RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 EMSYQ7Z589 1322 aa15.74■□□□□ 0.11
PCDHA9-202ENST00000532602 KBTBD13C9JR72 458 aa15.73■□□□□ 0.11
PCDHA9-202ENST00000532602 STXBP3O00186 592 aa15.73■□□□□ 0.11
PCDHA9-202ENST00000532602 ANKRD20A4Q4UJ75 823 aa15.73■□□□□ 0.11
PCDHA9-202ENST00000532602 ANKRD20A8PQ5CZ79 823 aa15.73■□□□□ 0.11
PCDHA9-202ENST00000532602 ANKRD20A2Q5SQ80 823 aa15.73■□□□□ 0.11
PCDHA9-202ENST00000532602 ANKRD20A1Q5TYW2 823 aa15.73■□□□□ 0.11
PCDHA9-202ENST00000532602 ZBTB18Q99592 522 aa15.73■□□□□ 0.11
PCDHA9-202ENST00000532602 LGALS16A8MUM7 142 aa15.73■□□□□ 0.11
PCDHA9-202ENST00000532602 MOCS2O96007 188 aaPredicted RBP15.73■□□□□ 0.11
PCDHA9-202ENST00000532602 PRKCBP05771 671 aa15.73■□□□□ 0.11
PCDHA9-202ENST00000532602 SKIV2LQ15477 1246 aaKnown RBP15.73■□□□□ 0.11
PCDHA9-202ENST00000532602 GINM1Q9NU53 330 aa15.73■□□□□ 0.11
PCDHA9-202ENST00000532602 POLRMTO00411 1230 aaKnown RBP15.73■□□□□ 0.11
PCDHA9-202ENST00000532602 KRT7P08729 469 aa15.73■□□□□ 0.11
PCDHA9-202ENST00000532602 EFHC2Q5JST6 749 aa15.73■□□□□ 0.11
PCDHA9-202ENST00000532602 OLA1Q9NTK5 396 aaKnown RBP15.73■□□□□ 0.11
PCDHA9-202ENST00000532602 PXDNLA1KZ92 1463 aa15.73■□□□□ 0.11
PCDHA9-202ENST00000532602 A8MXQ7 604 aa15.73■□□□□ 0.11
PCDHA9-202ENST00000532602 GOLGA8MH3BSY2 632 aa15.73■□□□□ 0.11
PCDHA9-202ENST00000532602 RALAP11233 206 aa15.73■□□□□ 0.11
PCDHA9-202ENST00000532602 ACOT2P49753 483 aa15.73■□□□□ 0.11
PCDHA9-202ENST00000532602 DUOXA2Q1HG44 320 aa15.73■□□□□ 0.11
PCDHA9-202ENST00000532602 HAUS6Q7Z4H7 955 aa15.73■□□□□ 0.11
PCDHA9-202ENST00000532602 PPWD1Q96BP3 646 aaKnown RBP15.73■□□□□ 0.11
PCDHA9-202ENST00000532602 SPDL1Q96EA4 605 aa15.73■□□□□ 0.11
PCDHA9-202ENST00000532602 DDX50Q9BQ39 737 aaKnown RBP15.73■□□□□ 0.11
PCDHA9-202ENST00000532602 ABHD10Q9NUJ1 306 aa15.73■□□□□ 0.11
PCDHA9-202ENST00000532602 CAPN7Q9Y6W3 813 aa15.73■□□□□ 0.11
PCDHA9-202ENST00000532602 ANTXR2P58335 489 aa15.73■□□□□ 0.11
PCDHA9-202ENST00000532602 DRAP1Q14919 205 aaPredicted RBP15.73■□□□□ 0.11
PCDHA9-202ENST00000532602 FRA10AC1Q70Z53 315 aa15.73■□□□□ 0.11
PCDHA9-202ENST00000532602 EXT2Q93063 718 aa15.73■□□□□ 0.11
PCDHA9-202ENST00000532602 EXOC4Q96A65 974 aa15.73■□□□□ 0.11
PCDHA9-202ENST00000532602 ATG4CQ96DT6 458 aa15.73■□□□□ 0.11
PCDHA9-202ENST00000532602 PPFIA2O75334 1257 aa15.72■□□□□ 0.11
PCDHA9-202ENST00000532602 KRT38O76015 456 aa15.72■□□□□ 0.11
PCDHA9-202ENST00000532602 IL1RL1Q01638 556 aa15.72■□□□□ 0.11
PCDHA9-202ENST00000532602 SUN2Q9UH99 717 aa15.72■□□□□ 0.11
PCDHA9-202ENST00000532602 FBXO2Q9UK22 296 aaPredicted RBP15.72■□□□□ 0.11
PCDHA9-202ENST00000532602 IQGAP1P46940 1657 aa15.72■□□□□ 0.11
PCDHA9-202ENST00000532602 NAALADL2Q58DX5 795 aa15.72■□□□□ 0.11
PCDHA9-202ENST00000532602 ITPRIPL1Q6GPH6 555 aa15.72■□□□□ 0.11
PCDHA9-202ENST00000532602 CC2D1AQ6P1N0 951 aaPredicted RBP15.72■□□□□ 0.11
PCDHA9-202ENST00000532602 TADA2BQ86TJ2 420 aa15.72■□□□□ 0.11
PCDHA9-202ENST00000532602 IL25Q9H293 177 aa15.72■□□□□ 0.11
PCDHA9-202ENST00000532602 JMJD4Q9H9V9 463 aa15.72■□□□□ 0.11
PCDHA9-202ENST00000532602 CDR2Q01850 454 aa15.72■□□□□ 0.11
PCDHA9-202ENST00000532602 TACO1Q9BSH4 297 aaKnown RBP15.72■□□□□ 0.11
PCDHA9-202ENST00000532602 WDR91A4D1P6 747 aa15.72■□□□□ 0.11
PCDHA9-202ENST00000532602 TEX33O43247 280 aa15.72■□□□□ 0.11
PCDHA9-202ENST00000532602 FGGP02679 453 aa15.72■□□□□ 0.11
PCDHA9-202ENST00000532602 MYBL1P10243 752 aa15.72■□□□□ 0.11
PCDHA9-202ENST00000532602 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.72■□□□□ 0.11
PCDHA9-202ENST00000532602 GUF1Q8N442 669 aaKnown RBP15.72■□□□□ 0.11
PCDHA9-202ENST00000532602 LRRC71Q8N4P6 559 aa15.72■□□□□ 0.11
PCDHA9-202ENST00000532602 CDC26Q8NHZ8 85 aa15.72■□□□□ 0.11
PCDHA9-202ENST00000532602 PGBD4Q96DM1 585 aa15.72■□□□□ 0.11
PCDHA9-202ENST00000532602 NUP85Q9BW27 656 aa15.72■□□□□ 0.11
PCDHA9-202ENST00000532602 TRPV6Q9H1D0 765 aa15.72■□□□□ 0.11
PCDHA9-202ENST00000532602 YWHAHQ04917 246 aaPredicted RBP15.72■□□□□ 0.11
PCDHA9-202ENST00000532602 DHX40Q8IX18 779 aaKnown RBP15.72■□□□□ 0.11
PCDHA9-202ENST00000532602 SCYL3Q8IZE3 742 aa15.72■□□□□ 0.11
PCDHA9-202ENST00000532602 SLC16A10Q8TF71 515 aa15.72■□□□□ 0.11
PCDHA9-202ENST00000532602 TUFT1Q9NNX1 390 aa15.72■□□□□ 0.11
PCDHA9-202ENST00000532602 NYAP2Q9P242 653 aa15.72■□□□□ 0.11
PCDHA9-202ENST00000532602 ANKRD40Q6AI12 368 aa15.71■□□□□ 0.11
PCDHA9-202ENST00000532602 SLC8A1P32418 973 aa15.71■□□□□ 0.11
PCDHA9-202ENST00000532602 YAF2Q8IY57 180 aa15.71■□□□□ 0.11
PCDHA9-202ENST00000532602 N4BP2L2Q92802 583 aaPredicted RBP15.71■□□□□ 0.11
PCDHA9-202ENST00000532602 ASIC4Q96FT7 647 aa15.71■□□□□ 0.11
PCDHA9-202ENST00000532602 ZMYND12Q9H0C1 365 aa15.71■□□□□ 0.11
PCDHA9-202ENST00000532602 ZNF212Q9UDV6 495 aa15.71■□□□□ 0.11
PCDHA9-202ENST00000532602 NCK2O43639 380 aa15.71■□□□□ 0.11
PCDHA9-202ENST00000532602 ADCY2Q08462 1091 aa15.71■□□□□ 0.11
PCDHA9-202ENST00000532602 ZNF211Q13398 564 aaPredicted RBP15.71■□□□□ 0.11
PCDHA9-202ENST00000532602 XKR3Q5GH77 459 aa15.71■□□□□ 0.11
PCDHA9-202ENST00000532602 GLYCTKQ8IVS8 523 aa15.71■□□□□ 0.11
PCDHA9-202ENST00000532602 GIPC2Q8TF65 315 aa15.71■□□□□ 0.11
PCDHA9-202ENST00000532602 EYA4O95677 639 aa15.71■□□□□ 0.11
PCDHA9-202ENST00000532602 CCT5P48643 541 aa15.71■□□□□ 0.11
PCDHA9-202ENST00000532602 PSMC1P62191 440 aaKnown RBP15.71■□□□□ 0.11
PCDHA9-202ENST00000532602 OCRLQ01968 901 aa15.71■□□□□ 0.11
PCDHA9-202ENST00000532602 BTBD8Q5XKL5 378 aa15.71■□□□□ 0.11
PCDHA9-202ENST00000532602 RNF25Q96BH1 459 aaPredicted RBP15.71■□□□□ 0.11
PCDHA9-202ENST00000532602 TAAR1Q96RJ0 339 aa15.71■□□□□ 0.11
PCDHA9-202ENST00000532602 EDEM3Q9BZQ6 932 aa15.71■□□□□ 0.11
PCDHA9-202ENST00000532602 FBXO28Q9NVF7 368 aa15.71■□□□□ 0.11
PCDHA9-202ENST00000532602 SNX2O60749 519 aa15.71■□□□□ 0.1
PCDHA9-202ENST00000532602 OPHN1O60890 802 aa15.71■□□□□ 0.1
PCDHA9-202ENST00000532602 MYBP10242 640 aa15.71■□□□□ 0.1
PCDHA9-202ENST00000532602 CAV1Q03135 178 aa15.71■□□□□ 0.1
PCDHA9-202ENST00000532602 ZKSCAN8Q15776 578 aaPredicted RBP15.71■□□□□ 0.1
PCDHA9-202ENST00000532602 C6orf118Q5T5N4 469 aa15.71■□□□□ 0.1
PCDHA9-202ENST00000532602 EFHBQ8N7U6 833 aa15.71■□□□□ 0.1
PCDHA9-202ENST00000532602 ZNF512BQ96KM6 892 aaPredicted RBP15.71■□□□□ 0.1
PCDHA9-202ENST00000532602 MAD2L2Q9UI95 211 aa15.71■□□□□ 0.1
PCDHA9-202ENST00000532602 TSR3Q9UJK0 312 aaKnown RBP15.71■□□□□ 0.1
PCDHA9-202ENST00000532602 NCOA3Q9Y6Q9 1424 aa15.71■□□□□ 0.1
PCDHA9-202ENST00000532602 CTNND1O60716 968 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms