RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 RPUSD2Q8IZ73 545 aaKnown RBP18.57■□□□□ 0.56
BRCA2-204ENST00000530893 EPS8L1Q8TE68 723 aa18.57■□□□□ 0.56
BRCA2-204ENST00000530893 PARD3BQ8TEW8 1205 aa18.57■□□□□ 0.56
BRCA2-204ENST00000530893 SLC20A1Q8WUM9 679 aa18.57■□□□□ 0.56
BRCA2-204ENST00000530893 SHC3Q92529 594 aa18.57■□□□□ 0.56
BRCA2-204ENST00000530893 FBXL18Q96ME1 805 aa18.57■□□□□ 0.56
BRCA2-204ENST00000530893 PLEKHA4Q9H4M7 779 aa18.57■□□□□ 0.56
BRCA2-204ENST00000530893 TMEM8AQ9HCN3 771 aa18.57■□□□□ 0.56
BRCA2-204ENST00000530893 AMACRQ9UHK6 382 aa18.57■□□□□ 0.56
BRCA2-204ENST00000530893 KCNG1Q9UIX4 513 aa18.57■□□□□ 0.56
BRCA2-204ENST00000530893 COG5Q9UP83 839 aa18.57■□□□□ 0.56
BRCA2-204ENST00000530893 WDR81Q562E7 1941 aa18.57■□□□□ 0.56
BRCA2-204ENST00000530893 CCDC169A6NNP5 214 aa18.57■□□□□ 0.56
BRCA2-204ENST00000530893 HMGB1P1B2RPK0 211 aaPredicted RBP18.57■□□□□ 0.56
BRCA2-204ENST00000530893 STAM2O75886 525 aa18.57■□□□□ 0.56
BRCA2-204ENST00000530893 ADRB2P07550 413 aa18.57■□□□□ 0.56
BRCA2-204ENST00000530893 NR3C2P08235 984 aa18.57■□□□□ 0.56
BRCA2-204ENST00000530893 ADSSP30520 456 aa18.57■□□□□ 0.56
BRCA2-204ENST00000530893 GPC3P51654 580 aa18.57■□□□□ 0.56
BRCA2-204ENST00000530893 DGKZQ13574 1117 aa18.57■□□□□ 0.56
BRCA2-204ENST00000530893 BAATQ14032 418 aaPredicted RBP18.57■□□□□ 0.56
BRCA2-204ENST00000530893 TRADDQ15628 312 aa18.57■□□□□ 0.56
BRCA2-204ENST00000530893 PLA2G4FQ68DD2 849 aa18.57■□□□□ 0.56
BRCA2-204ENST00000530893 SCYL3Q8IZE3 742 aa18.57■□□□□ 0.56
BRCA2-204ENST00000530893 UBL4BQ8N7F7 174 aa18.57■□□□□ 0.56
BRCA2-204ENST00000530893 MCPH1Q8NEM0 835 aa18.57■□□□□ 0.56
BRCA2-204ENST00000530893 ATG4CQ96DT6 458 aa18.57■□□□□ 0.56
BRCA2-204ENST00000530893 C12orf42Q96LP6 360 aa18.57■□□□□ 0.56
BRCA2-204ENST00000530893 KMT5AQ9NQR1 393 aa18.57■□□□□ 0.56
BRCA2-204ENST00000530893 CTTNBP2NLQ9P2B4 639 aa18.57■□□□□ 0.56
BRCA2-204ENST00000530893 ZNF112Q9UJU3 913 aa18.57■□□□□ 0.56
BRCA2-204ENST00000530893 NOCTQ9UK39 431 aaKnown RBP18.57■□□□□ 0.56
BRCA2-204ENST00000530893 ALG6Q9Y672 507 aa18.57■□□□□ 0.56
BRCA2-204ENST00000530893 NFASCO94856 1347 aa18.56■□□□□ 0.56
BRCA2-204ENST00000530893 TMEM150BA6NC51 233 aa18.56■□□□□ 0.56
BRCA2-204ENST00000530893 ITGA4P13612 1032 aa18.56■□□□□ 0.56
BRCA2-204ENST00000530893 SPDYCQ5MJ68 293 aa18.56■□□□□ 0.56
BRCA2-204ENST00000530893 DCAF12L1Q5VU92 463 aa18.56■□□□□ 0.56
BRCA2-204ENST00000530893 KDM7AQ6ZMT4 941 aa18.56■□□□□ 0.56
BRCA2-204ENST00000530893 NSUN6Q8TEA1 469 aaKnown RBP18.56■□□□□ 0.56
BRCA2-204ENST00000530893 FAM81BQ96LP2 452 aa18.56■□□□□ 0.56
BRCA2-204ENST00000530893 MFSD14AQ96MC6 490 aa18.56■□□□□ 0.56
BRCA2-204ENST00000530893 SH2D3AQ9BRG2 576 aa18.56■□□□□ 0.56
BRCA2-204ENST00000530893 TSPYL1Q9H0U9 437 aa18.56■□□□□ 0.56
BRCA2-204ENST00000530893 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.56■□□□□ 0.56
BRCA2-204ENST00000530893 ADAMTS5Q9UNA0 930 aa18.56■□□□□ 0.56
BRCA2-204ENST00000530893 DENND3A2RUS2 1198 aa18.56■□□□□ 0.56
BRCA2-204ENST00000530893 GOLGA6L10A6NI86 522 aa18.56■□□□□ 0.56
BRCA2-204ENST00000530893 H0YCG3 227 aa18.56■□□□□ 0.56
BRCA2-204ENST00000530893 EIF3HO15372 352 aaKnown RBP eCLIP18.56■□□□□ 0.56
BRCA2-204ENST00000530893 DGAT1O75907 488 aa18.56■□□□□ 0.56
BRCA2-204ENST00000530893 BAG6P46379 1132 aa18.56■□□□□ 0.56
BRCA2-204ENST00000530893 DHX34Q14147 1143 aaKnown RBP18.56■□□□□ 0.56
BRCA2-204ENST00000530893 ILDR2Q71H61 639 aa18.56■□□□□ 0.56
BRCA2-204ENST00000530893 SRLQ86TD4 932 aa18.56■□□□□ 0.56
BRCA2-204ENST00000530893 CBWD2Q8IUF1 395 aa18.56■□□□□ 0.56
BRCA2-204ENST00000530893 ZNF280CQ8ND82 737 aa18.56■□□□□ 0.56
BRCA2-204ENST00000530893 REPS2Q8NFH8 660 aa18.56■□□□□ 0.56
BRCA2-204ENST00000530893 HACL1Q9UJ83 578 aa18.56■□□□□ 0.56
BRCA2-204ENST00000530893 SCAF8Q9UPN6 1271 aaKnown RBP18.56■□□□□ 0.56
BRCA2-204ENST00000530893 ARID2Q68CP9 1835 aa18.55■□□□□ 0.56
BRCA2-204ENST00000530893 ANKRD63C9JTQ0 380 aa18.55■□□□□ 0.56
BRCA2-204ENST00000530893 ATP2A1O14983 1001 aa18.55■□□□□ 0.56
BRCA2-204ENST00000530893 GGPS1O95749 300 aa18.55■□□□□ 0.56
BRCA2-204ENST00000530893 EGFRP00533 1210 aa18.55■□□□□ 0.56
BRCA2-204ENST00000530893 PSAPP07602 524 aa18.55■□□□□ 0.56
BRCA2-204ENST00000530893 SCP2P22307 547 aa18.55■□□□□ 0.56
BRCA2-204ENST00000530893 HSD17B3P37058 310 aa18.55■□□□□ 0.56
BRCA2-204ENST00000530893 BRDTQ58F21 947 aaPredicted RBP18.55■□□□□ 0.56
BRCA2-204ENST00000530893 PPM1KQ8N3J5 372 aa18.55■□□□□ 0.56
BRCA2-204ENST00000530893 FBXL13Q8NEE6 735 aa18.55■□□□□ 0.56
BRCA2-204ENST00000530893 CEP170P1Q96L14 293 aa18.55■□□□□ 0.56
BRCA2-204ENST00000530893 ATP6V1G3Q96LB4 118 aa18.55■□□□□ 0.56
BRCA2-204ENST00000530893 PLAAQ9Y263 795 aa18.55■□□□□ 0.56
BRCA2-204ENST00000530893 RIPK3Q9Y572 518 aa18.55■□□□□ 0.56
BRCA2-204ENST00000530893 PHIPQ8WWQ0 1821 aa18.55■□□□□ 0.56
BRCA2-204ENST00000530893 RLFQ13129 1914 aa18.55■□□□□ 0.56
BRCA2-204ENST00000530893 FAM187AA6NFU0 413 aa18.54■□□□□ 0.56
BRCA2-204ENST00000530893 C19orf81C9J6K1 198 aa18.54■□□□□ 0.56
BRCA2-204ENST00000530893 TTI1O43156 1089 aa18.54■□□□□ 0.56
BRCA2-204ENST00000530893 KCNA2P16389 499 aa18.54■□□□□ 0.56
BRCA2-204ENST00000530893 GARTP22102 1010 aa18.54■□□□□ 0.56
BRCA2-204ENST00000530893 MAP2K1Q02750 393 aaPredicted RBP18.54■□□□□ 0.56
BRCA2-204ENST00000530893 ENOSF1Q7L5Y1 443 aa18.54■□□□□ 0.56
BRCA2-204ENST00000530893 EFCAB13Q8IY85 973 aa18.54■□□□□ 0.56
BRCA2-204ENST00000530893 ZSWIM2Q8NEG5 633 aa18.54■□□□□ 0.56
BRCA2-204ENST00000530893 KREMEN1Q96MU8 473 aa18.54■□□□□ 0.56
BRCA2-204ENST00000530893 NT5C1BQ96P26 610 aa18.54■□□□□ 0.56
BRCA2-204ENST00000530893 WNT8AQ9H1J5 351 aa18.54■□□□□ 0.56
BRCA2-204ENST00000530893 PICK1Q9NRD5 415 aa18.54■□□□□ 0.56
BRCA2-204ENST00000530893 GABBR1Q9UBS5 961 aa18.54■□□□□ 0.56
BRCA2-204ENST00000530893 COL11A1P12107 1806 aaPredicted RBP18.54■□□□□ 0.56
BRCA2-204ENST00000530893 GOLGA8IPA6NC78 632 aa18.54■□□□□ 0.56
BRCA2-204ENST00000530893 GOLGA8JA6NMD2 632 aa18.54■□□□□ 0.56
BRCA2-204ENST00000530893 ZC3H11AO75152 810 aaKnown RBP eCLIP18.54■□□□□ 0.56
BRCA2-204ENST00000530893 SGPL1O95470 568 aa18.54■□□□□ 0.56
BRCA2-204ENST00000530893 CHRNB2P17787 502 aa18.54■□□□□ 0.56
BRCA2-204ENST00000530893 DSG3P32926 999 aa18.54■□□□□ 0.56
BRCA2-204ENST00000530893 USP8P40818 1118 aa18.54■□□□□ 0.56
BRCA2-204ENST00000530893 PRPF4BQ13523 1007 aaKnown RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms