RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 MAPK6Q16659 721 aa33.46■■■□□ 2.95
SSSCA1-207ENST00000533115 TMC7Q7Z402 723 aa33.46■■■□□ 2.95
SSSCA1-207ENST00000533115 HACE1Q8IYU2 909 aa33.46■■■□□ 2.95
SSSCA1-207ENST00000533115 KCTD17Q8N5Z5 321 aa33.46■■■□□ 2.95
SSSCA1-207ENST00000533115 PNMA5Q96PV4 448 aa33.46■■■□□ 2.95
SSSCA1-207ENST00000533115 CDCA3Q99618 268 aaPredicted RBP33.46■■■□□ 2.95
SSSCA1-207ENST00000533115 CCDC113Q9H0I3 377 aa33.46■■■□□ 2.95
SSSCA1-207ENST00000533115 NT5C3AQ9H0P0 336 aa33.46■■■□□ 2.95
SSSCA1-207ENST00000533115 NXF3Q9H4D5 531 aaKnown RBP33.46■■■□□ 2.95
SSSCA1-207ENST00000533115 B4GALT3O60512 393 aa33.45■■■□□ 2.95
SSSCA1-207ENST00000533115 DDHD2O94830 711 aa33.45■■■□□ 2.95
SSSCA1-207ENST00000533115 SYT1P21579 422 aa33.45■■■□□ 2.95
SSSCA1-207ENST00000533115 SLC11A1P49279 550 aa33.45■■■□□ 2.95
SSSCA1-207ENST00000533115 DUSP6Q16828 381 aa33.45■■■□□ 2.95
SSSCA1-207ENST00000533115 RINT1Q6NUQ1 792 aa33.45■■■□□ 2.95
SSSCA1-207ENST00000533115 TMEM173Q86WV6 379 aaPredicted RBP33.45■■■□□ 2.95
SSSCA1-207ENST00000533115 IGSF21Q96ID5 467 aa33.45■■■□□ 2.95
SSSCA1-207ENST00000533115 AK8Q96MA6 479 aa33.45■■■□□ 2.95
SSSCA1-207ENST00000533115 FAM193BQ96PV7 902 aaPredicted RBP33.45■■■□□ 2.95
SSSCA1-207ENST00000533115 APOL6Q9BWW8 343 aa33.45■■■□□ 2.95
SSSCA1-207ENST00000533115 FAM50BQ9Y247 325 aa33.45■■■□□ 2.95
SSSCA1-207ENST00000533115 FSD2A1L4K1 749 aa33.44■■■□□ 2.94
SSSCA1-207ENST00000533115 ARL5CA6NH57 179 aa33.44■■■□□ 2.94
SSSCA1-207ENST00000533115 INPPL1O15357 1258 aa33.44■■■□□ 2.94
SSSCA1-207ENST00000533115 PRKCBP05771 671 aa33.44■■■□□ 2.94
SSSCA1-207ENST00000533115 PRPF4BQ13523 1007 aaKnown RBP33.44■■■□□ 2.94
SSSCA1-207ENST00000533115 CLUL1Q15846 466 aa33.44■■■□□ 2.94
SSSCA1-207ENST00000533115 GAD1Q99259 594 aa33.44■■■□□ 2.94
SSSCA1-207ENST00000533115 KIFC3Q9BVG8 833 aa33.44■■■□□ 2.94
SSSCA1-207ENST00000533115 RUSC1Q9BVN2 902 aa33.44■■■□□ 2.94
SSSCA1-207ENST00000533115 GIT1Q9Y2X7 761 aa33.44■■■□□ 2.94
SSSCA1-207ENST00000533115 TTLL13PA6NNM8 815 aa33.43■■■□□ 2.94
SSSCA1-207ENST00000533115 HIDE1A8MVS5 230 aa33.43■■■□□ 2.94
SSSCA1-207ENST00000533115 ACKR2O00590 384 aa33.43■■■□□ 2.94
SSSCA1-207ENST00000533115 MLH1P40692 756 aa33.43■■■□□ 2.94
SSSCA1-207ENST00000533115 EFNA5P52803 228 aa33.43■■■□□ 2.94
SSSCA1-207ENST00000533115 SF3A1Q15459 793 aaKnown RBP33.43■■■□□ 2.94
SSSCA1-207ENST00000533115 C1orf186Q6ZWK4 172 aa33.43■■■□□ 2.94
SSSCA1-207ENST00000533115 CDK5RAP3Q96JB5 506 aa33.43■■■□□ 2.94
SSSCA1-207ENST00000533115 TMEM175Q9BSA9 504 aa33.43■■■□□ 2.94
SSSCA1-207ENST00000533115 CLEC1BQ9P126 229 aa33.43■■■□□ 2.94
SSSCA1-207ENST00000533115 N4BP3O15049 544 aa33.42■■■□□ 2.94
SSSCA1-207ENST00000533115 HIP1RO75146 1068 aa33.42■■■□□ 2.94
SSSCA1-207ENST00000533115 GLP2RO95838 553 aa33.42■■■□□ 2.94
SSSCA1-207ENST00000533115 LIG1P18858 919 aa33.42■■■□□ 2.94
SSSCA1-207ENST00000533115 SMC1AQ14683 1233 aaKnown RBP33.42■■■□□ 2.94
SSSCA1-207ENST00000533115 TMEM132AQ24JP5 1023 aa33.42■■■□□ 2.94
SSSCA1-207ENST00000533115 DDX53Q86TM3 631 aaKnown RBP33.42■■■□□ 2.94
SSSCA1-207ENST00000533115 CABP7Q86V35 215 aa33.42■■■□□ 2.94
SSSCA1-207ENST00000533115 FAM178BQ8IXR5 827 aa33.42■■■□□ 2.94
SSSCA1-207ENST00000533115 DAW1Q8N136 415 aa33.42■■■□□ 2.94
SSSCA1-207ENST00000533115 BCL7CQ8WUZ0 217 aaPredicted RBP33.42■■■□□ 2.94
SSSCA1-207ENST00000533115 MSLNLQ96KJ4 702 aa33.42■■■□□ 2.94
SSSCA1-207ENST00000533115 PLIN2Q99541 437 aa33.42■■■□□ 2.94
SSSCA1-207ENST00000533115 PDZD7Q9H5P4 517 aa33.42■■■□□ 2.94
SSSCA1-207ENST00000533115 FOXD4L1Q9NU39 408 aa33.42■■■□□ 2.94
SSSCA1-207ENST00000533115 CD207Q9UJ71 328 aa33.42■■■□□ 2.94
SSSCA1-207ENST00000533115 ALDH2P05091 517 aa33.41■■■□□ 2.94
SSSCA1-207ENST00000533115 AKAP5P24588 427 aa33.41■■■□□ 2.94
SSSCA1-207ENST00000533115 BMS1Q14692 1282 aaKnown RBP33.41■■■□□ 2.94
SSSCA1-207ENST00000533115 VPS52Q8N1B4 723 aa33.41■■■□□ 2.94
SSSCA1-207ENST00000533115 MRPL43Q8N983 215 aaKnown RBP33.41■■■□□ 2.94
SSSCA1-207ENST00000533115 DRC1Q96MC2 740 aa33.41■■■□□ 2.94
SSSCA1-207ENST00000533115 ZFP42Q96MM3 310 aa33.41■■■□□ 2.94
SSSCA1-207ENST00000533115 SLC26A4O43511 780 aa33.4■■■□□ 2.94
SSSCA1-207ENST00000533115 EDN1P05305 212 aa33.4■■■□□ 2.94
SSSCA1-207ENST00000533115 SCNN1GP51170 649 aa33.4■■■□□ 2.94
SSSCA1-207ENST00000533115 PEX3P56589 373 aa33.4■■■□□ 2.94
SSSCA1-207ENST00000533115 RESTQ13127 1097 aa33.4■■■□□ 2.94
SSSCA1-207ENST00000533115 TMEM119Q4V9L6 283 aa33.4■■■□□ 2.94
SSSCA1-207ENST00000533115 SYT2Q8N9I0 419 aaPredicted RBP33.4■■■□□ 2.94
SSSCA1-207ENST00000533115 SNX21Q969T3 373 aa33.4■■■□□ 2.94
SSSCA1-207ENST00000533115 TIPINQ9BVW5 301 aa33.4■■■□□ 2.94
SSSCA1-207ENST00000533115 ZBP1Q9H171 429 aa33.4■■■□□ 2.94
SSSCA1-207ENST00000533115 MIOSQ9NXC5 875 aa33.4■■■□□ 2.94
SSSCA1-207ENST00000533115 BARX2Q9UMQ3 279 aaPredicted RBP33.4■■■□□ 2.94
SSSCA1-207ENST00000533115 USP20Q9Y2K6 914 aa33.4■■■□□ 2.94
SSSCA1-207ENST00000533115 FAN1Q9Y2M0 1017 aa33.4■■■□□ 2.94
SSSCA1-207ENST00000533115 CCDC169A6NNP5 214 aa33.39■■■□□ 2.94
SSSCA1-207ENST00000533115 MBTPS2O43462 519 aa33.39■■■□□ 2.94
SSSCA1-207ENST00000533115 SSBP05455 408 aaKnown RBP eCLIP33.39■■■□□ 2.94
SSSCA1-207ENST00000533115 GUCY2CP25092 1073 aa33.39■■■□□ 2.94
SSSCA1-207ENST00000533115 LONP1P36776 959 aaKnown RBP33.39■■■□□ 2.94
SSSCA1-207ENST00000533115 UBA7P41226 1012 aa33.39■■■□□ 2.94
SSSCA1-207ENST00000533115 NPTX2P47972 431 aa33.39■■■□□ 2.94
SSSCA1-207ENST00000533115 MAPK7Q13164 816 aa33.39■■■□□ 2.94
SSSCA1-207ENST00000533115 SMAD4Q13485 552 aaKnown RBP33.39■■■□□ 2.94
SSSCA1-207ENST00000533115 VN1R2Q8NFZ6 395 aa33.39■■■□□ 2.94
SSSCA1-207ENST00000533115 PARP2Q9UGN5 583 aa33.39■■■□□ 2.94
SSSCA1-207ENST00000533115 ZMYM2Q9UBW7 1377 aa33.38■■■□□ 2.93
SSSCA1-207ENST00000533115 C2orf71A6NGG8 1288 aa33.38■■■□□ 2.93
SSSCA1-207ENST00000533115 NRP1O14786 923 aa33.38■■■□□ 2.93
SSSCA1-207ENST00000533115 CXCL14O95715 111 aa33.38■■■□□ 2.93
SSSCA1-207ENST00000533115 RBM10P98175 930 aaKnown RBP33.38■■■□□ 2.93
SSSCA1-207ENST00000533115 COASYQ13057 564 aa33.38■■■□□ 2.93
SSSCA1-207ENST00000533115 DMP1Q13316 513 aaPredicted RBP33.38■■■□□ 2.93
SSSCA1-207ENST00000533115 COLGALT2Q8IYK4 626 aa33.38■■■□□ 2.93
SSSCA1-207ENST00000533115 ADPGKQ9BRR6 497 aa33.38■■■□□ 2.93
SSSCA1-207ENST00000533115 C17orf75Q9HAS0 396 aa33.38■■■□□ 2.93
SSSCA1-207ENST00000533115 CLIC4Q9Y696 253 aa33.38■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms