RNA–Protein interactions for RNA: ENST00000531885.5

CMTM1-215, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-215ENST00000531885 BLIDQ8IZY5 108 aa12.9□□□□□ -0.34
CMTM1-215ENST00000531885 FAM177A1Q8N128 213 aaPredicted RBP12.9□□□□□ -0.34
CMTM1-215ENST00000531885 PRPF31Q8WWY3 499 aaKnown RBP12.9□□□□□ -0.34
CMTM1-215ENST00000531885 SHDQ96IW2 340 aa12.9□□□□□ -0.34
CMTM1-215ENST00000531885 ZDHHC7Q9NXF8 308 aa12.9□□□□□ -0.34
CMTM1-215ENST00000531885 SIT1Q9Y3P8 196 aa12.9□□□□□ -0.34
CMTM1-215ENST00000531885 LILRB3O75022 631 aa12.89□□□□□ -0.35
CMTM1-215ENST00000531885 DEXIO95424 95 aa12.89□□□□□ -0.35
CMTM1-215ENST00000531885 C1RP00736 705 aa12.89□□□□□ -0.35
CMTM1-215ENST00000531885 CPA1P15085 419 aa12.89□□□□□ -0.35
CMTM1-215ENST00000531885 RPS6KB1P23443 525 aa12.89□□□□□ -0.35
CMTM1-215ENST00000531885 CCT2P78371 535 aaKnown RBP12.89□□□□□ -0.35
CMTM1-215ENST00000531885 LAMTOR4Q0VGL1 99 aa12.89□□□□□ -0.35
CMTM1-215ENST00000531885 TFDP1Q14186 410 aa12.89□□□□□ -0.35
CMTM1-215ENST00000531885 PHLDB3Q6NSJ2 640 aa12.89□□□□□ -0.35
CMTM1-215ENST00000531885 GET4Q7L5D6 327 aaPredicted RBP12.89□□□□□ -0.35
CMTM1-215ENST00000531885 KRT25Q7Z3Z0 450 aa12.89□□□□□ -0.35
CMTM1-215ENST00000531885 FBXL16Q8N461 479 aa12.89□□□□□ -0.35
CMTM1-215ENST00000531885 SLC44A3Q8N4M1 653 aa12.89□□□□□ -0.35
CMTM1-215ENST00000531885 RNF149Q8NC42 400 aa12.89□□□□□ -0.35
CMTM1-215ENST00000531885 ETNPPLQ8TBG4 499 aa12.89□□□□□ -0.35
CMTM1-215ENST00000531885 RIN2Q8WYP3 895 aaPredicted RBP12.89□□□□□ -0.35
CMTM1-215ENST00000531885 TMEM143Q96AN5 459 aa12.89□□□□□ -0.35
CMTM1-215ENST00000531885 FAM20AQ96MK3 541 aa12.89□□□□□ -0.35
CMTM1-215ENST00000531885 CCDC43Q96MW1 224 aaKnown RBP12.89□□□□□ -0.35
CMTM1-215ENST00000531885 CEP89Q96ST8 783 aa12.89□□□□□ -0.35
CMTM1-215ENST00000531885 NAP1L4Q99733 375 aaKnown RBP12.89□□□□□ -0.35
CMTM1-215ENST00000531885 RXFP1Q9HBX9 757 aa12.89□□□□□ -0.35
CMTM1-215ENST00000531885 ARHGEF3Q9NR81 526 aa12.89□□□□□ -0.35
CMTM1-215ENST00000531885 ZFP37Q9Y6Q3 630 aaPredicted RBP12.89□□□□□ -0.35
CMTM1-215ENST00000531885 CCDC194A0A1B0GVG4 234 aa12.88□□□□□ -0.35
CMTM1-215ENST00000531885 KRBA1A5PL33 1030 aa12.88□□□□□ -0.35
CMTM1-215ENST00000531885 ARL5CA6NH57 179 aa12.88□□□□□ -0.35
CMTM1-215ENST00000531885 B4GALT3O60512 393 aa12.88□□□□□ -0.35
CMTM1-215ENST00000531885 RFPL2O75678 378 aa12.88□□□□□ -0.35
CMTM1-215ENST00000531885 STBD1O95210 358 aa12.88□□□□□ -0.35
CMTM1-215ENST00000531885 XBP1P17861 261 aa12.88□□□□□ -0.35
CMTM1-215ENST00000531885 MLH1P40692 756 aa12.88□□□□□ -0.35
CMTM1-215ENST00000531885 NPEPPSP55786 919 aa12.88□□□□□ -0.35
CMTM1-215ENST00000531885 DSG1Q02413 1049 aa12.88□□□□□ -0.35
CMTM1-215ENST00000531885 PPP2R5CQ13362 524 aa12.88□□□□□ -0.35
CMTM1-215ENST00000531885 MXD4Q14582 209 aaPredicted RBP12.88□□□□□ -0.35
CMTM1-215ENST00000531885 PUM1Q14671 1186 aaKnown RBP eCLIP12.88□□□□□ -0.35
CMTM1-215ENST00000531885 NTRK3Q16288 839 aa12.88□□□□□ -0.35
CMTM1-215ENST00000531885 USP41Q3LFD5 358 aa12.88□□□□□ -0.35
CMTM1-215ENST00000531885 DCLRE1AQ6PJP8 1040 aa12.88□□□□□ -0.35
CMTM1-215ENST00000531885 B3GNT9Q6UX72 402 aa12.88□□□□□ -0.35
CMTM1-215ENST00000531885 PALB2Q86YC2 1186 aa12.88□□□□□ -0.35
CMTM1-215ENST00000531885 KIAA2013Q8IYS2 634 aa12.88□□□□□ -0.35
CMTM1-215ENST00000531885 RSAD2Q8WXG1 361 aa12.88□□□□□ -0.35
CMTM1-215ENST00000531885 RUBCNQ92622 972 aa12.88□□□□□ -0.35
CMTM1-215ENST00000531885 MTRQ99707 1265 aa12.88□□□□□ -0.35
CMTM1-215ENST00000531885 DHX33Q9H6R0 707 aaKnown RBP12.88□□□□□ -0.35
CMTM1-215ENST00000531885 GIT1Q9Y2X7 761 aa12.88□□□□□ -0.35
CMTM1-215ENST00000531885 IPPQ9Y573 584 aa12.88□□□□□ -0.35
CMTM1-215ENST00000531885 R4GN57 208 aa12.88□□□□□ -0.35
CMTM1-215ENST00000531885 CACNA1AO00555 2505 aa12.88□□□□□ -0.35
CMTM1-215ENST00000531885 INO80B-WBP1J3KQ70 363 aa12.87□□□□□ -0.35
CMTM1-215ENST00000531885 KINO60870 393 aaKnown RBP12.87□□□□□ -0.35
CMTM1-215ENST00000531885 N4BP1O75113 896 aaKnown RBP12.87□□□□□ -0.35
CMTM1-215ENST00000531885 DCNP07585 359 aaKnown RBP12.87□□□□□ -0.35
CMTM1-215ENST00000531885 MYBP10242 640 aa12.87□□□□□ -0.35
CMTM1-215ENST00000531885 GCFC2P16383 781 aaKnown RBP12.87□□□□□ -0.35
CMTM1-215ENST00000531885 PDIA3P30101 505 aaKnown RBP12.87□□□□□ -0.35
CMTM1-215ENST00000531885 HOXA11P31270 313 aaPredicted RBP12.87□□□□□ -0.35
CMTM1-215ENST00000531885 YWHABP31946 246 aaKnown RBP12.87□□□□□ -0.35
CMTM1-215ENST00000531885 SCNN1GP51170 649 aa12.87□□□□□ -0.35
CMTM1-215ENST00000531885 EMC2Q15006 297 aa12.87□□□□□ -0.35
CMTM1-215ENST00000531885 XKR9Q5GH70 373 aa12.87□□□□□ -0.35
CMTM1-215ENST00000531885 LIN9Q5TKA1 542 aa12.87□□□□□ -0.35
CMTM1-215ENST00000531885 KIAA0319Q5VV43 1072 aa12.87□□□□□ -0.35
CMTM1-215ENST00000531885 FERMT3Q86UX7 667 aa12.87□□□□□ -0.35
CMTM1-215ENST00000531885 C1orf210Q8IVY1 113 aa12.87□□□□□ -0.35
CMTM1-215ENST00000531885 COLGALT2Q8IYK4 626 aa12.87□□□□□ -0.35
CMTM1-215ENST00000531885 GPR65Q8IYL9 337 aa12.87□□□□□ -0.35
CMTM1-215ENST00000531885 DAGLBQ8NCG7 672 aa12.87□□□□□ -0.35
CMTM1-215ENST00000531885 GPR152Q8TDT2 470 aa12.87□□□□□ -0.35
CMTM1-215ENST00000531885 SECISBP2LQ93073 1101 aaKnown RBP12.87□□□□□ -0.35
CMTM1-215ENST00000531885 BORCS6Q96GS4 357 aa12.87□□□□□ -0.35
CMTM1-215ENST00000531885 MBOAT7Q96N66 472 aa12.87□□□□□ -0.35
CMTM1-215ENST00000531885 MYADMQ96S97 322 aa12.87□□□□□ -0.35
CMTM1-215ENST00000531885 GAD1Q99259 594 aa12.87□□□□□ -0.35
CMTM1-215ENST00000531885 LXNQ9BS40 222 aa12.87□□□□□ -0.35
CMTM1-215ENST00000531885 APOL6Q9BWW8 343 aa12.87□□□□□ -0.35
CMTM1-215ENST00000531885 NCOA5Q9HCD5 579 aaKnown RBP12.87□□□□□ -0.35
CMTM1-215ENST00000531885 BMP2KQ9NSY1 1161 aaPredicted RBP12.87□□□□□ -0.35
CMTM1-215ENST00000531885 MARCH5Q9NX47 278 aa12.87□□□□□ -0.35
CMTM1-215ENST00000531885 FNIP2Q9P278 1114 aa12.87□□□□□ -0.35
CMTM1-215ENST00000531885 TDRD15B5MCY1 1934 aaKnown RBP12.86□□□□□ -0.35
CMTM1-215ENST00000531885 TGM5O43548 720 aa12.86□□□□□ -0.35
CMTM1-215ENST00000531885 EDIL3O43854 480 aa12.86□□□□□ -0.35
CMTM1-215ENST00000531885 TADA2AO75478 443 aa12.86□□□□□ -0.35
CMTM1-215ENST00000531885 REC8O95072 547 aa12.86□□□□□ -0.35
CMTM1-215ENST00000531885 BAG4O95429 457 aaKnown RBP12.86□□□□□ -0.35
CMTM1-215ENST00000531885 SPATA31D3P0C874 917 aa12.86□□□□□ -0.35
CMTM1-215ENST00000531885 LAMP2P13473 410 aa12.86□□□□□ -0.35
CMTM1-215ENST00000531885 FSHRP23945 695 aa12.86□□□□□ -0.35
CMTM1-215ENST00000531885 AFF1P51825 1210 aaKnown RBP12.86□□□□□ -0.35
CMTM1-215ENST00000531885 EPHA7Q15375 998 aa12.86□□□□□ -0.35
CMTM1-215ENST00000531885 INF2Q27J81 1249 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms