RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 INTS2Q9H0H0 1204 aaKnown RBP15.72■□□□□ 0.11
CAPN1-214ENST00000528165 LRMDAQ9H2I8 198 aa15.72■□□□□ 0.11
CAPN1-214ENST00000528165 MTMR4Q9NYA4 1195 aa15.72■□□□□ 0.11
CAPN1-214ENST00000528165 APEX2Q9UBZ4 518 aa15.72■□□□□ 0.11
CAPN1-214ENST00000528165 SMIM24O75264 130 aa15.72■□□□□ 0.11
CAPN1-214ENST00000528165 LRRN2O75325 713 aa15.72■□□□□ 0.11
CAPN1-214ENST00000528165 PEX5P50542 639 aa15.72■□□□□ 0.11
CAPN1-214ENST00000528165 ANKLE1Q8NAG6 615 aa15.72■□□□□ 0.11
CAPN1-214ENST00000528165 CRAMP1Q96RY5 1269 aa15.72■□□□□ 0.11
CAPN1-214ENST00000528165 WNT8AQ9H1J5 351 aa15.72■□□□□ 0.11
CAPN1-214ENST00000528165 MYLK2Q9H1R3 596 aa15.72■□□□□ 0.11
CAPN1-214ENST00000528165 ETAA1Q9NY74 926 aa15.72■□□□□ 0.11
CAPN1-214ENST00000528165 CYP39A1Q9NYL5 469 aa15.72■□□□□ 0.11
CAPN1-214ENST00000528165 KCNG1Q9UIX4 513 aa15.72■□□□□ 0.11
CAPN1-214ENST00000528165 MYO3BQ8WXR4 1341 aa15.72■□□□□ 0.11
CAPN1-214ENST00000528165 DDX60LQ5H9U9 1706 aaKnown RBP15.72■□□□□ 0.11
CAPN1-214ENST00000528165 UPP2O95045 317 aa15.72■□□□□ 0.11
CAPN1-214ENST00000528165 GPC5P78333 572 aa15.72■□□□□ 0.11
CAPN1-214ENST00000528165 MXRA7P84157 204 aa15.72■□□□□ 0.11
CAPN1-214ENST00000528165 ANO7Q6IWH7 933 aa15.72■□□□□ 0.11
CAPN1-214ENST00000528165 PPP1R21Q6ZMI0 780 aa15.72■□□□□ 0.11
CAPN1-214ENST00000528165 FAM47EQ6ZV65 393 aa15.72■□□□□ 0.11
CAPN1-214ENST00000528165 ERP27Q96DN0 273 aa15.72■□□□□ 0.11
CAPN1-214ENST00000528165 WHRNQ9P202 907 aa15.72■□□□□ 0.11
CAPN1-214ENST00000528165 ASIC3Q9UHC3 531 aa15.72■□□□□ 0.11
CAPN1-214ENST00000528165 ZMYND8Q9ULU4 1186 aaPredicted RBP15.72■□□□□ 0.11
CAPN1-214ENST00000528165 USP17L15C9J2P7 530 aa15.71■□□□□ 0.11
CAPN1-214ENST00000528165 USP17L13C9JLJ4 530 aa15.71■□□□□ 0.11
CAPN1-214ENST00000528165 USP17L11C9JVI0 530 aa15.71■□□□□ 0.11
CAPN1-214ENST00000528165 USP17L18D6R9N7 530 aa15.71■□□□□ 0.11
CAPN1-214ENST00000528165 USP17L22D6RA61 530 aa15.71■□□□□ 0.11
CAPN1-214ENST00000528165 USP17L17D6RBQ6 530 aa15.71■□□□□ 0.11
CAPN1-214ENST00000528165 USP17L19D6RCP7 530 aa15.71■□□□□ 0.11
CAPN1-214ENST00000528165 USP17L20D6RJB6 530 aa15.71■□□□□ 0.11
CAPN1-214ENST00000528165 TGFB1I1O43294 461 aa15.71■□□□□ 0.11
CAPN1-214ENST00000528165 TTC4O95801 387 aa15.71■□□□□ 0.11
CAPN1-214ENST00000528165 SNHG28P0DPA3 235 aa15.71■□□□□ 0.11
CAPN1-214ENST00000528165 RPA1P27694 616 aa15.71■□□□□ 0.11
CAPN1-214ENST00000528165 USP17L24Q0WX57 530 aa15.71■□□□□ 0.11
CAPN1-214ENST00000528165 KIF22Q14807 665 aa15.71■□□□□ 0.11
CAPN1-214ENST00000528165 GNPTABQ3T906 1256 aa15.71■□□□□ 0.11
CAPN1-214ENST00000528165 USP17L6PQ6QN14 398 aa15.71■□□□□ 0.11
CAPN1-214ENST00000528165 SRRM1Q8IYB3 904 aaKnown RBP15.71■□□□□ 0.11
CAPN1-214ENST00000528165 NUDCD1Q96RS6 583 aa15.71■□□□□ 0.11
CAPN1-214ENST00000528165 POP1Q99575 1024 aaKnown RBP15.71■□□□□ 0.11
CAPN1-214ENST00000528165 AAASQ9NRG9 546 aa15.71■□□□□ 0.11
CAPN1-214ENST00000528165 ANKIB1Q9P2G1 1089 aa15.71■□□□□ 0.11
CAPN1-214ENST00000528165 TBK1Q9UHD2 729 aa15.71■□□□□ 0.11
CAPN1-214ENST00000528165 ATF5Q9Y2D1 282 aaPredicted RBP15.71■□□□□ 0.11
CAPN1-214ENST00000528165 THAP12O43422 761 aa15.71■□□□□ 0.1
CAPN1-214ENST00000528165 PEX11AO75192 247 aa15.71■□□□□ 0.1
CAPN1-214ENST00000528165 AP1G2O75843 785 aa15.71■□□□□ 0.1
CAPN1-214ENST00000528165 PDHA1P08559 390 aa15.71■□□□□ 0.1
CAPN1-214ENST00000528165 ATP6V1C1P21283 382 aa15.71■□□□□ 0.1
CAPN1-214ENST00000528165 IL9RQ01113 521 aa15.71■□□□□ 0.1
CAPN1-214ENST00000528165 ADCY1Q08828 1119 aa15.71■□□□□ 0.1
CAPN1-214ENST00000528165 ZNF543Q08ER8 600 aa15.71■□□□□ 0.1
CAPN1-214ENST00000528165 CBWD6Q4V339 395 aa15.71■□□□□ 0.1
CAPN1-214ENST00000528165 CBWD3Q5JTY5 395 aa15.71■□□□□ 0.1
CAPN1-214ENST00000528165 SLC10A5Q5PT55 438 aa15.71■□□□□ 0.1
CAPN1-214ENST00000528165 CBWD5Q5RIA9 395 aa15.71■□□□□ 0.1
CAPN1-214ENST00000528165 RNF207Q6ZRF8 634 aa15.71■□□□□ 0.1
CAPN1-214ENST00000528165 SLC20A1Q8WUM9 679 aa15.71■□□□□ 0.1
CAPN1-214ENST00000528165 TMEM237Q96Q45 408 aa15.71■□□□□ 0.1
CAPN1-214ENST00000528165 RUSC1Q9BVN2 902 aa15.71■□□□□ 0.1
CAPN1-214ENST00000528165 BHMT2Q9H2M3 363 aa15.71■□□□□ 0.1
CAPN1-214ENST00000528165 ANKRD33BA6NCL7 494 aa15.7■□□□□ 0.1
CAPN1-214ENST00000528165 FOXN3O00409 490 aaPredicted RBP15.7■□□□□ 0.1
CAPN1-214ENST00000528165 ABLIM1O14639 778 aa15.7■□□□□ 0.1
CAPN1-214ENST00000528165 ZBTB5O15062 677 aa15.7■□□□□ 0.1
CAPN1-214ENST00000528165 SPOPO43791 374 aa15.7■□□□□ 0.1
CAPN1-214ENST00000528165 TPBGLP0DKB5 382 aa15.7■□□□□ 0.1
CAPN1-214ENST00000528165 TAC1P20366 129 aa15.7■□□□□ 0.1
CAPN1-214ENST00000528165 TARSP26639 723 aaKnown RBP15.7■□□□□ 0.1
CAPN1-214ENST00000528165 CHKAP35790 457 aa15.7■□□□□ 0.1
CAPN1-214ENST00000528165 SLC16A2P36021 539 aa15.7■□□□□ 0.1
CAPN1-214ENST00000528165 PAPOLAP51003 745 aaKnown RBP15.7■□□□□ 0.1
CAPN1-214ENST00000528165 POLGP54098 1239 aaPredicted RBP15.7■□□□□ 0.1
CAPN1-214ENST00000528165 KRT17Q04695 432 aa15.7■□□□□ 0.1
CAPN1-214ENST00000528165 KYNUQ16719 465 aa15.7■□□□□ 0.1
CAPN1-214ENST00000528165 TTBK2Q6IQ55 1244 aa15.7■□□□□ 0.1
CAPN1-214ENST00000528165 LRRC37BQ96QE4 947 aa15.7■□□□□ 0.1
CAPN1-214ENST00000528165 PAPOLBQ9NRJ5 636 aaKnown RBP15.7■□□□□ 0.1
CAPN1-214ENST00000528165 STRCP1A6NGW2 1772 aa15.7■□□□□ 0.1
CAPN1-214ENST00000528165 SPATA31C1P0DKV0 1188 aa15.7■□□□□ 0.1
CAPN1-214ENST00000528165 BRD2P25440 801 aaKnown RBP15.7■□□□□ 0.1
CAPN1-214ENST00000528165 MYL7Q01449 175 aa15.7■□□□□ 0.1
CAPN1-214ENST00000528165 TSNAXIP1Q2TAA8 658 aa15.7■□□□□ 0.1
CAPN1-214ENST00000528165 SEPT14Q6ZU15 432 aa15.7■□□□□ 0.1
CAPN1-214ENST00000528165 FAM13CQ8NE31 585 aa15.7■□□□□ 0.1
CAPN1-214ENST00000528165 MORC4Q8TE76 937 aa15.7■□□□□ 0.1
CAPN1-214ENST00000528165 PAIP2Q9BPZ3 127 aaKnown RBP15.7■□□□□ 0.1
CAPN1-214ENST00000528165 IKZF4Q9H2S9 585 aa15.7■□□□□ 0.1
CAPN1-214ENST00000528165 BCAS3Q9H6U6 928 aa15.7■□□□□ 0.1
CAPN1-214ENST00000528165 DNAJC18Q9H819 358 aa15.7■□□□□ 0.1
CAPN1-214ENST00000528165 DNAJC17Q9NVM6 304 aaKnown RBP15.7■□□□□ 0.1
CAPN1-214ENST00000528165 CHORDC1Q9UHD1 332 aaPredicted RBP15.7■□□□□ 0.1
CAPN1-214ENST00000528165 HAO1Q9UJM8 370 aa15.7■□□□□ 0.1
CAPN1-214ENST00000528165 FRMD4BQ9Y2L6 1034 aa15.7■□□□□ 0.1
CAPN1-214ENST00000528165 SPATA31A1Q5TZJ5 1347 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms