RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 MRPL43Q8N983 215 aaKnown RBP19.05■□□□□ 0.64
PHRF1-204ENST00000532550 DEPTORQ8TB45 409 aa19.05■□□□□ 0.64
PHRF1-204ENST00000532550 IGSF21Q96ID5 467 aa19.05■□□□□ 0.64
PHRF1-204ENST00000532550 APOL6Q9BWW8 343 aa19.05■□□□□ 0.64
PHRF1-204ENST00000532550 POLD4Q9HCU8 107 aa19.05■□□□□ 0.64
PHRF1-204ENST00000532550 CLEC1BQ9P126 229 aa19.05■□□□□ 0.64
PHRF1-204ENST00000532550 DNAJB4Q9UDY4 337 aa19.05■□□□□ 0.64
PHRF1-204ENST00000532550 FAN1Q9Y2M0 1017 aa19.05■□□□□ 0.64
PHRF1-204ENST00000532550 HES2Q9Y543 173 aa19.05■□□□□ 0.64
PHRF1-204ENST00000532550 VWA3AA6NCI4 1184 aa19.04■□□□□ 0.64
PHRF1-204ENST00000532550 ARL5CA6NH57 179 aa19.04■□□□□ 0.64
PHRF1-204ENST00000532550 MBTPS2O43462 519 aa19.04■□□□□ 0.64
PHRF1-204ENST00000532550 DDHD2O94830 711 aa19.04■□□□□ 0.64
PHRF1-204ENST00000532550 NPTXRO95502 500 aa19.04■□□□□ 0.64
PHRF1-204ENST00000532550 SRGAP2BP0DMP2 458 aa19.04■□□□□ 0.64
PHRF1-204ENST00000532550 PDCP20941 246 aa19.04■□□□□ 0.64
PHRF1-204ENST00000532550 SLC11A1P49279 550 aa19.04■□□□□ 0.64
PHRF1-204ENST00000532550 AFF1P51825 1210 aaKnown RBP19.04■□□□□ 0.64
PHRF1-204ENST00000532550 SMAD4Q13485 552 aaKnown RBP19.04■□□□□ 0.64
PHRF1-204ENST00000532550 FAM187BQ17R55 369 aa19.04■□□□□ 0.64
PHRF1-204ENST00000532550 ARL6IP4Q66PJ3 421 aaKnown RBP19.04■□□□□ 0.64
PHRF1-204ENST00000532550 BRAPQ7Z569 592 aa19.04■□□□□ 0.64
PHRF1-204ENST00000532550 DDX53Q86TM3 631 aaKnown RBP19.04■□□□□ 0.64
PHRF1-204ENST00000532550 CDR2LQ86X02 465 aaPredicted RBP19.04■□□□□ 0.64
PHRF1-204ENST00000532550 TMEM87AQ8NBN3 555 aa19.04■□□□□ 0.64
PHRF1-204ENST00000532550 BSNDQ8WZ55 320 aa19.04■□□□□ 0.64
PHRF1-204ENST00000532550 MSLNLQ96KJ4 702 aa19.04■□□□□ 0.64
PHRF1-204ENST00000532550 GAD1Q99259 594 aa19.04■□□□□ 0.64
PHRF1-204ENST00000532550 TMEM175Q9BSA9 504 aa19.04■□□□□ 0.64
PHRF1-204ENST00000532550 PRKAG3Q9UGI9 489 aa19.04■□□□□ 0.64
PHRF1-204ENST00000532550 GIT1Q9Y2X7 761 aa19.04■□□□□ 0.64
PHRF1-204ENST00000532550 GLP2RO95838 553 aa19.03■□□□□ 0.64
PHRF1-204ENST00000532550 LIG1P18858 919 aa19.03■□□□□ 0.64
PHRF1-204ENST00000532550 COASYQ13057 564 aa19.03■□□□□ 0.64
PHRF1-204ENST00000532550 PRPF4BQ13523 1007 aaKnown RBP19.03■□□□□ 0.64
PHRF1-204ENST00000532550 SMAD2Q15796 467 aaKnown RBP19.03■□□□□ 0.64
PHRF1-204ENST00000532550 TMEM173Q86WV6 379 aaPredicted RBP19.03■□□□□ 0.64
PHRF1-204ENST00000532550 CDK5RAP3Q96JB5 506 aa19.03■□□□□ 0.64
PHRF1-204ENST00000532550 MMTAG2Q9BU76 263 aaKnown RBP19.03■□□□□ 0.64
PHRF1-204ENST00000532550 CD320Q9NPF0 282 aa19.03■□□□□ 0.64
PHRF1-204ENST00000532550 STK39Q9UEW8 545 aa19.03■□□□□ 0.64
PHRF1-204ENST00000532550 PARP2Q9UGN5 583 aa19.03■□□□□ 0.64
PHRF1-204ENST00000532550 BARX2Q9UMQ3 279 aaPredicted RBP19.03■□□□□ 0.64
PHRF1-204ENST00000532550 C2orf71A6NGG8 1288 aa19.02■□□□□ 0.64
PHRF1-204ENST00000532550 ACKR2O00590 384 aa19.02■□□□□ 0.64
PHRF1-204ENST00000532550 NRP1O14786 923 aa19.02■□□□□ 0.64
PHRF1-204ENST00000532550 N4BP3O15049 544 aa19.02■□□□□ 0.64
PHRF1-204ENST00000532550 NR1I2O75469 434 aa19.02■□□□□ 0.64
PHRF1-204ENST00000532550 PRKCBP05771 671 aa19.02■□□□□ 0.64
PHRF1-204ENST00000532550 AKAP5P24588 427 aa19.02■□□□□ 0.64
PHRF1-204ENST00000532550 MLH1P40692 756 aa19.02■□□□□ 0.64
PHRF1-204ENST00000532550 EFNA5P52803 228 aa19.02■□□□□ 0.64
PHRF1-204ENST00000532550 GIT2Q14161 759 aa19.02■□□□□ 0.64
PHRF1-204ENST00000532550 TMEM184AQ6ZMB5 413 aa19.02■□□□□ 0.64
PHRF1-204ENST00000532550 KCTD17Q8N5Z5 321 aa19.02■□□□□ 0.64
PHRF1-204ENST00000532550 ADPGKQ9BRR6 497 aa19.02■□□□□ 0.64
PHRF1-204ENST00000532550 NT5C3AQ9H0P0 336 aa19.02■□□□□ 0.64
PHRF1-204ENST00000532550 NXF3Q9H4D5 531 aaKnown RBP19.02■□□□□ 0.64
PHRF1-204ENST00000532550 VPS37CA5D8V6 355 aaPredicted RBP19.01■□□□□ 0.63
PHRF1-204ENST00000532550 CCDC169A6NNP5 214 aa19.01■□□□□ 0.63
PHRF1-204ENST00000532550 K7ERI5 159 aa19.01■□□□□ 0.63
PHRF1-204ENST00000532550 INPPL1O15357 1258 aa19.01■□□□□ 0.63
PHRF1-204ENST00000532550 B4GALT3O60512 393 aa19.01■□□□□ 0.63
PHRF1-204ENST00000532550 BMP15O95972 392 aa19.01■□□□□ 0.63
PHRF1-204ENST00000532550 OR1G1P47890 313 aa19.01■□□□□ 0.63
PHRF1-204ENST00000532550 RBM10P98175 930 aaKnown RBP19.01■□□□□ 0.63
PHRF1-204ENST00000532550 RINT1Q6NUQ1 792 aa19.01■□□□□ 0.63
PHRF1-204ENST00000532550 LLGL2Q6P1M3 1020 aa19.01■□□□□ 0.63
PHRF1-204ENST00000532550 ADHFE1Q8IWW8 467 aa19.01■□□□□ 0.63
PHRF1-204ENST00000532550 VN1R2Q8NFZ6 395 aa19.01■□□□□ 0.63
PHRF1-204ENST00000532550 ZFP42Q96MM3 310 aa19.01■□□□□ 0.63
PHRF1-204ENST00000532550 ZBP1Q9H171 429 aa19.01■□□□□ 0.63
PHRF1-204ENST00000532550 MIOSQ9NXC5 875 aa19.01■□□□□ 0.63
PHRF1-204ENST00000532550 HIP1RO75146 1068 aa19■□□□□ 0.63
PHRF1-204ENST00000532550 SSBP05455 408 aaKnown RBP eCLIP19■□□□□ 0.63
PHRF1-204ENST00000532550 CTSAP10619 480 aa19■□□□□ 0.63
PHRF1-204ENST00000532550 SCNN1GP51170 649 aa19■□□□□ 0.63
PHRF1-204ENST00000532550 HYIQ5T013 277 aa19■□□□□ 0.63
PHRF1-204ENST00000532550 C1orf186Q6ZWK4 172 aa19■□□□□ 0.63
PHRF1-204ENST00000532550 KCNK18Q7Z418 384 aa19■□□□□ 0.63
PHRF1-204ENST00000532550 COLGALT2Q8IYK4 626 aa19■□□□□ 0.63
PHRF1-204ENST00000532550 SMRP1Q8NCR6 262 aa19■□□□□ 0.63
PHRF1-204ENST00000532550 BCL7CQ8WUZ0 217 aaPredicted RBP19■□□□□ 0.63
PHRF1-204ENST00000532550 AK8Q96MA6 479 aa19■□□□□ 0.63
PHRF1-204ENST00000532550 DRC1Q96MC2 740 aa19■□□□□ 0.63
PHRF1-204ENST00000532550 PLIN2Q99541 437 aa19■□□□□ 0.63
PHRF1-204ENST00000532550 POP1Q99575 1024 aaKnown RBP19■□□□□ 0.63
PHRF1-204ENST00000532550 C1QTNF1Q9BXJ1 281 aa19■□□□□ 0.63
PHRF1-204ENST00000532550 CCDC113Q9H0I3 377 aa19■□□□□ 0.63
PHRF1-204ENST00000532550 KLK14Q9P0G3 267 aa19■□□□□ 0.63
PHRF1-204ENST00000532550 DAXXQ9UER7 740 aaPredicted RBP19■□□□□ 0.63
PHRF1-204ENST00000532550 IRAK3Q9Y616 596 aa19■□□□□ 0.63
PHRF1-204ENST00000532550 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.99■□□□□ 0.63
PHRF1-204ENST00000532550 TTLL13PA6NNM8 815 aa18.99■□□□□ 0.63
PHRF1-204ENST00000532550 CLASP2O75122 1294 aaKnown RBP18.99■□□□□ 0.63
PHRF1-204ENST00000532550 UBA7P41226 1012 aa18.99■□□□□ 0.63
PHRF1-204ENST00000532550 PEX3P56589 373 aa18.99■□□□□ 0.63
PHRF1-204ENST00000532550 ZP2Q05996 745 aa18.99■□□□□ 0.63
PHRF1-204ENST00000532550 DMP1Q13316 513 aaPredicted RBP18.99■□□□□ 0.63
PHRF1-204ENST00000532550 KCNC3Q14003 757 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms