RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 UBN1Q9NPG3 1134 aa17.17■□□□□ 0.34
CAPN1-213ENST00000527897 PARP2Q9UGN5 583 aa17.17■□□□□ 0.34
CAPN1-213ENST00000527897 BARX2Q9UMQ3 279 aaPredicted RBP17.17■□□□□ 0.34
CAPN1-213ENST00000527897 USP20Q9Y2K6 914 aa17.17■□□□□ 0.34
CAPN1-213ENST00000527897 CCDC169A6NNP5 214 aa17.16■□□□□ 0.34
CAPN1-213ENST00000527897 HIDE1A8MVS5 230 aa17.16■□□□□ 0.34
CAPN1-213ENST00000527897 FSCN2O14926 492 aa17.16■□□□□ 0.34
CAPN1-213ENST00000527897 B4GALT3O60512 393 aa17.16■□□□□ 0.34
CAPN1-213ENST00000527897 DDHD2O94830 711 aa17.16■□□□□ 0.34
CAPN1-213ENST00000527897 GALTP07902 379 aa17.16■□□□□ 0.34
CAPN1-213ENST00000527897 AKAP5P24588 427 aa17.16■□□□□ 0.34
CAPN1-213ENST00000527897 SSTR3P32745 418 aaPredicted RBP17.16■□□□□ 0.34
CAPN1-213ENST00000527897 RBM10P98175 930 aaKnown RBP17.16■□□□□ 0.34
CAPN1-213ENST00000527897 RAD51AP2Q09MP3 1159 aa17.16■□□□□ 0.34
CAPN1-213ENST00000527897 PRPF4BQ13523 1007 aaKnown RBP17.16■□□□□ 0.34
CAPN1-213ENST00000527897 MAPK6Q16659 721 aa17.16■□□□□ 0.34
CAPN1-213ENST00000527897 CDCA2Q69YH5 1023 aaPredicted RBP17.16■□□□□ 0.34
CAPN1-213ENST00000527897 KCNK18Q7Z418 384 aa17.16■□□□□ 0.34
CAPN1-213ENST00000527897 VPS52Q8N1B4 723 aa17.16■□□□□ 0.34
CAPN1-213ENST00000527897 TMEM87AQ8NBN3 555 aa17.16■□□□□ 0.34
CAPN1-213ENST00000527897 KIFAP3Q92845 792 aa17.16■□□□□ 0.34
CAPN1-213ENST00000527897 ZFP42Q96MM3 310 aa17.16■□□□□ 0.34
CAPN1-213ENST00000527897 GAD1Q99259 594 aa17.16■□□□□ 0.34
CAPN1-213ENST00000527897 NGRNQ9NPE2 291 aaKnown RBP17.16■□□□□ 0.34
CAPN1-213ENST00000527897 KLK14Q9P0G3 267 aa17.16■□□□□ 0.34
CAPN1-213ENST00000527897 KANSL3Q9P2N6 904 aa17.16■□□□□ 0.34
CAPN1-213ENST00000527897 CD207Q9UJ71 328 aa17.16■□□□□ 0.34
CAPN1-213ENST00000527897 FAM50BQ9Y247 325 aa17.16■□□□□ 0.34
CAPN1-213ENST00000527897 BDP1A6H8Y1 2624 aa17.16■□□□□ 0.34
CAPN1-213ENST00000527897 TDRD15B5MCY1 1934 aaKnown RBP17.15■□□□□ 0.34
CAPN1-213ENST00000527897 ARL5CA6NH57 179 aa17.15■□□□□ 0.34
CAPN1-213ENST00000527897 TTLL13PA6NNM8 815 aa17.15■□□□□ 0.34
CAPN1-213ENST00000527897 K7ELQ4 463 aaPredicted RBP17.15■□□□□ 0.34
CAPN1-213ENST00000527897 HIP1RO75146 1068 aa17.15■□□□□ 0.34
CAPN1-213ENST00000527897 GLP2RO95838 553 aa17.15■□□□□ 0.34
CAPN1-213ENST00000527897 OR1G1P47890 313 aa17.15■□□□□ 0.34
CAPN1-213ENST00000527897 SCNN1GP51170 649 aa17.15■□□□□ 0.34
CAPN1-213ENST00000527897 SMC1AQ14683 1233 aaKnown RBP17.15■□□□□ 0.34
CAPN1-213ENST00000527897 BMS1Q14692 1282 aaKnown RBP17.15■□□□□ 0.34
CAPN1-213ENST00000527897 DUSP6Q16828 381 aa17.15■□□□□ 0.34
CAPN1-213ENST00000527897 ARL6IP4Q66PJ3 421 aaKnown RBP17.15■□□□□ 0.34
CAPN1-213ENST00000527897 CABP7Q86V35 215 aa17.15■□□□□ 0.34
CAPN1-213ENST00000527897 BCL7CQ8WUZ0 217 aaPredicted RBP17.15■□□□□ 0.34
CAPN1-213ENST00000527897 AUTS2Q8WXX7 1259 aa17.15■□□□□ 0.34
CAPN1-213ENST00000527897 IGSF21Q96ID5 467 aa17.15■□□□□ 0.34
CAPN1-213ENST00000527897 PRIMPOLQ96LW4 560 aa17.15■□□□□ 0.34
CAPN1-213ENST00000527897 RUSC1Q9BVN2 902 aa17.15■□□□□ 0.34
CAPN1-213ENST00000527897 FZD8Q9H461 694 aa17.15■□□□□ 0.34
CAPN1-213ENST00000527897 PRG3Q9Y2Y8 225 aaPredicted RBP17.15■□□□□ 0.34
CAPN1-213ENST00000527897 A0A1B0GUA9 196 aa17.14■□□□□ 0.33
CAPN1-213ENST00000527897 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.14■□□□□ 0.33
CAPN1-213ENST00000527897 N4BP3O15049 544 aa17.14■□□□□ 0.33
CAPN1-213ENST00000527897 CXCL14O95715 111 aa17.14■□□□□ 0.33
CAPN1-213ENST00000527897 PEX3P56589 373 aa17.14■□□□□ 0.33
CAPN1-213ENST00000527897 SF3A1Q15459 793 aaKnown RBP17.14■□□□□ 0.33
CAPN1-213ENST00000527897 RINT1Q6NUQ1 792 aa17.14■□□□□ 0.33
CAPN1-213ENST00000527897 PPP4R3CPQ6ZMV5 832 aa17.14■□□□□ 0.33
CAPN1-213ENST00000527897 FAM178BQ8IXR5 827 aa17.14■□□□□ 0.33
CAPN1-213ENST00000527897 RASSF8Q8NHQ8 419 aa17.14■□□□□ 0.33
CAPN1-213ENST00000527897 PNMA5Q96PV4 448 aa17.14■□□□□ 0.33
CAPN1-213ENST00000527897 CDCA3Q99618 268 aaPredicted RBP17.14■□□□□ 0.33
CAPN1-213ENST00000527897 NT5C3AQ9H0P0 336 aa17.14■□□□□ 0.33
CAPN1-213ENST00000527897 PDZD7Q9H5P4 517 aa17.14■□□□□ 0.33
CAPN1-213ENST00000527897 FAN1Q9Y2M0 1017 aa17.14■□□□□ 0.33
CAPN1-213ENST00000527897 CARNS1A5YM72 827 aa17.13■□□□□ 0.33
CAPN1-213ENST00000527897 MBTPS2O43462 519 aa17.13■□□□□ 0.33
CAPN1-213ENST00000527897 ALDH2P05091 517 aa17.13■□□□□ 0.33
CAPN1-213ENST00000527897 SYT1P21579 422 aa17.13■□□□□ 0.33
CAPN1-213ENST00000527897 UBA7P41226 1012 aa17.13■□□□□ 0.33
CAPN1-213ENST00000527897 CEBPZQ03701 1054 aaKnown RBP17.13■□□□□ 0.33
CAPN1-213ENST00000527897 DMP1Q13316 513 aaPredicted RBP17.13■□□□□ 0.33
CAPN1-213ENST00000527897 SMAD4Q13485 552 aaKnown RBP17.13■□□□□ 0.33
CAPN1-213ENST00000527897 DHX8Q14562 1220 aaKnown RBP17.13■□□□□ 0.33
CAPN1-213ENST00000527897 FAM187BQ17R55 369 aa17.13■□□□□ 0.33
CAPN1-213ENST00000527897 DRC1Q96MC2 740 aa17.13■□□□□ 0.33
CAPN1-213ENST00000527897 RPS6KC1Q96S38 1066 aa17.13■□□□□ 0.33
CAPN1-213ENST00000527897 ADPGKQ9BRR6 497 aa17.13■□□□□ 0.33
CAPN1-213ENST00000527897 APOL5Q9BWW9 433 aa17.13■□□□□ 0.33
CAPN1-213ENST00000527897 CCDC113Q9H0I3 377 aa17.13■□□□□ 0.33
CAPN1-213ENST00000527897 MIOSQ9NXC5 875 aa17.13■□□□□ 0.33
CAPN1-213ENST00000527897 CLEC1BQ9P126 229 aa17.13■□□□□ 0.33
CAPN1-213ENST00000527897 GIT1Q9Y2X7 761 aa17.13■□□□□ 0.33
CAPN1-213ENST00000527897 MYH11P35749 1972 aa17.13■□□□□ 0.33
CAPN1-213ENST00000527897 C2orf71A6NGG8 1288 aa17.12■□□□□ 0.33
CAPN1-213ENST00000527897 SFI1A8K8P3 1242 aa17.12■□□□□ 0.33
CAPN1-213ENST00000527897 K7ERI5 159 aa17.12■□□□□ 0.33
CAPN1-213ENST00000527897 ACKR2O00590 384 aa17.12■□□□□ 0.33
CAPN1-213ENST00000527897 NRP1O14786 923 aa17.12■□□□□ 0.33
CAPN1-213ENST00000527897 BMP15O95972 392 aa17.12■□□□□ 0.33
CAPN1-213ENST00000527897 EDN1P05305 212 aa17.12■□□□□ 0.33
CAPN1-213ENST00000527897 PLA2G4BP0C869 781 aa17.12■□□□□ 0.33
CAPN1-213ENST00000527897 SRGAP2BP0DMP2 458 aa17.12■□□□□ 0.33
CAPN1-213ENST00000527897 NPTX2P47972 431 aa17.12■□□□□ 0.33
CAPN1-213ENST00000527897 EFNA5P52803 228 aa17.12■□□□□ 0.33
CAPN1-213ENST00000527897 FAM173BQ6P4H8 233 aa17.12■□□□□ 0.33
CAPN1-213ENST00000527897 C1orf186Q6ZWK4 172 aa17.12■□□□□ 0.33
CAPN1-213ENST00000527897 DDX53Q86TM3 631 aaKnown RBP17.12■□□□□ 0.33
CAPN1-213ENST00000527897 GJD3Q8N144 294 aa17.12■□□□□ 0.33
CAPN1-213ENST00000527897 MRPL43Q8N983 215 aaKnown RBP17.12■□□□□ 0.33
CAPN1-213ENST00000527897 VN1R2Q8NFZ6 395 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms