RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 UBXN11Q5T124 520 aa10.62□□□□□ -0.71
CHD7-208ENST00000528280 SLC27A1Q6PCB7 646 aa10.62□□□□□ -0.71
CHD7-208ENST00000528280 POTEGQ6S5H5 508 aa10.62□□□□□ -0.71
CHD7-208ENST00000528280 TMEM184AQ6ZMB5 413 aa10.62□□□□□ -0.71
CHD7-208ENST00000528280 MAEAQ7L5Y9 396 aa10.62□□□□□ -0.71
CHD7-208ENST00000528280 BRAPQ7Z569 592 aa10.62□□□□□ -0.71
CHD7-208ENST00000528280 DDX53Q86TM3 631 aaKnown RBP10.62□□□□□ -0.71
CHD7-208ENST00000528280 RBM23Q86U06 439 aaKnown RBP10.62□□□□□ -0.71
CHD7-208ENST00000528280 DEPTORQ8TB45 409 aa10.62□□□□□ -0.71
CHD7-208ENST00000528280 ASAP3Q8TDY4 903 aa10.62□□□□□ -0.71
CHD7-208ENST00000528280 SNX29Q8TEQ0 813 aa10.62□□□□□ -0.71
CHD7-208ENST00000528280 AK8Q96MA6 479 aa10.62□□□□□ -0.71
CHD7-208ENST00000528280 ADPGKQ9BRR6 497 aa10.62□□□□□ -0.71
CHD7-208ENST00000528280 BACH2Q9BYV9 841 aa10.62□□□□□ -0.71
CHD7-208ENST00000528280 FZD8Q9H461 694 aa10.62□□□□□ -0.71
CHD7-208ENST00000528280 DDX19AQ9NUU7 478 aaKnown RBP10.62□□□□□ -0.71
CHD7-208ENST00000528280 TBC1D13Q9NVG8 400 aa10.62□□□□□ -0.71
CHD7-208ENST00000528280 INPP5FQ9Y2H2 1132 aa10.62□□□□□ -0.71
CHD7-208ENST00000528280 RBM19Q9Y4C8 960 aaKnown RBP10.62□□□□□ -0.71
CHD7-208ENST00000528280 A0A087WWV3 80 aa10.61□□□□□ -0.71
CHD7-208ENST00000528280 ACKR2O00590 384 aa10.61□□□□□ -0.71
CHD7-208ENST00000528280 N4BP3O15049 544 aa10.61□□□□□ -0.71
CHD7-208ENST00000528280 INPPL1O15357 1258 aa10.61□□□□□ -0.71
CHD7-208ENST00000528280 ZC3H11AO75152 810 aaKnown RBP eCLIP10.61□□□□□ -0.71
CHD7-208ENST00000528280 PDIA4P13667 645 aaKnown RBP10.61□□□□□ -0.71
CHD7-208ENST00000528280 ARF4P18085 180 aaPredicted RBP10.61□□□□□ -0.71
CHD7-208ENST00000528280 ATP2C1P98194 919 aaPredicted RBP10.61□□□□□ -0.71
CHD7-208ENST00000528280 SMAD4Q13485 552 aaKnown RBP10.61□□□□□ -0.71
CHD7-208ENST00000528280 PRPF4BQ13523 1007 aaKnown RBP10.61□□□□□ -0.71
CHD7-208ENST00000528280 CUL4AQ13619 759 aa10.61□□□□□ -0.71
CHD7-208ENST00000528280 SMAD2Q15796 467 aaKnown RBP10.61□□□□□ -0.71
CHD7-208ENST00000528280 TMEM132AQ24JP5 1023 aa10.61□□□□□ -0.71
CHD7-208ENST00000528280 CDCA2Q69YH5 1023 aaPredicted RBP10.61□□□□□ -0.71
CHD7-208ENST00000528280 AGMOQ6ZNB7 445 aa10.61□□□□□ -0.71
CHD7-208ENST00000528280 PPFIBP1Q86W92 1011 aa10.61□□□□□ -0.71
CHD7-208ENST00000528280 ADHFE1Q8IWW8 467 aa10.61□□□□□ -0.71
CHD7-208ENST00000528280 LPPQ93052 612 aa10.61□□□□□ -0.71
CHD7-208ENST00000528280 IGSF21Q96ID5 467 aa10.61□□□□□ -0.71
CHD7-208ENST00000528280 CDK5RAP3Q96JB5 506 aa10.61□□□□□ -0.71
CHD7-208ENST00000528280 COLEC11Q9BWP8 271 aa10.61□□□□□ -0.71
CHD7-208ENST00000528280 BHMT2Q9H2M3 363 aa10.61□□□□□ -0.71
CHD7-208ENST00000528280 NRDE2Q9H7Z3 1164 aa10.61□□□□□ -0.71
CHD7-208ENST00000528280 KCND2Q9NZV8 630 aa10.61□□□□□ -0.71
CHD7-208ENST00000528280 IPPQ9Y573 584 aa10.61□□□□□ -0.71
CHD7-208ENST00000528280 IRAK3Q9Y616 596 aa10.61□□□□□ -0.71
CHD7-208ENST00000528280 ZMYM2Q9UBW7 1377 aa10.61□□□□□ -0.71
CHD7-208ENST00000528280 ARL5CA6NH57 179 aa10.6□□□□□ -0.71
CHD7-208ENST00000528280 K7ERI5 159 aa10.6□□□□□ -0.71
CHD7-208ENST00000528280 MBTPS2O43462 519 aa10.6□□□□□ -0.71
CHD7-208ENST00000528280 DCXO43602 365 aa10.6□□□□□ -0.71
CHD7-208ENST00000528280 SCP2P22307 547 aa10.6□□□□□ -0.71
CHD7-208ENST00000528280 SSTR3P32745 418 aaPredicted RBP10.6□□□□□ -0.71
CHD7-208ENST00000528280 NBR1Q14596 966 aa10.6□□□□□ -0.71
CHD7-208ENST00000528280 AMHR2Q16671 573 aa10.6□□□□□ -0.71
CHD7-208ENST00000528280 LONRF3Q496Y0 759 aa10.6□□□□□ -0.71
CHD7-208ENST00000528280 TPRNQ4KMQ1 711 aa10.6□□□□□ -0.71
CHD7-208ENST00000528280 ADGRD2Q7Z7M1 963 aa10.6□□□□□ -0.71
CHD7-208ENST00000528280 VPS52Q8N1B4 723 aa10.6□□□□□ -0.71
CHD7-208ENST00000528280 SMG8Q8ND04 991 aaKnown RBP10.6□□□□□ -0.71
CHD7-208ENST00000528280 CASP10Q92851 521 aa10.6□□□□□ -0.71
CHD7-208ENST00000528280 INTS4Q96HW7 963 aaKnown RBP10.6□□□□□ -0.71
CHD7-208ENST00000528280 CPB2Q96IY4 423 aa10.6□□□□□ -0.71
CHD7-208ENST00000528280 MSLNLQ96KJ4 702 aa10.6□□□□□ -0.71
CHD7-208ENST00000528280 DRC1Q96MC2 740 aa10.6□□□□□ -0.71
CHD7-208ENST00000528280 EMILIN2Q9BXX0 1053 aa10.6□□□□□ -0.71
CHD7-208ENST00000528280 GPRC5CQ9NQ84 441 aa10.6□□□□□ -0.71
CHD7-208ENST00000528280 DPP7Q9UHL4 492 aa10.6□□□□□ -0.71
CHD7-208ENST00000528280 ZFHX2Q9C0A1 2572 aaPredicted RBP10.59□□□□□ -0.71
CHD7-208ENST00000528280 C2orf71A6NGG8 1288 aa10.59□□□□□ -0.71
CHD7-208ENST00000528280 NT5C1B-RDH14C9J2C7 533 aa10.59□□□□□ -0.71
CHD7-208ENST00000528280 PER2O15055 1255 aa10.59□□□□□ -0.71
CHD7-208ENST00000528280 CSPG5O95196 566 aa10.59□□□□□ -0.71
CHD7-208ENST00000528280 CD2BP2O95400 341 aaKnown RBP10.59□□□□□ -0.71
CHD7-208ENST00000528280 POMCP01189 267 aa10.59□□□□□ -0.71
CHD7-208ENST00000528280 CTSAP10619 480 aa10.59□□□□□ -0.71
CHD7-208ENST00000528280 IL9P15248 144 aa10.59□□□□□ -0.71
CHD7-208ENST00000528280 GTF2F1P35269 517 aaKnown RBP eCLIP10.59□□□□□ -0.71
CHD7-208ENST00000528280 UBA7P41226 1012 aa10.59□□□□□ -0.71
CHD7-208ENST00000528280 SMTNP53814 917 aa10.59□□□□□ -0.71
CHD7-208ENST00000528280 DLX2Q07687 328 aaPredicted RBP10.59□□□□□ -0.71
CHD7-208ENST00000528280 HYIQ5T013 277 aa10.59□□□□□ -0.71
CHD7-208ENST00000528280 PLPP4Q5VZY2 271 aa10.59□□□□□ -0.71
CHD7-208ENST00000528280 ELMSAN1Q6PJG2 1045 aa10.59□□□□□ -0.71
CHD7-208ENST00000528280 HFE2Q6ZVN8 426 aa10.59□□□□□ -0.71
CHD7-208ENST00000528280 ZNF280BQ86YH2 543 aa10.59□□□□□ -0.71
CHD7-208ENST00000528280 CALML4Q96GE6 196 aa10.59□□□□□ -0.71
CHD7-208ENST00000528280 MFSD14AQ96MC6 490 aa10.59□□□□□ -0.71
CHD7-208ENST00000528280 NTPCRQ9BSD7 190 aaKnown RBP10.59□□□□□ -0.71
CHD7-208ENST00000528280 EIF2AQ9BY44 585 aaKnown RBP10.59□□□□□ -0.71
CHD7-208ENST00000528280 GBP3Q9H0R5 595 aa10.59□□□□□ -0.71
CHD7-208ENST00000528280 TMEM134Q9H6X4 195 aa10.59□□□□□ -0.71
CHD7-208ENST00000528280 CLEC1BQ9P126 229 aa10.59□□□□□ -0.71
CHD7-208ENST00000528280 HCSTQ9UBK5 93 aa10.59□□□□□ -0.71
CHD7-208ENST00000528280 TECTAO75443 2155 aa10.58□□□□□ -0.72
CHD7-208ENST00000528280 KMT2EQ8IZD2 1858 aa10.58□□□□□ -0.72
CHD7-208ENST00000528280 VWA3AA6NCI4 1184 aa10.58□□□□□ -0.72
CHD7-208ENST00000528280 C19orf67A6NJJ6 358 aa10.58□□□□□ -0.72
CHD7-208ENST00000528280 CCDC169A6NNP5 214 aa10.58□□□□□ -0.72
CHD7-208ENST00000528280 H0YCG3 227 aa10.58□□□□□ -0.72
CHD7-208ENST00000528280 NRP1O14786 923 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms