RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 USP15Q9Y4E8 981 aaPredicted RBP14.41□□□□□ -0.1
HDAC4-214ENST00000535493 EMSYQ7Z589 1322 aa14.4□□□□□ -0.1
HDAC4-214ENST00000535493 A0A1B0GUA9 196 aa14.4□□□□□ -0.1
HDAC4-214ENST00000535493 DDX39AO00148 427 aaKnown RBP14.4□□□□□ -0.1
HDAC4-214ENST00000535493 SLITRK3O94933 977 aa14.4□□□□□ -0.1
HDAC4-214ENST00000535493 MYBL1P10243 752 aa14.4□□□□□ -0.1
HDAC4-214ENST00000535493 CHRNB2P17787 502 aa14.4□□□□□ -0.1
HDAC4-214ENST00000535493 COILP38432 576 aaPredicted RBP14.4□□□□□ -0.1
HDAC4-214ENST00000535493 NT5C2P49902 561 aa14.4□□□□□ -0.1
HDAC4-214ENST00000535493 PEX5P50542 639 aa14.4□□□□□ -0.1
HDAC4-214ENST00000535493 HP1BP3Q5SSJ5 553 aaPredicted RBP14.4□□□□□ -0.1
HDAC4-214ENST00000535493 LLGL2Q6P1M3 1020 aa14.4□□□□□ -0.1
HDAC4-214ENST00000535493 VSTM1Q6UX27 236 aa14.4□□□□□ -0.1
HDAC4-214ENST00000535493 KIAA0825Q8IV33 1275 aa14.4□□□□□ -0.1
HDAC4-214ENST00000535493 UBL4BQ8N7F7 174 aa14.4□□□□□ -0.1
HDAC4-214ENST00000535493 TBC1D16Q8TBP0 767 aa14.4□□□□□ -0.1
HDAC4-214ENST00000535493 AAASQ9NRG9 546 aa14.4□□□□□ -0.1
HDAC4-214ENST00000535493 CCNL1Q9UK58 526 aaPredicted RBP14.4□□□□□ -0.1
HDAC4-214ENST00000535493 C15orf41Q9Y2V0 281 aa14.4□□□□□ -0.1
HDAC4-214ENST00000535493 CYP3A7-CYP3A51PA0A087WV96 503 aa14.4□□□□□ -0.1
HDAC4-214ENST00000535493 TP73O15350 636 aa14.4□□□□□ -0.1
HDAC4-214ENST00000535493 KIF1CO43896 1103 aaKnown RBP14.4□□□□□ -0.1
HDAC4-214ENST00000535493 CETPP11597 493 aa14.4□□□□□ -0.1
HDAC4-214ENST00000535493 IL1R1P14778 569 aa14.4□□□□□ -0.1
HDAC4-214ENST00000535493 CYP3A7P24462 503 aa14.4□□□□□ -0.1
HDAC4-214ENST00000535493 CHRNA3P32297 505 aa14.4□□□□□ -0.1
HDAC4-214ENST00000535493 PDE6CP51160 858 aa14.4□□□□□ -0.1
HDAC4-214ENST00000535493 PPP3CAQ08209 521 aa14.4□□□□□ -0.1
HDAC4-214ENST00000535493 SLC47A2Q86VL8 602 aa14.4□□□□□ -0.1
HDAC4-214ENST00000535493 COL23A1Q86Y22 540 aaPredicted RBP14.4□□□□□ -0.1
HDAC4-214ENST00000535493 MAGEC3Q8TD91 643 aa14.4□□□□□ -0.1
HDAC4-214ENST00000535493 P3H4Q92791 437 aa14.4□□□□□ -0.1
HDAC4-214ENST00000535493 MRRFQ96E11 262 aaKnown RBP14.4□□□□□ -0.1
HDAC4-214ENST00000535493 PARVGQ9HBI0 331 aa14.4□□□□□ -0.1
HDAC4-214ENST00000535493 KCNQ5Q9NR82 932 aa14.4□□□□□ -0.1
HDAC4-214ENST00000535493 ASIC3Q9UHC3 531 aa14.4□□□□□ -0.1
HDAC4-214ENST00000535493 GAKO14976 1311 aa14.39□□□□□ -0.11
HDAC4-214ENST00000535493 CCDC189A1A4V9 331 aa14.39□□□□□ -0.11
HDAC4-214ENST00000535493 CYP26A1O43174 497 aa14.39□□□□□ -0.11
HDAC4-214ENST00000535493 CHRM1P11229 460 aaPredicted RBP14.39□□□□□ -0.11
HDAC4-214ENST00000535493 MGAT5Q09328 741 aa14.39□□□□□ -0.11
HDAC4-214ENST00000535493 RBM26Q5T8P6 1007 aaKnown RBP14.39□□□□□ -0.11
HDAC4-214ENST00000535493 SEL1L2Q5TEA6 688 aa14.39□□□□□ -0.11
HDAC4-214ENST00000535493 HS2ST1Q7LGA3 356 aa14.39□□□□□ -0.11
HDAC4-214ENST00000535493 SRRM1Q8IYB3 904 aaKnown RBP14.39□□□□□ -0.11
HDAC4-214ENST00000535493 SPOCK2Q92563 424 aa14.39□□□□□ -0.11
HDAC4-214ENST00000535493 SPDL1Q96EA4 605 aa14.39□□□□□ -0.11
HDAC4-214ENST00000535493 EBF2Q9HAK2 575 aa14.39□□□□□ -0.11
HDAC4-214ENST00000535493 CDK5RAP2Q96SN8 1893 aa14.39□□□□□ -0.11
HDAC4-214ENST00000535493 GOLGA8IPA6NC78 632 aa14.39□□□□□ -0.11
HDAC4-214ENST00000535493 GOLGA8JA6NMD2 632 aa14.39□□□□□ -0.11
HDAC4-214ENST00000535493 EYA4O95677 639 aa14.39□□□□□ -0.11
HDAC4-214ENST00000535493 CFBP00751 764 aa14.39□□□□□ -0.11
HDAC4-214ENST00000535493 RARGP13631 454 aa14.39□□□□□ -0.11
HDAC4-214ENST00000535493 BMT2Q1RMZ1 405 aa14.39□□□□□ -0.11
HDAC4-214ENST00000535493 PRR5LQ6MZQ0 368 aa14.39□□□□□ -0.11
HDAC4-214ENST00000535493 C1orf186Q6ZWK4 172 aa14.39□□□□□ -0.11
HDAC4-214ENST00000535493 ZNF720Q7Z2F6 126 aa14.39□□□□□ -0.11
HDAC4-214ENST00000535493 CRYGNQ8WXF5 182 aa14.39□□□□□ -0.11
HDAC4-214ENST00000535493 FIZ1Q96SL8 496 aa14.39□□□□□ -0.11
HDAC4-214ENST00000535493 HERPUD2Q9BSE4 406 aa14.39□□□□□ -0.11
HDAC4-214ENST00000535493 CHST7Q9NS84 486 aa14.39□□□□□ -0.11
HDAC4-214ENST00000535493 SYNGAP1Q96PV0 1343 aa14.39□□□□□ -0.11
HDAC4-214ENST00000535493 MAST2Q6P0Q8 1798 aa14.38□□□□□ -0.11
HDAC4-214ENST00000535493 GTPBP10A4D1E9 387 aaKnown RBP14.38□□□□□ -0.11
HDAC4-214ENST00000535493 RTN2O75298 545 aa14.38□□□□□ -0.11
HDAC4-214ENST00000535493 BRAFP15056 766 aa14.38□□□□□ -0.11
HDAC4-214ENST00000535493 CTNNA2P26232 953 aa14.38□□□□□ -0.11
HDAC4-214ENST00000535493 CCNHP51946 323 aaPredicted RBP14.38□□□□□ -0.11
HDAC4-214ENST00000535493 CALCOCO2Q13137 446 aa14.38□□□□□ -0.11
HDAC4-214ENST00000535493 ZNF268Q14587 947 aaPredicted RBP14.38□□□□□ -0.11
HDAC4-214ENST00000535493 CDC42EP5Q6NZY7 148 aa14.38□□□□□ -0.11
HDAC4-214ENST00000535493 CAPN12Q6ZSI9 719 aa14.38□□□□□ -0.11
HDAC4-214ENST00000535493 BZW1Q7L1Q6 419 aaKnown RBP14.38□□□□□ -0.11
HDAC4-214ENST00000535493 NOP9Q86U38 636 aaKnown RBP14.38□□□□□ -0.11
HDAC4-214ENST00000535493 SLC13A5Q86YT5 568 aaPredicted RBP14.38□□□□□ -0.11
HDAC4-214ENST00000535493 MICAL1Q8TDZ2 1067 aa14.38□□□□□ -0.11
HDAC4-214ENST00000535493 FAM163AQ96GL9 167 aaPredicted RBP14.38□□□□□ -0.11
HDAC4-214ENST00000535493 L3MBTL3Q96JM7 780 aaPredicted RBP14.38□□□□□ -0.11
HDAC4-214ENST00000535493 TMEM237Q96Q45 408 aa14.38□□□□□ -0.11
HDAC4-214ENST00000535493 CBWD1Q9BRT8 395 aa14.38□□□□□ -0.11
HDAC4-214ENST00000535493 WDR18Q9BV38 432 aa14.38□□□□□ -0.11
HDAC4-214ENST00000535493 NUP85Q9BW27 656 aa14.38□□□□□ -0.11
HDAC4-214ENST00000535493 HEMGNQ9BXL5 484 aa14.38□□□□□ -0.11
HDAC4-214ENST00000535493 TRIM6Q9C030 488 aaPredicted RBP14.38□□□□□ -0.11
HDAC4-214ENST00000535493 PCYOX1Q9UHG3 505 aa14.38□□□□□ -0.11
HDAC4-214ENST00000535493 FRMPD4Q14CM0 1322 aa14.38□□□□□ -0.11
HDAC4-214ENST00000535493 COPS2P61201 443 aa14.38□□□□□ -0.11
HDAC4-214ENST00000535493 GPC5P78333 572 aa14.38□□□□□ -0.11
HDAC4-214ENST00000535493 KRT17Q04695 432 aa14.38□□□□□ -0.11
HDAC4-214ENST00000535493 BFSP1Q12934 665 aa14.38□□□□□ -0.11
HDAC4-214ENST00000535493 CRYMQ14894 314 aa14.38□□□□□ -0.11
HDAC4-214ENST00000535493 CGB2Q6NT52 195 aa14.38□□□□□ -0.11
HDAC4-214ENST00000535493 RNF207Q6ZRF8 634 aa14.38□□□□□ -0.11
HDAC4-214ENST00000535493 TAOK1Q7L7X3 1001 aa14.38□□□□□ -0.11
HDAC4-214ENST00000535493 PPM1KQ8N3J5 372 aa14.38□□□□□ -0.11
HDAC4-214ENST00000535493 LMO3Q8TAP4 145 aa14.38□□□□□ -0.11
HDAC4-214ENST00000535493 ART4Q93070 314 aa14.38□□□□□ -0.11
HDAC4-214ENST00000535493 C9orf72Q96LT7 481 aa14.38□□□□□ -0.11
HDAC4-214ENST00000535493 DDTLA6NHG4 134 aaPredicted RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms