RNA–Protein interactions for RNA: ENST00000528339.5

SORL1-207, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 3,703 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-207ENST00000528339 RARBP10826 455 aa8.62□□□□□ -1.03
SORL1-207ENST00000528339 FKBP3Q00688 224 aaKnown RBP8.62□□□□□ -1.03
SORL1-207ENST00000528339 XKR9Q5GH70 373 aa8.62□□□□□ -1.03
SORL1-207ENST00000528339 EFCAB12Q6NXP0 572 aa8.62□□□□□ -1.03
SORL1-207ENST00000528339 FAM228AQ86W67 206 aa8.62□□□□□ -1.03
SORL1-207ENST00000528339 DRC7Q8IY82 874 aa8.62□□□□□ -1.03
SORL1-207ENST00000528339 IMPACTQ9P2X3 320 aa8.62□□□□□ -1.03
SORL1-207ENST00000528339 NFE2L3Q9Y4A8 694 aa8.62□□□□□ -1.03
SORL1-207ENST00000528339 SMTNL1A8MU46 457 aa8.61□□□□□ -1.03
SORL1-207ENST00000528339 TISP43B9A030 160 aa8.61□□□□□ -1.03
SORL1-207ENST00000528339 KIAA0355O15063 1070 aa8.61□□□□□ -1.03
SORL1-207ENST00000528339 MCF2P10911 925 aa8.61□□□□□ -1.03
SORL1-207ENST00000528339 KCNE1P15382 129 aa8.61□□□□□ -1.03
SORL1-207ENST00000528339 CACNB1Q02641 598 aaPredicted RBP8.61□□□□□ -1.03
SORL1-207ENST00000528339 PPP2R3AQ06190 1150 aa8.61□□□□□ -1.03
SORL1-207ENST00000528339 CYP24A1Q07973 514 aa8.61□□□□□ -1.03
SORL1-207ENST00000528339 KIF22Q14807 665 aa8.61□□□□□ -1.03
SORL1-207ENST00000528339 SCARA3Q6AZY7 606 aa8.61□□□□□ -1.03
SORL1-207ENST00000528339 SASS6Q6UVJ0 657 aa8.61□□□□□ -1.03
SORL1-207ENST00000528339 WNT8AQ9H1J5 351 aa8.61□□□□□ -1.03
SORL1-207ENST00000528339 LARSQ9P2J5 1176 aaKnown RBP8.61□□□□□ -1.03
SORL1-207ENST00000528339 AJAP1Q9UKB5 411 aaPredicted RBP8.61□□□□□ -1.03
SORL1-207ENST00000528339 MYO6Q9UM54 1294 aa8.61□□□□□ -1.03
SORL1-207ENST00000528339 A0A0U1RQG5 324 aaPredicted RBP8.61□□□□□ -1.03
SORL1-207ENST00000528339 GOLGA6L4A6NEF3 574 aa8.61□□□□□ -1.03
SORL1-207ENST00000528339 USO1O60763 962 aaKnown RBP8.61□□□□□ -1.03
SORL1-207ENST00000528339 GRM5P41594 1212 aa8.61□□□□□ -1.03
SORL1-207ENST00000528339 CASP4P49662 377 aa8.61□□□□□ -1.03
SORL1-207ENST00000528339 FAAP100Q0VG06 881 aa8.61□□□□□ -1.03
SORL1-207ENST00000528339 MTFR1Q15390 333 aa8.61□□□□□ -1.03
SORL1-207ENST00000528339 FBXO47Q5MNV8 452 aa8.61□□□□□ -1.03
SORL1-207ENST00000528339 RTN4RL1Q86UN2 441 aaPredicted RBP8.61□□□□□ -1.03
SORL1-207ENST00000528339 PARD3BQ8TEW8 1205 aa8.61□□□□□ -1.03
SORL1-207ENST00000528339 SYN2Q92777 582 aaPredicted RBP8.61□□□□□ -1.03
SORL1-207ENST00000528339 XYLT2Q9H1B5 865 aa8.61□□□□□ -1.03
SORL1-207ENST00000528339 CHST12Q9NRB3 414 aa8.61□□□□□ -1.03
SORL1-207ENST00000528339 PCDHB13Q9Y5F0 798 aa8.61□□□□□ -1.03
SORL1-207ENST00000528339 DYNC1LI2O43237 492 aaPredicted RBP8.6□□□□□ -1.03
SORL1-207ENST00000528339 EXTL3O43909 919 aa8.6□□□□□ -1.03
SORL1-207ENST00000528339 SFPQP23246 707 aaKnown RBP eCLIP8.6□□□□□ -1.03
SORL1-207ENST00000528339 CNGA1P29973 690 aa8.6□□□□□ -1.03
SORL1-207ENST00000528339 RPL34P49207 117 aaKnown RBP8.6□□□□□ -1.03
SORL1-207ENST00000528339 CTCFP49711 727 aaPredicted RBP8.6□□□□□ -1.03
SORL1-207ENST00000528339 MRPS6P82932 125 aaKnown RBP8.6□□□□□ -1.03
SORL1-207ENST00000528339 ZNF200P98182 395 aaPredicted RBP8.6□□□□□ -1.03
SORL1-207ENST00000528339 PPFIA1Q13136 1202 aa8.6□□□□□ -1.03
SORL1-207ENST00000528339 PLEKHG4Q58EX7 1191 aa8.6□□□□□ -1.03
SORL1-207ENST00000528339 BRSK2Q8IWQ3 736 aa8.6□□□□□ -1.03
SORL1-207ENST00000528339 TMEM143Q96AN5 459 aa8.6□□□□□ -1.03
SORL1-207ENST00000528339 HMX1Q9NP08 348 aaPredicted RBP8.6□□□□□ -1.03
SORL1-207ENST00000528339 PKD2L1Q9P0L9 805 aa8.6□□□□□ -1.03
SORL1-207ENST00000528339 C17orf102A2RUQ5 167 aa8.6□□□□□ -1.03
SORL1-207ENST00000528339 LRRIQ3A6PVS8 624 aaPredicted RBP8.6□□□□□ -1.03
SORL1-207ENST00000528339 TOM1L1O75674 476 aa8.6□□□□□ -1.03
SORL1-207ENST00000528339 PRPF6O94906 941 aaKnown RBP8.6□□□□□ -1.03
SORL1-207ENST00000528339 COPB1P53618 953 aaKnown RBP8.6□□□□□ -1.03
SORL1-207ENST00000528339 FANCCQ00597 558 aa8.6□□□□□ -1.03
SORL1-207ENST00000528339 LPIN1Q14693 890 aa8.6□□□□□ -1.03
SORL1-207ENST00000528339 ARHGEF6Q15052 776 aa8.6□□□□□ -1.03
SORL1-207ENST00000528339 CEP135Q66GS9 1140 aa8.6□□□□□ -1.03
SORL1-207ENST00000528339 HGSNATQ68CP4 663 aa8.6□□□□□ -1.03
SORL1-207ENST00000528339 WDR59Q6PJI9 974 aa8.6□□□□□ -1.03
SORL1-207ENST00000528339 SLC39A5Q6ZMH5 540 aa8.6□□□□□ -1.03
SORL1-207ENST00000528339 TC2NQ8N9U0 490 aa8.6□□□□□ -1.03
SORL1-207ENST00000528339 CBWD1Q9BRT8 395 aa8.6□□□□□ -1.03
SORL1-207ENST00000528339 HSPBP1Q9NZL4 362 aa8.6□□□□□ -1.03
SORL1-207ENST00000528339 SUCLA2Q9P2R7 463 aaPredicted RBP8.6□□□□□ -1.03
SORL1-207ENST00000528339 ZHX1Q9UKY1 873 aaPredicted RBP8.6□□□□□ -1.03
SORL1-207ENST00000528339 KCNJ18B7U540 433 aa8.6□□□□□ -1.03
SORL1-207ENST00000528339 MGEA5O60502 916 aa8.6□□□□□ -1.03
SORL1-207ENST00000528339 GYPCP04921 128 aa8.6□□□□□ -1.03
SORL1-207ENST00000528339 CCZ1BP86790 482 aa8.6□□□□□ -1.03
SORL1-207ENST00000528339 CCZ1P86791 482 aaPredicted RBP8.6□□□□□ -1.03
SORL1-207ENST00000528339 KCNJ12Q14500 433 aa8.6□□□□□ -1.03
SORL1-207ENST00000528339 MTERF2Q49AM1 385 aa8.6□□□□□ -1.03
SORL1-207ENST00000528339 ODR4Q5SWX8 454 aa8.6□□□□□ -1.03
SORL1-207ENST00000528339 SNX27Q96L92 541 aa8.6□□□□□ -1.03
SORL1-207ENST00000528339 NOC4LQ9BVI4 516 aaKnown RBP8.6□□□□□ -1.03
SORL1-207ENST00000528339 NAT10Q9H0A0 1025 aaKnown RBP8.6□□□□□ -1.03
SORL1-207ENST00000528339 CDT1Q9H211 546 aa8.6□□□□□ -1.03
SORL1-207ENST00000528339 CXCL16Q9H2A7 254 aa8.6□□□□□ -1.03
SORL1-207ENST00000528339 PRO3102Q9H379 93 aa8.6□□□□□ -1.03
SORL1-207ENST00000528339 PRMT7Q9NVM4 692 aaPredicted RBP8.6□□□□□ -1.03
SORL1-207ENST00000528339 PSMA7O14818 248 aa8.59□□□□□ -1.03
SORL1-207ENST00000528339 SLC16A4O15374 487 aa8.59□□□□□ -1.03
SORL1-207ENST00000528339 PGK1P00558 417 aa8.59□□□□□ -1.03
SORL1-207ENST00000528339 ARF4P18085 180 aaPredicted RBP8.59□□□□□ -1.03
SORL1-207ENST00000528339 ACO1P21399 889 aaKnown RBP8.59□□□□□ -1.03
SORL1-207ENST00000528339 VWA3BQ502W6 1294 aa8.59□□□□□ -1.03
SORL1-207ENST00000528339 ZBTB41Q5SVQ8 909 aa8.59□□□□□ -1.03
SORL1-207ENST00000528339 ARMCX5Q6P1M9 558 aa8.59□□□□□ -1.03
SORL1-207ENST00000528339 MPZL3Q6UWV2 235 aa8.59□□□□□ -1.03
SORL1-207ENST00000528339 KSR1Q8IVT5 923 aa8.59□□□□□ -1.03
SORL1-207ENST00000528339 FAM178BQ8IXR5 827 aa8.59□□□□□ -1.03
SORL1-207ENST00000528339 USP38Q8NB14 1042 aa8.59□□□□□ -1.03
SORL1-207ENST00000528339 RSPH1Q8WYR4 309 aa8.59□□□□□ -1.03
SORL1-207ENST00000528339 JAKMIP2Q96AA8 810 aa8.59□□□□□ -1.03
SORL1-207ENST00000528339 PPP1R10Q96QC0 940 aaKnown RBP8.59□□□□□ -1.03
SORL1-207ENST00000528339 PKMYT1Q99640 499 aa8.59□□□□□ -1.03
SORL1-207ENST00000528339 KIFC3Q9BVG8 833 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms