RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 ERMNQ8TAM6 284 aa23.2■■□□□ 1.3
SMPD1-204ENST00000530395 EMILIN2Q9BXX0 1053 aa23.2■■□□□ 1.3
SMPD1-204ENST00000530395 EIF2AQ9BY44 585 aaKnown RBP23.2■■□□□ 1.3
SMPD1-204ENST00000530395 TSHZ2Q9NRE2 1034 aa23.2■■□□□ 1.3
SMPD1-204ENST00000530395 AFF1P51825 1210 aaKnown RBP23.19■■□□□ 1.3
SMPD1-204ENST00000530395 HMGN5P82970 282 aaKnown RBP23.19■■□□□ 1.3
SMPD1-204ENST00000530395 GNL2Q13823 731 aaKnown RBP23.19■■□□□ 1.3
SMPD1-204ENST00000530395 PTPN21Q16825 1174 aa23.19■■□□□ 1.3
SMPD1-204ENST00000530395 RARS2Q5T160 578 aaKnown RBP23.19■■□□□ 1.3
SMPD1-204ENST00000530395 BMP8AQ7Z5Y6 402 aa23.19■■□□□ 1.3
SMPD1-204ENST00000530395 ZBTB33Q86T24 672 aa23.19■■□□□ 1.3
SMPD1-204ENST00000530395 ZSCAN31Q96LW9 406 aaPredicted RBP23.19■■□□□ 1.3
SMPD1-204ENST00000530395 NACC1Q96RE7 527 aa23.19■■□□□ 1.3
SMPD1-204ENST00000530395 VN1R3Q9BXE9 311 aa23.19■■□□□ 1.3
SMPD1-204ENST00000530395 FOXP1Q9H334 677 aaPredicted RBP23.19■■□□□ 1.3
SMPD1-204ENST00000530395 PIEZO1Q92508 2521 aa23.19■■□□□ 1.3
SMPD1-204ENST00000530395 ARL5CA6NH57 179 aa23.18■■□□□ 1.3
SMPD1-204ENST00000530395 SPDYE4A6NLX3 237 aa23.18■■□□□ 1.3
SMPD1-204ENST00000530395 NRP1O14786 923 aa23.18■■□□□ 1.3
SMPD1-204ENST00000530395 INPPL1O15357 1258 aa23.18■■□□□ 1.3
SMPD1-204ENST00000530395 NR1I2O75469 434 aa23.18■■□□□ 1.3
SMPD1-204ENST00000530395 SSBP05455 408 aaKnown RBP eCLIP23.18■■□□□ 1.3
SMPD1-204ENST00000530395 OR52Z1P0C646 297 aa23.18■■□□□ 1.3
SMPD1-204ENST00000530395 SPATA31C1P0DKV0 1188 aa23.18■■□□□ 1.3
SMPD1-204ENST00000530395 EPCAMP16422 314 aa23.18■■□□□ 1.3
SMPD1-204ENST00000530395 ARF4P18085 180 aaPredicted RBP23.18■■□□□ 1.3
SMPD1-204ENST00000530395 SP100P23497 879 aaPredicted RBP23.18■■□□□ 1.3
SMPD1-204ENST00000530395 MLH1P40692 756 aa23.18■■□□□ 1.3
SMPD1-204ENST00000530395 SIGLEC14Q08ET2 396 aa23.18■■□□□ 1.3
SMPD1-204ENST00000530395 AMHR2Q16671 573 aa23.18■■□□□ 1.3
SMPD1-204ENST00000530395 CABP7Q86V35 215 aa23.18■■□□□ 1.3
SMPD1-204ENST00000530395 CATSPER3Q86XQ3 398 aa23.18■■□□□ 1.3
SMPD1-204ENST00000530395 FAM184AQ8NB25 1140 aa23.18■■□□□ 1.3
SMPD1-204ENST00000530395 PBXIP1Q96AQ6 731 aa23.18■■□□□ 1.3
SMPD1-204ENST00000530395 GAD1Q99259 594 aa23.18■■□□□ 1.3
SMPD1-204ENST00000530395 POLR3CQ9BUI4 534 aaPredicted RBP23.18■■□□□ 1.3
SMPD1-204ENST00000530395 APOL6Q9BWW8 343 aa23.18■■□□□ 1.3
SMPD1-204ENST00000530395 POMKQ9H5K3 350 aa23.18■■□□□ 1.3
SMPD1-204ENST00000530395 MRPL17Q9NRX2 175 aaKnown RBP23.18■■□□□ 1.3
SMPD1-204ENST00000530395 DBR1Q9UK59 544 aaKnown RBP23.18■■□□□ 1.3
SMPD1-204ENST00000530395 A0A087WWV3 80 aa23.17■■□□□ 1.3
SMPD1-204ENST00000530395 LRRIQ4A6NIV6 560 aa23.17■■□□□ 1.3
SMPD1-204ENST00000530395 URODP06132 367 aa23.17■■□□□ 1.3
SMPD1-204ENST00000530395 HOXD11P31277 338 aaPredicted RBP23.17■■□□□ 1.3
SMPD1-204ENST00000530395 OR1G1P47890 313 aa23.17■■□□□ 1.3
SMPD1-204ENST00000530395 RBM25P49756 843 aaKnown RBP23.17■■□□□ 1.3
SMPD1-204ENST00000530395 ATAT1Q5SQI0 421 aa23.17■■□□□ 1.3
SMPD1-204ENST00000530395 KIAA1841Q6NSI8 718 aa23.17■■□□□ 1.3
SMPD1-204ENST00000530395 SLC27A1Q6PCB7 646 aa23.17■■□□□ 1.3
SMPD1-204ENST00000530395 SUGP1Q8IWZ8 645 aaKnown RBP23.17■■□□□ 1.3
SMPD1-204ENST00000530395 SLC22A17Q8WUG5 538 aa23.17■■□□□ 1.3
SMPD1-204ENST00000530395 RNF39Q9H2S5 420 aa23.17■■□□□ 1.3
SMPD1-204ENST00000530395 SH2B1Q9NRF2 756 aaPredicted RBP23.17■■□□□ 1.3
SMPD1-204ENST00000530395 CDH22Q9UJ99 828 aa23.17■■□□□ 1.3
SMPD1-204ENST00000530395 SSX2IPQ9Y2D8 614 aa23.17■■□□□ 1.3
SMPD1-204ENST00000530395 GIT1Q9Y2X7 761 aa23.17■■□□□ 1.3
SMPD1-204ENST00000530395 PRG3Q9Y2Y8 225 aaPredicted RBP23.17■■□□□ 1.3
SMPD1-204ENST00000530395 HES2Q9Y543 173 aa23.17■■□□□ 1.3
SMPD1-204ENST00000530395 MED24O75448 989 aa23.16■■□□□ 1.3
SMPD1-204ENST00000530395 SOD2P04179 222 aa23.16■■□□□ 1.3
SMPD1-204ENST00000530395 KLRC2P26717 231 aa23.16■■□□□ 1.3
SMPD1-204ENST00000530395 SCNN1GP51170 649 aa23.16■■□□□ 1.3
SMPD1-204ENST00000530395 ZNF174Q15697 407 aa23.16■■□□□ 1.3
SMPD1-204ENST00000530395 MAEAQ7L5Y9 396 aa23.16■■□□□ 1.3
SMPD1-204ENST00000530395 ZBTB8OSQ8IWT0 167 aa23.16■■□□□ 1.3
SMPD1-204ENST00000530395 COLGALT2Q8IYK4 626 aa23.16■■□□□ 1.3
SMPD1-204ENST00000530395 C12orf76Q8N812 135 aaPredicted RBP23.16■■□□□ 1.3
SMPD1-204ENST00000530395 FBXO18Q8NFZ0 1043 aa23.16■■□□□ 1.3
SMPD1-204ENST00000530395 PRIMPOLQ96LW4 560 aa23.16■■□□□ 1.3
SMPD1-204ENST00000530395 HERC2P3Q9BVR0 1158 aa23.16■■□□□ 1.3
SMPD1-204ENST00000530395 NXF3Q9H4D5 531 aaKnown RBP23.16■■□□□ 1.3
SMPD1-204ENST00000530395 SFXN1Q9H9B4 322 aa23.16■■□□□ 1.3
SMPD1-204ENST00000530395 PRMT7Q9NVM4 692 aaPredicted RBP23.16■■□□□ 1.3
SMPD1-204ENST00000530395 NOL7Q9UMY1 257 aaKnown RBP23.16■■□□□ 1.3
SMPD1-204ENST00000530395 DENND4AQ7Z401 1863 aa23.15■■□□□ 1.3
SMPD1-204ENST00000530395 ZMYM2Q9UBW7 1377 aa23.15■■□□□ 1.3
SMPD1-204ENST00000530395 B4GALT5O43286 388 aa23.15■■□□□ 1.3
SMPD1-204ENST00000530395 TTC38Q5R3I4 469 aa23.15■■□□□ 1.3
SMPD1-204ENST00000530395 HAUS3Q68CZ6 603 aa23.15■■□□□ 1.3
SMPD1-204ENST00000530395 NOSTRINQ8IVI9 506 aa23.15■■□□□ 1.3
SMPD1-204ENST00000530395 FBXL18Q96ME1 805 aa23.15■■□□□ 1.3
SMPD1-204ENST00000530395 ZFP42Q96MM3 310 aa23.15■■□□□ 1.3
SMPD1-204ENST00000530395 KLHL5Q96PQ7 755 aa23.15■■□□□ 1.3
SMPD1-204ENST00000530395 C2orf40Q9H1Z8 148 aa23.15■■□□□ 1.3
SMPD1-204ENST00000530395 GPRC5CQ9NQ84 441 aa23.15■■□□□ 1.3
SMPD1-204ENST00000530395 MARCH5Q9NX47 278 aa23.15■■□□□ 1.3
SMPD1-204ENST00000530395 ZDBF2Q9HCK1 2354 aa23.14■■□□□ 1.3
SMPD1-204ENST00000530395 A0A1B0GUA9 196 aa23.14■■□□□ 1.29
SMPD1-204ENST00000530395 ARHGEF35A5YM69 484 aa23.14■■□□□ 1.29
SMPD1-204ENST00000530395 NPTXRO95502 500 aa23.14■■□□□ 1.29
SMPD1-204ENST00000530395 CENPBP07199 599 aaPredicted RBP23.14■■□□□ 1.29
SMPD1-204ENST00000530395 CNPP09543 421 aaKnown RBP23.14■■□□□ 1.29
SMPD1-204ENST00000530395 WEE2P0C1S8 567 aa23.14■■□□□ 1.29
SMPD1-204ENST00000530395 RPA1P27694 616 aa23.14■■□□□ 1.29
SMPD1-204ENST00000530395 TRAPPC10P48553 1259 aa23.14■■□□□ 1.29
SMPD1-204ENST00000530395 DSC1Q08554 894 aa23.14■■□□□ 1.29
SMPD1-204ENST00000530395 POTEGQ6S5H5 508 aa23.14■■□□□ 1.29
SMPD1-204ENST00000530395 PPP4R3CPQ6ZMV5 832 aa23.14■■□□□ 1.29
SMPD1-204ENST00000530395 TDRD5Q8NAT2 981 aaKnown RBP23.14■■□□□ 1.29
SMPD1-204ENST00000530395 C2CD4DB7Z1M9 353 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms