202ENST00000535685 ALADP13716 330 aa11.99□□□□□ -0.49
CCDC60-202ENST00000535685 GLRA2P23416 452 aa11.99□□□□□ -0.49
CCDC60-202ENST00000535685 NCBP1Q09161 790 aaKnown RBP11.99□□□□□ -0.49
CCDC60-202ENST00000535685 CAPSQ13938 189 aa11.99□□□□□ -0.49
CCDC60-202ENST00000535685 PDIA5Q14554 519 aa11.99□□□□□ -0.49
CCDC60-202ENST00000535685 TTC38Q5R3I4 469 aa11.99□□□□□ -0.49
CCDC60-202ENST00000535685 NOTUMQ6P988 496 aa11.99□□□□□ -0.49
CCDC60-202ENST00000535685 DDX53Q86TM3 631 aaKnown RBP11.99□□□□□ -0.49
CCDC60-202ENST00000535685 MRPL43Q8N983 215 aaKnown RBP11.99□□□□□ -0.49
CCDC60-202ENST00000535685 MCPH1Q8NEM0 835 aa11.99□□□□□ -0.49
CCDC60-202ENST00000535685 ERMNQ8TAM6 284 aa11.99□□□□□ -0.49
CCDC60-202ENST00000535685 ASAP3Q8TDY4 903 aa11.99□□□□□ -0.49
CCDC60-202ENST00000535685 SUSD6Q92537 303 aa11.99□□□□□ -0.49
CCDC60-202ENST00000535685 TCF25Q9BQ70 676 aa11.99□□□□□ -0.49
CCDC60-202ENST00000535685 TMEM175Q9BSA9 504 aa11.99□□□□□ -0.49
CCDC60-202ENST00000535685 NRDE2Q9H7Z3 1164 aa11.99□□□□□ -0.49
CCDC60-202ENST00000535685 NOL7Q9UMY1 257 aaKnown RBP11.99□□□□□ -0.49
CCDC60-202ENST00000535685 MUC6Q6W4X9 2439 aa11.98□□□□□ -0.49
CCDC60-202ENST00000535685 ZDBF2Q9HCK1 2354 aa11.98□□□□□ -0.49
CCDC60-202ENST00000535685 C2orf71A6NGG8 1288 aa11.98□□□□□ -0.49
CCDC60-202ENST00000535685 MEIS3P2A8K0S8 358 aa11.98□□□□□ -0.49
CCDC60-202ENST00000535685 LAD1O00515 517 aa11.98□□□□□ -0.49
CCDC60-202ENST00000535685 ST18O60284 1047 aa11.98□□□□□ -0.49
CCDC60-202ENST00000535685 TSPAN1O60635 241 aa11.98□□□□□ -0.49
CCDC60-202ENST00000535685 MED24O75448 989 aa11.98□□□□□ -0.49
CCDC60-202ENST00000535685 ERLIN2O94905 339 aa11.98□□□□□ -0.49
CCDC60-202ENST00000535685 SRGAP2BP0DMP2 458 aa11.98□□□□□ -0.49
CCDC60-202ENST00000535685 HOXB8P17481 243 aaPredicted RBP11.98□□□□□ -0.49
CCDC60-202ENST00000535685 TECP42680 631 aa11.98□□□□□ -0.49
CCDC60-202ENST00000535685 MBTD1Q05BQ5 628 aa11.98□□□□□ -0.49
CCDC60-202ENST00000535685 GIT2Q14161 759 aa11.98□□□□□ -0.49
CCDC60-202ENST00000535685 SMC1AQ14683 1233 aaKnown RBP11.98□□□□□ -0.49
CCDC60-202ENST00000535685 BMS1Q14692 1282 aaKnown RBP11.98□□□□□ -0.49
CCDC60-202ENST00000535685 CBX2Q14781 532 aaPredicted RBP11.98□□□□□ -0.49
CCDC60-202ENST00000535685 ZNF174Q15697 407 aa11.98□□□□□ -0.49
CCDC60-202ENST00000535685 FAM187BQ17R55 369 aa11.98□□□□□ -0.49
CCDC60-202ENST00000535685 HAUS3Q68CZ6 603 aa11.98□□□□□ -0.49
CCDC60-202ENST00000535685 TMC7Q7Z402 723 aa11.98□□□□□ -0.49
CCDC60-202ENST00000535685 RBM23Q86U06 439 aaKnown RBP11.98□□□□□ -0.49
CCDC60-202ENST00000535685 SMG8Q8ND04 991 aaKnown RBP11.98□□□□□ -0.49
CCDC60-202ENST00000535685 VN1R2Q8NFZ6 395 aa11.98□□□□□ -0.49
CCDC60-202ENST00000535685 PIGOQ8TEQ8 1089 aa11.98□□□□□ -0.49
CCDC60-202ENST00000535685 LPPQ93052 612 aa11.98□□□□□ -0.49
CCDC60-202ENST00000535685 TMEM169Q96HH4 297 aa11.98□□□□□ -0.49
CCDC60-202ENST00000535685 IGSF21Q96ID5 467 aa11.98□□□□□ -0.49
CCDC60-202ENST00000535685 PRIMPOLQ96LW4 560 aa11.98□□□□□ -0.49
CCDC60-202ENST00000535685 CSRNP2Q9H175 543 aa11.98□□□□□ -0.49
CCDC60-202ENST00000535685 RSAD1Q9HA92 442 aa11.98□□□□□ -0.49
CCDC60-202ENST00000535685 ENTPD7Q9NQZ7 604 aa11.98□□□□□ -0.49
CCDC60-202ENST00000535685 KIF3AQ9Y496 699 aa11.98□□□□□ -0.49
CCDC60-202ENST00000535685 ADGRG1Q9Y653 693 aa11.98□□□□□ -0.49
CCDC60-202ENST00000535685 HIDE1A8MVS5 230 aa11.97□□□□□ -0.49
CCDC60-202ENST00000535685 PER2O15055 1255 aa11.97□□□□□ -0.49
CCDC60-202ENST00000535685 CTSAP10619 480 aa11.97□□□□□ -0.49
CCDC60-202ENST00000535685 CYP11B2P19099 503 aa11.97□□□□□ -0.49
CCDC60-202ENST00000535685 ATP2B1P20020 1258 aa11.97□□□□□ -0.49
CCDC60-202ENST00000535685 COL9A1P20849 921 aa11.97□□□□□ -0.49
CCDC60-202ENST00000535685 SSTR3P32745 418 aaPredicted RBP11.97□□□□□ -0.49
CCDC60-202ENST00000535685 PBX3P40426 434 aa11.97□□□□□ -0.49
CCDC60-202ENST00000535685 PRPHP41219 470 aa11.97□□□□□ -0.49
CCDC60-202ENST00000535685 MCM2P49736 904 aa11.97□□□□□ -0.49
CCDC60-202ENST00000535685 TOB1P50616 345 aaPredicted RBP11.97□□□□□ -0.49
CCDC60-202ENST00000535685 TMEM31Q5JXX7 168 aa11.97□□□□□ -0.49
CCDC60-202ENST00000535685 PLPP4Q5VZY2 271 aa11.97□□□□□ -0.49
CCDC60-202ENST00000535685 CDCA2Q69YH5 1023 aaPredicted RBP11.97□□□□□ -0.49
CCDC60-202ENST00000535685 IGSF22Q8N9C0 903 aa11.97□□□□□ -0.49
CCDC60-202ENST00000535685 URGCPQ8TCY9 931 aa11.97□□□□□ -0.49
CCDC60-202ENST00000535685 CCDC43Q96MW1 224 aaKnown RBP11.97□□□□□ -0.49
CCDC60-202ENST00000535685 LRFN3Q9BTN0 628 aa11.97□□□□□ -0.49
CCDC60-202ENST00000535685 ZBP1Q9H171 429 aa11.97□□□□□ -0.49
CCDC60-202ENST00000535685 POLR3FQ9H1D9 316 aaPredicted RBP11.97□□□□□ -0.49
CCDC60-202ENST00000535685 S1PR5Q9H228 398 aa11.97□□□□□ -0.49
CCDC60-202ENST00000535685 FZD8Q9H461 694 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms