RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 BECN1Q14457 450 aa18.55■□□□□ 0.56
HIF3A-211ENST00000528563 NT5DC1Q5TFE4 455 aa18.55■□□□□ 0.56
HIF3A-211ENST00000528563 TAS1R3Q7RTX0 852 aa18.55■□□□□ 0.56
HIF3A-211ENST00000528563 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.55■□□□□ 0.56
HIF3A-211ENST00000528563 LARP4BQ92615 738 aaKnown RBP18.55■□□□□ 0.56
HIF3A-211ENST00000528563 PDZD7Q9H5P4 517 aa18.55■□□□□ 0.56
HIF3A-211ENST00000528563 KMT5AQ9NQR1 393 aa18.55■□□□□ 0.56
HIF3A-211ENST00000528563 TBC1D13Q9NVG8 400 aa18.55■□□□□ 0.56
HIF3A-211ENST00000528563 STK17AQ9UEE5 414 aa18.55■□□□□ 0.56
HIF3A-211ENST00000528563 DAXXQ9UER7 740 aaPredicted RBP18.55■□□□□ 0.56
HIF3A-211ENST00000528563 ODF2LQ9ULJ1 636 aa18.55■□□□□ 0.56
HIF3A-211ENST00000528563 REV3LO60673 3130 aa18.55■□□□□ 0.56
HIF3A-211ENST00000528563 FGF18O76093 207 aa18.54■□□□□ 0.56
HIF3A-211ENST00000528563 NPTXRO95502 500 aa18.54■□□□□ 0.56
HIF3A-211ENST00000528563 LIG1P18858 919 aa18.54■□□□□ 0.56
HIF3A-211ENST00000528563 TXLNAP40222 546 aa18.54■□□□□ 0.56
HIF3A-211ENST00000528563 GIT2Q14161 759 aa18.54■□□□□ 0.56
HIF3A-211ENST00000528563 AXDND1Q5T1B0 1012 aaPredicted RBP18.54■□□□□ 0.56
HIF3A-211ENST00000528563 RRAGBQ5VZM2 374 aa18.54■□□□□ 0.56
HIF3A-211ENST00000528563 TMEM161BQ8NDZ6 487 aa18.54■□□□□ 0.56
HIF3A-211ENST00000528563 ZNF558Q96NG5 402 aa18.54■□□□□ 0.56
HIF3A-211ENST00000528563 REEP2Q9BRK0 252 aa18.54■□□□□ 0.56
HIF3A-211ENST00000528563 PANK2Q9BZ23 570 aa18.54■□□□□ 0.56
HIF3A-211ENST00000528563 KANSL3Q9P2N6 904 aa18.54■□□□□ 0.56
HIF3A-211ENST00000528563 RCOR1Q9UKL0 485 aa18.54■□□□□ 0.56
HIF3A-211ENST00000528563 INPP5FQ9Y2H2 1132 aa18.54■□□□□ 0.56
HIF3A-211ENST00000528563 MYH15Q9Y2K3 1946 aa18.54■□□□□ 0.56
HIF3A-211ENST00000528563 N4BP3O15049 544 aa18.53■□□□□ 0.56
HIF3A-211ENST00000528563 SLC16A4O15374 487 aa18.53■□□□□ 0.56
HIF3A-211ENST00000528563 CUTAO60888 179 aa18.53■□□□□ 0.56
HIF3A-211ENST00000528563 ZNF131P52739 623 aa18.53■□□□□ 0.56
HIF3A-211ENST00000528563 SMTNP53814 917 aa18.53■□□□□ 0.56
HIF3A-211ENST00000528563 PLCB3Q01970 1234 aa18.53■□□□□ 0.56
HIF3A-211ENST00000528563 CACNB1Q02641 598 aaPredicted RBP18.53■□□□□ 0.56
HIF3A-211ENST00000528563 UBE3AQ05086 875 aa18.53■□□□□ 0.56
HIF3A-211ENST00000528563 DNM1Q05193 864 aaKnown RBP18.53■□□□□ 0.56
HIF3A-211ENST00000528563 EEF1DP3Q658K8 133 aa18.53■□□□□ 0.56
HIF3A-211ENST00000528563 THNSL1Q8IYQ7 743 aa18.53■□□□□ 0.56
HIF3A-211ENST00000528563 POF1BQ8WVV4 589 aa18.53■□□□□ 0.56
HIF3A-211ENST00000528563 TRIM6Q9C030 488 aaPredicted RBP18.53■□□□□ 0.56
HIF3A-211ENST00000528563 NXF3Q9H4D5 531 aaKnown RBP18.53■□□□□ 0.56
HIF3A-211ENST00000528563 NRDE2Q9H7Z3 1164 aa18.53■□□□□ 0.56
HIF3A-211ENST00000528563 LARSQ9P2J5 1176 aaKnown RBP18.53■□□□□ 0.56
HIF3A-211ENST00000528563 CFAP45Q9UL16 551 aa18.53■□□□□ 0.56
HIF3A-211ENST00000528563 GIT1Q9Y2X7 761 aa18.53■□□□□ 0.56
HIF3A-211ENST00000528563 A0A087X0B3 334 aa18.52■□□□□ 0.56
HIF3A-211ENST00000528563 ARL5CA6NH57 179 aa18.52■□□□□ 0.56
HIF3A-211ENST00000528563 PBX3P40426 434 aa18.52■□□□□ 0.56
HIF3A-211ENST00000528563 ALDH7A1P49419 539 aaKnown RBP18.52■□□□□ 0.56
HIF3A-211ENST00000528563 BCAR1P56945 870 aa18.52■□□□□ 0.56
HIF3A-211ENST00000528563 TIGD5Q53EQ6 642 aa18.52■□□□□ 0.56
HIF3A-211ENST00000528563 ATF7IP2Q5U623 682 aa18.52■□□□□ 0.56
HIF3A-211ENST00000528563 CCDC73Q6ZRK6 1079 aa18.52■□□□□ 0.56
HIF3A-211ENST00000528563 ZNF280BQ86YH2 543 aa18.52■□□□□ 0.56
HIF3A-211ENST00000528563 URGCPQ8TCY9 931 aa18.52■□□□□ 0.56
HIF3A-211ENST00000528563 KCNG4Q8TDN1 519 aa18.52■□□□□ 0.56
HIF3A-211ENST00000528563 KCNN1Q92952 543 aa18.52■□□□□ 0.56
HIF3A-211ENST00000528563 GAD1Q99259 594 aa18.52■□□□□ 0.56
HIF3A-211ENST00000528563 ACO2Q99798 780 aaKnown RBP18.52■□□□□ 0.56
HIF3A-211ENST00000528563 SPG21Q9NZD8 308 aa18.52■□□□□ 0.56
HIF3A-211ENST00000528563 LZTS1Q9Y250 596 aa18.52■□□□□ 0.56
HIF3A-211ENST00000528563 TNFSF13BQ9Y275 285 aa18.52■□□□□ 0.56
HIF3A-211ENST00000528563 PHLPP2Q6ZVD8 1323 aa18.52■□□□□ 0.56
HIF3A-211ENST00000528563 B4GALT3O60512 393 aa18.52■□□□□ 0.55
HIF3A-211ENST00000528563 DDHD2O94830 711 aa18.52■□□□□ 0.55
HIF3A-211ENST00000528563 MAPTP10636 758 aaKnown RBP18.52■□□□□ 0.55
HIF3A-211ENST00000528563 AKAP5P24588 427 aa18.52■□□□□ 0.55
HIF3A-211ENST00000528563 PPM1AP35813 382 aa18.52■□□□□ 0.55
HIF3A-211ENST00000528563 RNASELQ05823 741 aaKnown RBP18.52■□□□□ 0.55
HIF3A-211ENST00000528563 HACE1Q8IYU2 909 aa18.52■□□□□ 0.55
HIF3A-211ENST00000528563 SLC39A11Q8N1S5 342 aa18.52■□□□□ 0.55
HIF3A-211ENST00000528563 GSTCDQ8NEC7 633 aa18.52■□□□□ 0.55
HIF3A-211ENST00000528563 NSUN3Q9H649 340 aaKnown RBP18.52■□□□□ 0.55
HIF3A-211ENST00000528563 PTPRHQ9HD43 1115 aa18.52■□□□□ 0.55
HIF3A-211ENST00000528563 MIOSQ9NXC5 875 aa18.52■□□□□ 0.55
HIF3A-211ENST00000528563 GALTP07902 379 aa18.51■□□□□ 0.55
HIF3A-211ENST00000528563 IRS1P35568 1242 aa18.51■□□□□ 0.55
HIF3A-211ENST00000528563 NCKAP1LP55160 1127 aa18.51■□□□□ 0.55
HIF3A-211ENST00000528563 SKIV2LQ15477 1246 aaKnown RBP18.51■□□□□ 0.55
HIF3A-211ENST00000528563 TMEM132AQ24JP5 1023 aa18.51■□□□□ 0.55
HIF3A-211ENST00000528563 TCEAL5Q5H9L2 206 aa18.51■□□□□ 0.55
HIF3A-211ENST00000528563 SHC4Q6S5L8 630 aa18.51■□□□□ 0.55
HIF3A-211ENST00000528563 SV2BQ7L1I2 683 aa18.51■□□□□ 0.55
HIF3A-211ENST00000528563 MRPS27Q92552 414 aaKnown RBP18.51■□□□□ 0.55
HIF3A-211ENST00000528563 ZFP42Q96MM3 310 aa18.51■□□□□ 0.55
HIF3A-211ENST00000528563 ADPGKQ9BRR6 497 aa18.51■□□□□ 0.55
HIF3A-211ENST00000528563 TARS2Q9BW92 718 aaKnown RBP18.51■□□□□ 0.55
HIF3A-211ENST00000528563 APOL6Q9BWW8 343 aa18.51■□□□□ 0.55
HIF3A-211ENST00000528563 MRPL4Q9BYD3 311 aaKnown RBP18.51■□□□□ 0.55
HIF3A-211ENST00000528563 DNAJB4Q9UDY4 337 aa18.51■□□□□ 0.55
HIF3A-211ENST00000528563 PCDHA7Q9UN72 937 aa18.51■□□□□ 0.55
HIF3A-211ENST00000528563 MYH11P35749 1972 aa18.5■□□□□ 0.55
HIF3A-211ENST00000528563 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.5■□□□□ 0.55
HIF3A-211ENST00000528563 CARNS1A5YM72 827 aa18.5■□□□□ 0.55
HIF3A-211ENST00000528563 MYMKA6NI61 221 aa18.5■□□□□ 0.55
HIF3A-211ENST00000528563 NT5C1B-RDH14C9J2C7 533 aa18.5■□□□□ 0.55
HIF3A-211ENST00000528563 ZC3H11AO75152 810 aaKnown RBP eCLIP18.5■□□□□ 0.55
HIF3A-211ENST00000528563 FAM13AO94988 1023 aa18.5■□□□□ 0.55
HIF3A-211ENST00000528563 POMCP01189 267 aa18.5■□□□□ 0.55
HIF3A-211ENST00000528563 KRT18P05783 430 aaKnown RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms