RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 POLR2FP61218 127 aaKnown RBP20.59■□□□□ 0.89
SMPD1-210ENST00000534405 SLC27A3Q5K4L6 730 aa20.59■□□□□ 0.89
SMPD1-210ENST00000534405 RBBP8NLQ8NC74 664 aaPredicted RBP20.59■□□□□ 0.89
SMPD1-210ENST00000534405 TXLNGYQ9BZA5 131 aa20.59■□□□□ 0.89
SMPD1-210ENST00000534405 PICK1Q9NRD5 415 aa20.59■□□□□ 0.89
SMPD1-210ENST00000534405 CD2APQ9Y5K6 639 aa20.59■□□□□ 0.89
SMPD1-210ENST00000534405 SLC12A3P55017 1021 aa20.58■□□□□ 0.89
SMPD1-210ENST00000534405 RNASE9P60153 205 aaKnown RBP20.58■□□□□ 0.89
SMPD1-210ENST00000534405 PSMC6P62333 389 aa20.58■□□□□ 0.89
SMPD1-210ENST00000534405 SPIRE1Q08AE8 756 aa20.58■□□□□ 0.89
SMPD1-210ENST00000534405 SH3BP5LQ7L8J4 393 aa20.58■□□□□ 0.89
SMPD1-210ENST00000534405 FITM2Q8N6M3 262 aa20.58■□□□□ 0.89
SMPD1-210ENST00000534405 SEC14L1Q92503 715 aa20.58■□□□□ 0.89
SMPD1-210ENST00000534405 CCDC17Q96LX7 622 aa20.58■□□□□ 0.89
SMPD1-210ENST00000534405 CEP63Q96MT8 703 aa20.58■□□□□ 0.89
SMPD1-210ENST00000534405 MBOAT7Q96N66 472 aa20.58■□□□□ 0.89
SMPD1-210ENST00000534405 DBNDD1Q9H9R9 158 aa20.58■□□□□ 0.89
SMPD1-210ENST00000534405 EMILIN3Q9NT22 766 aa20.58■□□□□ 0.89
SMPD1-210ENST00000534405 NRXN2Q9P2S2 1712 aa20.58■□□□□ 0.89
SMPD1-210ENST00000534405 CYP3A7-CYP3A51PA0A087WV96 503 aa20.58■□□□□ 0.88
SMPD1-210ENST00000534405 RBAK-RBAKDNI3L0D1 243 aa20.58■□□□□ 0.88
SMPD1-210ENST00000534405 NUDT17P0C025 328 aa20.58■□□□□ 0.88
SMPD1-210ENST00000534405 CYP3A7P24462 503 aa20.58■□□□□ 0.88
SMPD1-210ENST00000534405 RXRBP28702 533 aa20.58■□□□□ 0.88
SMPD1-210ENST00000534405 DNA2P51530 1060 aa20.58■□□□□ 0.88
SMPD1-210ENST00000534405 USP11P51784 963 aa20.58■□□□□ 0.88
SMPD1-210ENST00000534405 SLFN13Q68D06 897 aa20.58■□□□□ 0.88
SMPD1-210ENST00000534405 SH3TC2Q8TF17 1288 aa20.58■□□□□ 0.88
SMPD1-210ENST00000534405 UCMAQ8WVF2 138 aa20.58■□□□□ 0.88
SMPD1-210ENST00000534405 CRYGNQ8WXF5 182 aa20.58■□□□□ 0.88
SMPD1-210ENST00000534405 LRCH1Q9Y2L9 728 aa20.58■□□□□ 0.88
SMPD1-210ENST00000534405 DESP17661 470 aa20.57■□□□□ 0.88
SMPD1-210ENST00000534405 PTDSS1P48651 473 aaKnown RBP20.57■□□□□ 0.88
SMPD1-210ENST00000534405 MARSP56192 900 aaKnown RBP20.57■□□□□ 0.88
SMPD1-210ENST00000534405 ARHGAP18Q8N392 663 aa20.57■□□□□ 0.88
SMPD1-210ENST00000534405 ETNPPLQ8TBG4 499 aa20.57■□□□□ 0.88
SMPD1-210ENST00000534405 MAF1Q9H063 256 aa20.57■□□□□ 0.88
SMPD1-210ENST00000534405 ZHX3Q9H4I2 956 aa20.57■□□□□ 0.88
SMPD1-210ENST00000534405 ARL2BPQ9Y2Y0 163 aa20.57■□□□□ 0.88
SMPD1-210ENST00000534405 UNC5CO95185 931 aa20.57■□□□□ 0.88
SMPD1-210ENST00000534405 DEUP1Q05D60 604 aa20.57■□□□□ 0.88
SMPD1-210ENST00000534405 MEX3CQ5U5Q3 659 aaKnown RBP20.57■□□□□ 0.88
SMPD1-210ENST00000534405 SFMBT2Q5VUG0 894 aa20.57■□□□□ 0.88
SMPD1-210ENST00000534405 CATSPER3Q86XQ3 398 aa20.57■□□□□ 0.88
SMPD1-210ENST00000534405 IQCGQ9H095 443 aaKnown RBP20.57■□□□□ 0.88
SMPD1-210ENST00000534405 DHX36Q9H2U1 1008 aaKnown RBP20.57■□□□□ 0.88
SMPD1-210ENST00000534405 FAM198AQ9UFP1 575 aa20.57■□□□□ 0.88
SMPD1-210ENST00000534405 MEIS1O00470 390 aa20.56■□□□□ 0.88
SMPD1-210ENST00000534405 DAPK3O43293 454 aa20.56■□□□□ 0.88
SMPD1-210ENST00000534405 NAB2Q15742 525 aa20.56■□□□□ 0.88
SMPD1-210ENST00000534405 CERKLQ49MI3 558 aaPredicted RBP20.56■□□□□ 0.88
SMPD1-210ENST00000534405 PRR16Q569H4 304 aa20.56■□□□□ 0.88
SMPD1-210ENST00000534405 SLC17A8Q8NDX2 589 aa20.56■□□□□ 0.88
SMPD1-210ENST00000534405 CFAP61Q8NHU2 1237 aa20.56■□□□□ 0.88
SMPD1-210ENST00000534405 ZNF333Q96JL9 665 aa20.56■□□□□ 0.88
SMPD1-210ENST00000534405 SERPING1P05155 500 aa20.56■□□□□ 0.88
SMPD1-210ENST00000534405 ARHGAP4P98171 946 aa20.56■□□□□ 0.88
SMPD1-210ENST00000534405 SLC9C1Q4G0N8 1177 aa20.56■□□□□ 0.88
SMPD1-210ENST00000534405 ZC3H3Q8IXZ2 948 aaKnown RBP20.56■□□□□ 0.88
SMPD1-210ENST00000534405 ACTRT1Q8TDG2 376 aa20.56■□□□□ 0.88
SMPD1-210ENST00000534405 LZICQ8WZA0 190 aa20.56■□□□□ 0.88
SMPD1-210ENST00000534405 LENG9Q96B70 501 aa20.56■□□□□ 0.88
SMPD1-210ENST00000534405 ZDHHC15Q96MV8 337 aa20.56■□□□□ 0.88
SMPD1-210ENST00000534405 NAP1L4Q99733 375 aaKnown RBP20.56■□□□□ 0.88
SMPD1-210ENST00000534405 BCAS3Q9H6U6 928 aa20.56■□□□□ 0.88
SMPD1-210ENST00000534405 NYAP2Q9P242 653 aa20.56■□□□□ 0.88
SMPD1-210ENST00000534405 PRKAG3Q9UGI9 489 aa20.56■□□□□ 0.88
SMPD1-210ENST00000534405 MROH7Q68CQ1 1323 aa20.56■□□□□ 0.88
SMPD1-210ENST00000534405 ARID5AQ03989 594 aa20.55■□□□□ 0.88
SMPD1-210ENST00000534405 PABPC4Q13310 644 aaKnown RBP eCLIP20.55■□□□□ 0.88
SMPD1-210ENST00000534405 DNAJC14Q6Y2X3 702 aaPredicted RBP20.55■□□□□ 0.88
SMPD1-210ENST00000534405 ATP8B4Q8TF62 1192 aa20.55■□□□□ 0.88
SMPD1-210ENST00000534405 DCAF4Q8WV16 495 aa20.55■□□□□ 0.88
SMPD1-210ENST00000534405 DYDC1Q8WWB3 177 aa20.55■□□□□ 0.88
SMPD1-210ENST00000534405 SYN2Q92777 582 aaPredicted RBP20.55■□□□□ 0.88
SMPD1-210ENST00000534405 IWS1Q96ST2 819 aa20.55■□□□□ 0.88
SMPD1-210ENST00000534405 YIPF2Q9BWQ6 316 aa20.55■□□□□ 0.88
SMPD1-210ENST00000534405 FAM114A2Q9NRY5 505 aa20.55■□□□□ 0.88
SMPD1-210ENST00000534405 SIGLEC16A6NMB1 481 aa20.55■□□□□ 0.88
SMPD1-210ENST00000534405 CCDC169A6NNP5 214 aa20.55■□□□□ 0.88
SMPD1-210ENST00000534405 G3V3G9 751 aa20.55■□□□□ 0.88
SMPD1-210ENST00000534405 MAFGO15525 162 aa20.55■□□□□ 0.88
SMPD1-210ENST00000534405 AGTP01019 485 aa20.55■□□□□ 0.88
SMPD1-210ENST00000534405 KRT18P05783 430 aaKnown RBP20.55■□□□□ 0.88
SMPD1-210ENST00000534405 SPATA31C1P0DKV0 1188 aa20.55■□□□□ 0.88
SMPD1-210ENST00000534405 NPR1P16066 1061 aa20.55■□□□□ 0.88
SMPD1-210ENST00000534405 CCDC15Q0P6D6 951 aa20.55■□□□□ 0.88
SMPD1-210ENST00000534405 DCAF8Q5TAQ9 597 aa20.55■□□□□ 0.88
SMPD1-210ENST00000534405 ARHGAP27Q6ZUM4 889 aa20.55■□□□□ 0.88
SMPD1-210ENST00000534405 NUDCD1Q96RS6 583 aa20.55■□□□□ 0.88
SMPD1-210ENST00000534405 GANQ9H2C0 597 aa20.55■□□□□ 0.88
SMPD1-210ENST00000534405 RMI1Q9H9A7 625 aa20.55■□□□□ 0.88
SMPD1-210ENST00000534405 ETNK1Q9HBU6 452 aa20.55■□□□□ 0.88
SMPD1-210ENST00000534405 FAM86B1E9PN63 330 aa20.54■□□□□ 0.88
SMPD1-210ENST00000534405 GNA14O95837 355 aa20.54■□□□□ 0.88
SMPD1-210ENST00000534405 FAM86B2P0C5J1 330 aa20.54■□□□□ 0.88
SMPD1-210ENST00000534405 GM2AP17900 193 aa20.54■□□□□ 0.88
SMPD1-210ENST00000534405 HOXD13P35453 343 aa20.54■□□□□ 0.88
SMPD1-210ENST00000534405 RAPGEF1Q13905 1077 aa20.54■□□□□ 0.88
SMPD1-210ENST00000534405 GIT2Q14161 759 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms