RNA–Protein interactions for RNA: ENST00000534093.5

ROM1-205, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ROM1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-205ENST00000534093 HES2Q9Y543 173 aa13.97□□□□□ -0.17
ROM1-205ENST00000534093 PCDHB12Q9Y5F1 795 aa13.97□□□□□ -0.17
ROM1-205ENST00000534093 PHLPP2Q6ZVD8 1323 aa13.96□□□□□ -0.17
ROM1-205ENST00000534093 A0A087X0B3 334 aa13.96□□□□□ -0.17
ROM1-205ENST00000534093 N4BP3O15049 544 aa13.96□□□□□ -0.17
ROM1-205ENST00000534093 SLC16A4O15374 487 aa13.96□□□□□ -0.17
ROM1-205ENST00000534093 ITGB1P05556 798 aa13.96□□□□□ -0.17
ROM1-205ENST00000534093 KRT18P05783 430 aaKnown RBP13.96□□□□□ -0.17
ROM1-205ENST00000534093 GIT2Q14161 759 aa13.96□□□□□ -0.17
ROM1-205ENST00000534093 NT5DC1Q5TFE4 455 aa13.96□□□□□ -0.17
ROM1-205ENST00000534093 CCDC73Q6ZRK6 1079 aa13.96□□□□□ -0.17
ROM1-205ENST00000534093 TAS1R3Q7RTX0 852 aa13.96□□□□□ -0.17
ROM1-205ENST00000534093 KCNG4Q8TDN1 519 aa13.96□□□□□ -0.17
ROM1-205ENST00000534093 SPIRE2Q8WWL2 714 aa13.96□□□□□ -0.17
ROM1-205ENST00000534093 NTPCRQ9BSD7 190 aaKnown RBP13.96□□□□□ -0.17
ROM1-205ENST00000534093 LMAN2LQ9H0V9 348 aa13.96□□□□□ -0.17
ROM1-205ENST00000534093 RNF39Q9H2S5 420 aa13.96□□□□□ -0.17
ROM1-205ENST00000534093 NXF3Q9H4D5 531 aaKnown RBP13.96□□□□□ -0.17
ROM1-205ENST00000534093 PDZD7Q9H5P4 517 aa13.96□□□□□ -0.17
ROM1-205ENST00000534093 UBN1Q9NPG3 1134 aa13.96□□□□□ -0.17
ROM1-205ENST00000534093 KCNG1Q9UIX4 513 aa13.96□□□□□ -0.17
ROM1-205ENST00000534093 PRUNE2Q8WUY3 3088 aa13.96□□□□□ -0.18
ROM1-205ENST00000534093 TCHHQ07283 1943 aa13.96□□□□□ -0.18
ROM1-205ENST00000534093 ATG2AQ2TAZ0 1938 aa13.96□□□□□ -0.18
ROM1-205ENST00000534093 PLXNA4Q9HCM2 1894 aa13.95□□□□□ -0.18
ROM1-205ENST00000534093 FAM13AO94988 1023 aa13.95□□□□□ -0.18
ROM1-205ENST00000534093 STAT6P42226 847 aa13.95□□□□□ -0.18
ROM1-205ENST00000534093 AFF1P51825 1210 aaKnown RBP13.95□□□□□ -0.18
ROM1-205ENST00000534093 SMTNP53814 917 aa13.95□□□□□ -0.18
ROM1-205ENST00000534093 CSPP1Q1MSJ5 1256 aa13.95□□□□□ -0.18
ROM1-205ENST00000534093 AXDND1Q5T1B0 1012 aaPredicted RBP13.95□□□□□ -0.18
ROM1-205ENST00000534093 EEF1DP3Q658K8 133 aa13.95□□□□□ -0.18
ROM1-205ENST00000534093 SHC4Q6S5L8 630 aa13.95□□□□□ -0.18
ROM1-205ENST00000534093 KCNT2Q6UVM3 1135 aa13.95□□□□□ -0.18
ROM1-205ENST00000534093 SV2BQ7L1I2 683 aa13.95□□□□□ -0.18
ROM1-205ENST00000534093 HACE1Q8IYU2 909 aa13.95□□□□□ -0.18
ROM1-205ENST00000534093 TMEM161BQ8NDZ6 487 aa13.95□□□□□ -0.18
ROM1-205ENST00000534093 SPPL3Q8TCT6 385 aa13.95□□□□□ -0.18
ROM1-205ENST00000534093 URGCPQ8TCY9 931 aa13.95□□□□□ -0.18
ROM1-205ENST00000534093 ZNF558Q96NG5 402 aa13.95□□□□□ -0.18
ROM1-205ENST00000534093 APOL6Q9BWW8 343 aa13.95□□□□□ -0.18
ROM1-205ENST00000534093 TBC1D13Q9NVG8 400 aa13.95□□□□□ -0.18
ROM1-205ENST00000534093 LARSQ9P2J5 1176 aaKnown RBP13.95□□□□□ -0.18
ROM1-205ENST00000534093 RCOR1Q9UKL0 485 aa13.95□□□□□ -0.18
ROM1-205ENST00000534093 PCDHA7Q9UN72 937 aa13.95□□□□□ -0.18
ROM1-205ENST00000534093 FGF18O76093 207 aa13.94□□□□□ -0.18
ROM1-205ENST00000534093 AKAP5P24588 427 aa13.94□□□□□ -0.18
ROM1-205ENST00000534093 DNAJB1P25685 340 aa13.94□□□□□ -0.18
ROM1-205ENST00000534093 PBX3P40426 434 aa13.94□□□□□ -0.18
ROM1-205ENST00000534093 ME1P48163 572 aa13.94□□□□□ -0.18
ROM1-205ENST00000534093 ZNF131P52739 623 aa13.94□□□□□ -0.18
ROM1-205ENST00000534093 RNASELQ05823 741 aaKnown RBP13.94□□□□□ -0.18
ROM1-205ENST00000534093 CAMK1Q14012 370 aa13.94□□□□□ -0.18
ROM1-205ENST00000534093 ATF7IP2Q5U623 682 aa13.94□□□□□ -0.18
ROM1-205ENST00000534093 THNSL1Q8IYQ7 743 aa13.94□□□□□ -0.18
ROM1-205ENST00000534093 MYCT1Q8N699 235 aa13.94□□□□□ -0.18
ROM1-205ENST00000534093 PDILTQ8N807 584 aa13.94□□□□□ -0.18
ROM1-205ENST00000534093 POF1BQ8WVV4 589 aa13.94□□□□□ -0.18
ROM1-205ENST00000534093 CHAMP1Q96JM3 812 aa13.94□□□□□ -0.18
ROM1-205ENST00000534093 GAD1Q99259 594 aa13.94□□□□□ -0.18
ROM1-205ENST00000534093 ACO2Q99798 780 aaKnown RBP13.94□□□□□ -0.18
ROM1-205ENST00000534093 ADPGKQ9BRR6 497 aa13.94□□□□□ -0.18
ROM1-205ENST00000534093 ZHX3Q9H4I2 956 aa13.94□□□□□ -0.18
ROM1-205ENST00000534093 NRDE2Q9H7Z3 1164 aa13.94□□□□□ -0.18
ROM1-205ENST00000534093 PARVGQ9HBI0 331 aa13.94□□□□□ -0.18
ROM1-205ENST00000534093 PRDM6Q9NQX0 595 aa13.94□□□□□ -0.18
ROM1-205ENST00000534093 KANSL3Q9P2N6 904 aa13.94□□□□□ -0.18
ROM1-205ENST00000534093 TNFSF13BQ9Y275 285 aa13.94□□□□□ -0.18
ROM1-205ENST00000534093 GIT1Q9Y2X7 761 aa13.94□□□□□ -0.18
ROM1-205ENST00000534093 REV3LO60673 3130 aa13.93□□□□□ -0.18
ROM1-205ENST00000534093 ARL5CA6NH57 179 aa13.93□□□□□ -0.18
ROM1-205ENST00000534093 MYMKA6NI61 221 aa13.93□□□□□ -0.18
ROM1-205ENST00000534093 DLL1O00548 723 aa13.93□□□□□ -0.18
ROM1-205ENST00000534093 INPPL1O15357 1258 aa13.93□□□□□ -0.18
ROM1-205ENST00000534093 ZC3H11AO75152 810 aaKnown RBP eCLIP13.93□□□□□ -0.18
ROM1-205ENST00000534093 TBCAO75347 108 aaKnown RBP13.93□□□□□ -0.18
ROM1-205ENST00000534093 CSPG5O95196 566 aa13.93□□□□□ -0.18
ROM1-205ENST00000534093 POMCP01189 267 aa13.93□□□□□ -0.18
ROM1-205ENST00000534093 MAPTP10636 758 aaKnown RBP13.93□□□□□ -0.18
ROM1-205ENST00000534093 MLH1P40692 756 aa13.93□□□□□ -0.18
ROM1-205ENST00000534093 NCKAP1LP55160 1127 aa13.93□□□□□ -0.18
ROM1-205ENST00000534093 BCAR1P56945 870 aa13.93□□□□□ -0.18
ROM1-205ENST00000534093 UBE3AQ05086 875 aa13.93□□□□□ -0.18
ROM1-205ENST00000534093 STRN3Q13033 797 aa13.93□□□□□ -0.18
ROM1-205ENST00000534093 SKIV2LQ15477 1246 aaKnown RBP13.93□□□□□ -0.18
ROM1-205ENST00000534093 DCAF4L1Q3SXM0 396 aa13.93□□□□□ -0.18
ROM1-205ENST00000534093 TIGD5Q53EQ6 642 aa13.93□□□□□ -0.18
ROM1-205ENST00000534093 DYMQ7RTS9 669 aa13.93□□□□□ -0.18
ROM1-205ENST00000534093 ZNF280BQ86YH2 543 aa13.93□□□□□ -0.18
ROM1-205ENST00000534093 SLC17A8Q8NDX2 589 aa13.93□□□□□ -0.18
ROM1-205ENST00000534093 DDX12PQ92771 950 aa13.93□□□□□ -0.18
ROM1-205ENST00000534093 ZFP42Q96MM3 310 aa13.93□□□□□ -0.18
ROM1-205ENST00000534093 TARS2Q9BW92 718 aaKnown RBP13.93□□□□□ -0.18
ROM1-205ENST00000534093 MRPL4Q9BYD3 311 aaKnown RBP13.93□□□□□ -0.18
ROM1-205ENST00000534093 GBP3Q9H0R5 595 aa13.93□□□□□ -0.18
ROM1-205ENST00000534093 MIOSQ9NXC5 875 aa13.93□□□□□ -0.18
ROM1-205ENST00000534093 SPG21Q9NZD8 308 aa13.93□□□□□ -0.18
ROM1-205ENST00000534093 PARP2Q9UGN5 583 aa13.93□□□□□ -0.18
ROM1-205ENST00000534093 TDRD15B5MCY1 1934 aaKnown RBP13.93□□□□□ -0.18
ROM1-205ENST00000534093 NT5C1B-RDH14C9J2C7 533 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms