RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 BICD1Q96G01 975 aa13.32□□□□□ -0.28
TRAF3IP2-211ENST00000528599 CPB2Q96IY4 423 aa13.32□□□□□ -0.28
TRAF3IP2-211ENST00000528599 ZBTB45Q96K62 511 aaPredicted RBP13.32□□□□□ -0.28
TRAF3IP2-211ENST00000528599 MRPL4Q9BYD3 311 aaKnown RBP13.32□□□□□ -0.28
TRAF3IP2-211ENST00000528599 GBP3Q9H0R5 595 aa13.32□□□□□ -0.28
TRAF3IP2-211ENST00000528599 PRO3102Q9H379 93 aa13.32□□□□□ -0.28
TRAF3IP2-211ENST00000528599 ERVK-5Q9HDB9 667 aa13.32□□□□□ -0.28
TRAF3IP2-211ENST00000528599 TYW1Q9NV66 732 aaKnown RBP13.32□□□□□ -0.28
TRAF3IP2-211ENST00000528599 DACH1Q9UI36 760 aa13.32□□□□□ -0.28
TRAF3IP2-211ENST00000528599 PADI3Q9ULW8 664 aa13.32□□□□□ -0.28
TRAF3IP2-211ENST00000528599 ST3GAL5Q9UNP4 418 aa13.32□□□□□ -0.28
TRAF3IP2-211ENST00000528599 SQORQ9Y6N5 450 aa13.32□□□□□ -0.28
TRAF3IP2-211ENST00000528599 PDXKO00764 312 aa13.31□□□□□ -0.28
TRAF3IP2-211ENST00000528599 ABLIM1O14639 778 aa13.31□□□□□ -0.28
TRAF3IP2-211ENST00000528599 TIMP1P01033 207 aa13.31□□□□□ -0.28
TRAF3IP2-211ENST00000528599 ERCC5P28715 1186 aaPredicted RBP13.31□□□□□ -0.28
TRAF3IP2-211ENST00000528599 ADSSP30520 456 aa13.31□□□□□ -0.28
TRAF3IP2-211ENST00000528599 LIG4P49917 911 aa13.31□□□□□ -0.28
TRAF3IP2-211ENST00000528599 NFX1Q12986 1120 aaKnown RBP13.31□□□□□ -0.28
TRAF3IP2-211ENST00000528599 PCBP1Q15365 356 aaKnown RBP eCLIP13.31□□□□□ -0.28
TRAF3IP2-211ENST00000528599 CT47A1Q5JQC4 288 aaPredicted RBP13.31□□□□□ -0.28
TRAF3IP2-211ENST00000528599 ATF7IP2Q5U623 682 aa13.31□□□□□ -0.28
TRAF3IP2-211ENST00000528599 EEF1DP3Q658K8 133 aa13.31□□□□□ -0.28
TRAF3IP2-211ENST00000528599 TTI2Q6NXR4 508 aa13.31□□□□□ -0.28
TRAF3IP2-211ENST00000528599 ZPBP2Q6X784 338 aa13.31□□□□□ -0.28
TRAF3IP2-211ENST00000528599 USP38Q8NB14 1042 aa13.31□□□□□ -0.28
TRAF3IP2-211ENST00000528599 DUSP9Q99956 384 aaKnown RBP13.31□□□□□ -0.28
TRAF3IP2-211ENST00000528599 GDF15Q99988 308 aa13.31□□□□□ -0.28
TRAF3IP2-211ENST00000528599 HAPLN2Q9GZV7 340 aa13.31□□□□□ -0.28
TRAF3IP2-211ENST00000528599 TSPY26PQ9H489 355 aa13.31□□□□□ -0.28
TRAF3IP2-211ENST00000528599 PTPRHQ9HD43 1115 aa13.31□□□□□ -0.28
TRAF3IP2-211ENST00000528599 AGPAT3Q9NRZ7 376 aa13.31□□□□□ -0.28
TRAF3IP2-211ENST00000528599 AGPAT5Q9NUQ2 364 aa13.31□□□□□ -0.28
TRAF3IP2-211ENST00000528599 RWDD2AQ9UIY3 292 aa13.31□□□□□ -0.28
TRAF3IP2-211ENST00000528599 TRAF3IP3Q9Y228 551 aa13.31□□□□□ -0.28
TRAF3IP2-211ENST00000528599 TANC1Q9C0D5 1861 aa13.31□□□□□ -0.28
TRAF3IP2-211ENST00000528599 A0A1B0GUA9 196 aa13.31□□□□□ -0.28
TRAF3IP2-211ENST00000528599 GPR182O15218 404 aa13.31□□□□□ -0.28
TRAF3IP2-211ENST00000528599 CLIC2O15247 247 aa13.31□□□□□ -0.28
TRAF3IP2-211ENST00000528599 RAG1P15918 1043 aa13.31□□□□□ -0.28
TRAF3IP2-211ENST00000528599 PAK2Q13177 524 aa13.31□□□□□ -0.28
TRAF3IP2-211ENST00000528599 HS2ST1Q7LGA3 356 aa13.31□□□□□ -0.28
TRAF3IP2-211ENST00000528599 BADQ92934 168 aa13.31□□□□□ -0.28
TRAF3IP2-211ENST00000528599 VWCEQ96DN2 955 aa13.31□□□□□ -0.28
TRAF3IP2-211ENST00000528599 TMX1Q9H3N1 280 aa13.31□□□□□ -0.28
TRAF3IP2-211ENST00000528599 PDZD7Q9H5P4 517 aa13.31□□□□□ -0.28
TRAF3IP2-211ENST00000528599 TNFSF13BQ9Y275 285 aa13.31□□□□□ -0.28
TRAF3IP2-211ENST00000528599 STYXL1Q9Y6J8 313 aa13.31□□□□□ -0.28
TRAF3IP2-211ENST00000528599 TRIOBPQ9H2D6 2365 aa13.3□□□□□ -0.28
TRAF3IP2-211ENST00000528599 SCN5AQ14524 2016 aa13.3□□□□□ -0.28
TRAF3IP2-211ENST00000528599 TOM1L1O75674 476 aa13.3□□□□□ -0.28
TRAF3IP2-211ENST00000528599 PROZP22891 400 aa13.3□□□□□ -0.28
TRAF3IP2-211ENST00000528599 ZNF165P49910 485 aa13.3□□□□□ -0.28
TRAF3IP2-211ENST00000528599 LRRC63Q05C16 580 aa13.3□□□□□ -0.28
TRAF3IP2-211ENST00000528599 TMEM132AQ24JP5 1023 aa13.3□□□□□ -0.28
TRAF3IP2-211ENST00000528599 CHRDL2Q6WN34 429 aa13.3□□□□□ -0.28
TRAF3IP2-211ENST00000528599 CBWD1Q9BRT8 395 aa13.3□□□□□ -0.28
TRAF3IP2-211ENST00000528599 ANKFY1Q9P2R3 1169 aa13.3□□□□□ -0.28
TRAF3IP2-211ENST00000528599 PIN4Q9Y237 131 aaKnown RBP13.3□□□□□ -0.28
TRAF3IP2-211ENST00000528599 BICDL2A1A5D9 508 aa13.29□□□□□ -0.28
TRAF3IP2-211ENST00000528599 CALUO43852 315 aaPredicted RBP13.29□□□□□ -0.28
TRAF3IP2-211ENST00000528599 MGEA5O60502 916 aa13.29□□□□□ -0.28
TRAF3IP2-211ENST00000528599 CXCL10P02778 98 aa13.29□□□□□ -0.28
TRAF3IP2-211ENST00000528599 NR3C1P04150 777 aa13.29□□□□□ -0.28
TRAF3IP2-211ENST00000528599 AXLP30530 894 aa13.29□□□□□ -0.28
TRAF3IP2-211ENST00000528599 EPHB4P54760 987 aa13.29□□□□□ -0.28
TRAF3IP2-211ENST00000528599 SNRPFP62306 86 aaKnown RBP13.29□□□□□ -0.28
TRAF3IP2-211ENST00000528599 NCBP1Q09161 790 aaKnown RBP13.29□□□□□ -0.28
TRAF3IP2-211ENST00000528599 DSC3Q14574 896 aa13.29□□□□□ -0.28
TRAF3IP2-211ENST00000528599 IQCB1Q15051 598 aa13.29□□□□□ -0.28
TRAF3IP2-211ENST00000528599 TCTN1Q2MV58 587 aa13.29□□□□□ -0.28
TRAF3IP2-211ENST00000528599 EDRF1Q3B7T1 1238 aa13.29□□□□□ -0.28
TRAF3IP2-211ENST00000528599 PLEKHG4Q58EX7 1191 aa13.29□□□□□ -0.28
TRAF3IP2-211ENST00000528599 MFSD5Q6N075 450 aa13.29□□□□□ -0.28
TRAF3IP2-211ENST00000528599 FOXR2Q6PJQ5 311 aa13.29□□□□□ -0.28
TRAF3IP2-211ENST00000528599 ZBTB33Q86T24 672 aa13.29□□□□□ -0.28
TRAF3IP2-211ENST00000528599 C12orf56Q8IXR9 622 aa13.29□□□□□ -0.28
TRAF3IP2-211ENST00000528599 ZSWIM2Q8NEG5 633 aa13.29□□□□□ -0.28
TRAF3IP2-211ENST00000528599 DBF4BQ8NFT6 615 aa13.29□□□□□ -0.28
TRAF3IP2-211ENST00000528599 GOLGA5Q8TBA6 731 aa13.29□□□□□ -0.28
TRAF3IP2-211ENST00000528599 EEF2KMTQ96G04 330 aa13.29□□□□□ -0.28
TRAF3IP2-211ENST00000528599 TSG101Q99816 390 aa13.29□□□□□ -0.28
TRAF3IP2-211ENST00000528599 BPIFA3Q9BQP9 254 aa13.29□□□□□ -0.28
TRAF3IP2-211ENST00000528599 TCHPQ9BT92 498 aa13.29□□□□□ -0.28
TRAF3IP2-211ENST00000528599 IFIH1Q9BYX4 1025 aaKnown RBP13.29□□□□□ -0.28
TRAF3IP2-211ENST00000528599 NAT10Q9H0A0 1025 aaKnown RBP13.29□□□□□ -0.28
TRAF3IP2-211ENST00000528599 PCIF1Q9H4Z3 704 aa13.29□□□□□ -0.28
TRAF3IP2-211ENST00000528599 CBX8Q9HC52 389 aa13.29□□□□□ -0.28
TRAF3IP2-211ENST00000528599 DMAC2Q9NW81 257 aa13.29□□□□□ -0.28
TRAF3IP2-211ENST00000528599 CGNQ9P2M7 1197 aaKnown RBP13.29□□□□□ -0.28
TRAF3IP2-211ENST00000528599 COLQQ9Y215 455 aaPredicted RBP13.29□□□□□ -0.28
TRAF3IP2-211ENST00000528599 A0A0B4J269 797 aa13.28□□□□□ -0.28
TRAF3IP2-211ENST00000528599 N4BP3O15049 544 aa13.28□□□□□ -0.28
TRAF3IP2-211ENST00000528599 CLDN3O15551 220 aa13.28□□□□□ -0.28
TRAF3IP2-211ENST00000528599 PARNO95453 639 aaKnown RBP13.28□□□□□ -0.28
TRAF3IP2-211ENST00000528599 CSF2RAP15509 400 aa13.28□□□□□ -0.28
TRAF3IP2-211ENST00000528599 CYP2J2P51589 502 aa13.28□□□□□ -0.28
TRAF3IP2-211ENST00000528599 MCL1Q07820 350 aa13.28□□□□□ -0.28
TRAF3IP2-211ENST00000528599 NCAPHQ15003 741 aa13.28□□□□□ -0.28
TRAF3IP2-211ENST00000528599 NFIL3Q16649 462 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms