RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 NOTUMQ6P988 496 aa19.74■□□□□ 0.75
SMG1-203ENST00000532700 MRPL43Q8N983 215 aaKnown RBP19.74■□□□□ 0.75
SMG1-203ENST00000532700 PPP2R3CQ969Q6 453 aa19.74■□□□□ 0.75
SMG1-203ENST00000532700 PGBD4Q96DM1 585 aa19.74■□□□□ 0.75
SMG1-203ENST00000532700 LRFN3Q9BTN0 628 aa19.74■□□□□ 0.75
SMG1-203ENST00000532700 CCDC113Q9H0I3 377 aa19.74■□□□□ 0.75
SMG1-203ENST00000532700 BHMT2Q9H2M3 363 aa19.74■□□□□ 0.75
SMG1-203ENST00000532700 DDX19AQ9NUU7 478 aaKnown RBP19.74■□□□□ 0.75
SMG1-203ENST00000532700 KIAA1024Q9UPX6 916 aa19.74■□□□□ 0.75
SMG1-203ENST00000532700 INPPL1O15357 1258 aa19.73■□□□□ 0.75
SMG1-203ENST00000532700 ITGA4P13612 1032 aa19.73■□□□□ 0.75
SMG1-203ENST00000532700 CYP11B2P19099 503 aa19.73■□□□□ 0.75
SMG1-203ENST00000532700 KRT17Q04695 432 aa19.73■□□□□ 0.75
SMG1-203ENST00000532700 SMC1AQ14683 1233 aaKnown RBP19.73■□□□□ 0.75
SMG1-203ENST00000532700 PDE12Q6L8Q7 609 aaKnown RBP19.73■□□□□ 0.75
SMG1-203ENST00000532700 ANKRD54Q6NXT1 300 aa19.73■□□□□ 0.75
SMG1-203ENST00000532700 TMEM184AQ6ZMB5 413 aa19.73■□□□□ 0.75
SMG1-203ENST00000532700 TAS1R1Q7RTX1 841 aa19.73■□□□□ 0.75
SMG1-203ENST00000532700 DDX53Q86TM3 631 aaKnown RBP19.73■□□□□ 0.75
SMG1-203ENST00000532700 SNX29Q8TEQ0 813 aa19.73■□□□□ 0.75
SMG1-203ENST00000532700 SUSD6Q92537 303 aa19.73■□□□□ 0.75
SMG1-203ENST00000532700 RABGGTAQ92696 567 aa19.73■□□□□ 0.75
SMG1-203ENST00000532700 TMEM169Q96HH4 297 aa19.73■□□□□ 0.75
SMG1-203ENST00000532700 NGRNQ9NPE2 291 aaKnown RBP19.73■□□□□ 0.75
SMG1-203ENST00000532700 KLK14Q9P0G3 267 aa19.73■□□□□ 0.75
SMG1-203ENST00000532700 PRKAG3Q9UGI9 489 aa19.73■□□□□ 0.75
SMG1-203ENST00000532700 PUF60Q9UHX1 559 aaKnown RBP19.73■□□□□ 0.75
SMG1-203ENST00000532700 HCFC2Q9Y5Z7 792 aa19.73■□□□□ 0.75
SMG1-203ENST00000532700 CNTNAP2Q9UHC6 1331 aa19.73■□□□□ 0.75
SMG1-203ENST00000532700 ARHGEF35A5YM69 484 aa19.72■□□□□ 0.75
SMG1-203ENST00000532700 NRP1O14786 923 aa19.72■□□□□ 0.75
SMG1-203ENST00000532700 AXLP30530 894 aa19.72■□□□□ 0.75
SMG1-203ENST00000532700 DSC1Q08554 894 aa19.72■□□□□ 0.75
SMG1-203ENST00000532700 EEF1DP3Q658K8 133 aa19.72■□□□□ 0.75
SMG1-203ENST00000532700 COLGALT2Q8IYK4 626 aa19.72■□□□□ 0.75
SMG1-203ENST00000532700 DAW1Q8N136 415 aa19.72■□□□□ 0.75
SMG1-203ENST00000532700 MCPH1Q8NEM0 835 aa19.72■□□□□ 0.75
SMG1-203ENST00000532700 ERMNQ8TAM6 284 aa19.72■□□□□ 0.75
SMG1-203ENST00000532700 LRRC15Q8TF66 581 aa19.72■□□□□ 0.75
SMG1-203ENST00000532700 CDCA3Q99618 268 aaPredicted RBP19.72■□□□□ 0.75
SMG1-203ENST00000532700 RUSC1Q9BVN2 902 aa19.72■□□□□ 0.75
SMG1-203ENST00000532700 FZD8Q9H461 694 aa19.72■□□□□ 0.75
SMG1-203ENST00000532700 PDZD7Q9H5P4 517 aa19.72■□□□□ 0.75
SMG1-203ENST00000532700 PRG3Q9Y2Y8 225 aaPredicted RBP19.72■□□□□ 0.75
SMG1-203ENST00000532700 C2orf16Q68DN1 1984 aa19.72■□□□□ 0.75
SMG1-203ENST00000532700 DENND4AQ7Z401 1863 aa19.71■□□□□ 0.75
SMG1-203ENST00000532700 A0A1B0GUA9 196 aa19.71■□□□□ 0.75
SMG1-203ENST00000532700 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.71■□□□□ 0.75
SMG1-203ENST00000532700 CXCL14O95715 111 aa19.71■□□□□ 0.75
SMG1-203ENST00000532700 EFEMP2O95967 443 aa19.71■□□□□ 0.75
SMG1-203ENST00000532700 SSBP05455 408 aaKnown RBP eCLIP19.71■□□□□ 0.75
SMG1-203ENST00000532700 WEE2P0C1S8 567 aa19.71■□□□□ 0.75
SMG1-203ENST00000532700 EPCAMP16422 314 aa19.71■□□□□ 0.75
SMG1-203ENST00000532700 CA8P35219 290 aa19.71■□□□□ 0.75
SMG1-203ENST00000532700 ATP2C1P98194 919 aaPredicted RBP19.71■□□□□ 0.75
SMG1-203ENST00000532700 PTPN14Q15678 1187 aa19.71■□□□□ 0.75
SMG1-203ENST00000532700 PPP4R3CPQ6ZMV5 832 aa19.71■□□□□ 0.75
SMG1-203ENST00000532700 C12orf76Q8N812 135 aaPredicted RBP19.71■□□□□ 0.75
SMG1-203ENST00000532700 URGCPQ8TCY9 931 aa19.71■□□□□ 0.75
SMG1-203ENST00000532700 PNMA5Q96PV4 448 aa19.71■□□□□ 0.75
SMG1-203ENST00000532700 MUTYHQ9UIF7 546 aa19.71■□□□□ 0.75
SMG1-203ENST00000532700 TRIP11Q15643 1979 aa19.71■□□□□ 0.75
SMG1-203ENST00000532700 CTSAP10619 480 aa19.7■□□□□ 0.74
SMG1-203ENST00000532700 LIG1P18858 919 aa19.7■□□□□ 0.74
SMG1-203ENST00000532700 MAPK7Q13164 816 aa19.7■□□□□ 0.74
SMG1-203ENST00000532700 HAUS3Q68CZ6 603 aa19.7■□□□□ 0.74
SMG1-203ENST00000532700 SLC27A1Q6PCB7 646 aa19.7■□□□□ 0.74
SMG1-203ENST00000532700 CCDC51Q96ER9 411 aa19.7■□□□□ 0.74
SMG1-203ENST00000532700 B3GALT6Q96L58 329 aa19.7■□□□□ 0.74
SMG1-203ENST00000532700 PAAF1Q9BRP4 392 aa19.7■□□□□ 0.74
SMG1-203ENST00000532700 C1QTNF1Q9BXJ1 281 aa19.7■□□□□ 0.74
SMG1-203ENST00000532700 FAM50BQ9Y247 325 aa19.7■□□□□ 0.74
SMG1-203ENST00000532700 LOC730098B7Z3J9 87 aa19.69■□□□□ 0.74
SMG1-203ENST00000532700 LILRB3O75022 631 aa19.69■□□□□ 0.74
SMG1-203ENST00000532700 SP100P23497 879 aaPredicted RBP19.69■□□□□ 0.74
SMG1-203ENST00000532700 IGFBP6P24592 240 aaPredicted RBP19.69■□□□□ 0.74
SMG1-203ENST00000532700 PRPHP41219 470 aa19.69■□□□□ 0.74
SMG1-203ENST00000532700 PDIA5Q14554 519 aa19.69■□□□□ 0.74
SMG1-203ENST00000532700 PCBP1Q15365 356 aaKnown RBP eCLIP19.69■□□□□ 0.741e-7■■■■□ 23.7
SMG1-203ENST00000532700 FAM187BQ17R55 369 aa19.69■□□□□ 0.74
SMG1-203ENST00000532700 NT5DC1Q5TFE4 455 aa19.69■□□□□ 0.74
SMG1-203ENST00000532700 TAS1R3Q7RTX0 852 aa19.69■□□□□ 0.74
SMG1-203ENST00000532700 RNF135Q8IUD6 432 aa19.69■□□□□ 0.74
SMG1-203ENST00000532700 SLC22A17Q8WUG5 538 aa19.69■□□□□ 0.74
SMG1-203ENST00000532700 PLIN2Q99541 437 aa19.69■□□□□ 0.74
SMG1-203ENST00000532700 MYH11P35749 1972 aa19.68■□□□□ 0.74
SMG1-203ENST00000532700 PTGESO14684 152 aa19.68■□□□□ 0.74
SMG1-203ENST00000532700 PRKCBP05771 671 aa19.68■□□□□ 0.74
SMG1-203ENST00000532700 MUTP22033 750 aa19.68■□□□□ 0.74
SMG1-203ENST00000532700 NAMPTP43490 491 aa19.68■□□□□ 0.74
SMG1-203ENST00000532700 GRIN1Q05586 938 aa19.68■□□□□ 0.74
SMG1-203ENST00000532700 RNF168Q8IYW5 571 aaPredicted RBP19.68■□□□□ 0.74
SMG1-203ENST00000532700 CNNM3Q8NE01 707 aa19.68■□□□□ 0.74
SMG1-203ENST00000532700 TMEM175Q9BSA9 504 aa19.68■□□□□ 0.74
SMG1-203ENST00000532700 PRMT7Q9NVM4 692 aaPredicted RBP19.68■□□□□ 0.74
SMG1-203ENST00000532700 SMC3Q9UQE7 1217 aa19.68■□□□□ 0.74
SMG1-203ENST00000532700 FAN1Q9Y2M0 1017 aa19.68■□□□□ 0.74
SMG1-203ENST00000532700 IRAK3Q9Y616 596 aa19.68■□□□□ 0.74
SMG1-203ENST00000532700 VWA8A3KMH1 1905 aa19.67■□□□□ 0.74
SMG1-203ENST00000532700 GPR37L1O60883 481 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms