RNA–Protein interactions for RNA: ENST00000526988.1

BEST1-205, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-205ENST00000526988 RBM10P98175 930 aaKnown RBP17.96■□□□□ 0.47
BEST1-205ENST00000526988 SMAD4Q13485 552 aaKnown RBP17.96■□□□□ 0.47
BEST1-205ENST00000526988 PPP2R5AQ15172 486 aa17.96■□□□□ 0.47
BEST1-205ENST00000526988 CDCA2Q69YH5 1023 aaPredicted RBP17.96■□□□□ 0.47
BEST1-205ENST00000526988 LLGL2Q6P1M3 1020 aa17.96■□□□□ 0.47
BEST1-205ENST00000526988 SLC27A1Q6PCB7 646 aa17.96■□□□□ 0.47
BEST1-205ENST00000526988 VPS52Q8N1B4 723 aa17.96■□□□□ 0.47
BEST1-205ENST00000526988 TMEM87AQ8NBN3 555 aa17.96■□□□□ 0.47
BEST1-205ENST00000526988 IGSF21Q96ID5 467 aa17.96■□□□□ 0.47
BEST1-205ENST00000526988 MSLNLQ96KJ4 702 aa17.96■□□□□ 0.47
BEST1-205ENST00000526988 GAD1Q99259 594 aa17.96■□□□□ 0.47
BEST1-205ENST00000526988 NXF3Q9H4D5 531 aaKnown RBP17.96■□□□□ 0.47
BEST1-205ENST00000526988 PLXNA4Q9HCM2 1894 aa17.95■□□□□ 0.46
BEST1-205ENST00000526988 A0A1B0GUA9 196 aa17.95■□□□□ 0.46
BEST1-205ENST00000526988 FSD2A1L4K1 749 aa17.95■□□□□ 0.46
BEST1-205ENST00000526988 VPS37CA5D8V6 355 aaPredicted RBP17.95■□□□□ 0.46
BEST1-205ENST00000526988 VWA3AA6NCI4 1184 aa17.95■□□□□ 0.46
BEST1-205ENST00000526988 ARL5CA6NH57 179 aa17.95■□□□□ 0.46
BEST1-205ENST00000526988 B4GALT3O60512 393 aa17.95■□□□□ 0.46
BEST1-205ENST00000526988 EYA4O95677 639 aa17.95■□□□□ 0.46
BEST1-205ENST00000526988 MLH1P40692 756 aa17.95■□□□□ 0.46
BEST1-205ENST00000526988 PRPF4BQ13523 1007 aaKnown RBP17.95■□□□□ 0.46
BEST1-205ENST00000526988 CUL4AQ13619 759 aa17.95■□□□□ 0.46
BEST1-205ENST00000526988 MAPK6Q16659 721 aa17.95■□□□□ 0.46
BEST1-205ENST00000526988 PPP4R3CPQ6ZMV5 832 aa17.95■□□□□ 0.46
BEST1-205ENST00000526988 MRPL43Q8N983 215 aaKnown RBP17.95■□□□□ 0.46
BEST1-205ENST00000526988 VN1R2Q8NFZ6 395 aa17.95■□□□□ 0.46
BEST1-205ENST00000526988 BCL7CQ8WUZ0 217 aaPredicted RBP17.95■□□□□ 0.46
BEST1-205ENST00000526988 KIFAP3Q92845 792 aa17.95■□□□□ 0.46
BEST1-205ENST00000526988 PRIMPOLQ96LW4 560 aa17.95■□□□□ 0.46
BEST1-205ENST00000526988 MMTAG2Q9BU76 263 aaKnown RBP17.95■□□□□ 0.46
BEST1-205ENST00000526988 KIFC3Q9BVG8 833 aa17.95■□□□□ 0.46
BEST1-205ENST00000526988 FZD8Q9H461 694 aa17.95■□□□□ 0.46
BEST1-205ENST00000526988 PARP2Q9UGN5 583 aa17.95■□□□□ 0.46
BEST1-205ENST00000526988 USP20Q9Y2K6 914 aa17.95■□□□□ 0.46
BEST1-205ENST00000526988 FAN1Q9Y2M0 1017 aa17.95■□□□□ 0.46
BEST1-205ENST00000526988 C2orf71A6NGG8 1288 aa17.94■□□□□ 0.46
BEST1-205ENST00000526988 SSBP05455 408 aaKnown RBP eCLIP17.94■□□□□ 0.46
BEST1-205ENST00000526988 PRKCBP05771 671 aa17.94■□□□□ 0.46
BEST1-205ENST00000526988 SRGAP2BP0DMP2 458 aa17.94■□□□□ 0.46
BEST1-205ENST00000526988 AKAP5P24588 427 aa17.94■□□□□ 0.46
BEST1-205ENST00000526988 DDX53Q86TM3 631 aaKnown RBP17.94■□□□□ 0.46
BEST1-205ENST00000526988 AUTS2Q8WXX7 1259 aa17.94■□□□□ 0.46
BEST1-205ENST00000526988 ZFP42Q96MM3 310 aa17.94■□□□□ 0.46
BEST1-205ENST00000526988 PLIN2Q99541 437 aa17.94■□□□□ 0.46
BEST1-205ENST00000526988 TMEM175Q9BSA9 504 aa17.94■□□□□ 0.46
BEST1-205ENST00000526988 KLK14Q9P0G3 267 aa17.94■□□□□ 0.46
BEST1-205ENST00000526988 PRKAG3Q9UGI9 489 aa17.94■□□□□ 0.46
BEST1-205ENST00000526988 GIT1Q9Y2X7 761 aa17.94■□□□□ 0.46
BEST1-205ENST00000526988 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.93■□□□□ 0.46
BEST1-205ENST00000526988 TTLL13PA6NNM8 815 aa17.93■□□□□ 0.46
BEST1-205ENST00000526988 CCDC169A6NNP5 214 aa17.93■□□□□ 0.46
BEST1-205ENST00000526988 NRP1O14786 923 aa17.93■□□□□ 0.46
BEST1-205ENST00000526988 N4BP3O15049 544 aa17.93■□□□□ 0.46
BEST1-205ENST00000526988 OR1G1P47890 313 aa17.93■□□□□ 0.46
BEST1-205ENST00000526988 SCNN1GP51170 649 aa17.93■□□□□ 0.46
BEST1-205ENST00000526988 COASYQ13057 564 aa17.93■□□□□ 0.46
BEST1-205ENST00000526988 SMAD2Q15796 467 aaKnown RBP17.93■□□□□ 0.46
BEST1-205ENST00000526988 FAM187BQ17R55 369 aa17.93■□□□□ 0.46
BEST1-205ENST00000526988 ARL6IP4Q66PJ3 421 aaKnown RBP17.93■□□□□ 0.46
BEST1-205ENST00000526988 KCNK18Q7Z418 384 aa17.93■□□□□ 0.46
BEST1-205ENST00000526988 BRAPQ7Z569 592 aa17.93■□□□□ 0.46
BEST1-205ENST00000526988 ADHFE1Q8IWW8 467 aa17.93■□□□□ 0.46
BEST1-205ENST00000526988 CDK5RAP3Q96JB5 506 aa17.93■□□□□ 0.46
BEST1-205ENST00000526988 MIOSQ9NXC5 875 aa17.93■□□□□ 0.46
BEST1-205ENST00000526988 PRG3Q9Y2Y8 225 aaPredicted RBP17.93■□□□□ 0.46
BEST1-205ENST00000526988 ATG2AQ2TAZ0 1938 aa17.93■□□□□ 0.46
BEST1-205ENST00000526988 ACKR2O00590 384 aa17.92■□□□□ 0.46
BEST1-205ENST00000526988 PDCP20941 246 aa17.92■□□□□ 0.46
BEST1-205ENST00000526988 EFNA5P52803 228 aa17.92■□□□□ 0.46
BEST1-205ENST00000526988 PEX3P56589 373 aa17.92■□□□□ 0.46
BEST1-205ENST00000526988 ZP2Q05996 745 aa17.92■□□□□ 0.46
BEST1-205ENST00000526988 SMRP1Q8NCR6 262 aa17.92■□□□□ 0.46
BEST1-205ENST00000526988 KHSRPQ92945 711 aaKnown RBP eCLIP17.92■□□□□ 0.46
BEST1-205ENST00000526988 RUSC1Q9BVN2 902 aa17.92■□□□□ 0.46
BEST1-205ENST00000526988 APOL5Q9BWW9 433 aa17.92■□□□□ 0.46
BEST1-205ENST00000526988 CCDC113Q9H0I3 377 aa17.92■□□□□ 0.46
BEST1-205ENST00000526988 ZBP1Q9H171 429 aa17.92■□□□□ 0.46
BEST1-205ENST00000526988 PDZD7Q9H5P4 517 aa17.92■□□□□ 0.46
BEST1-205ENST00000526988 EPHX3Q9H6B9 360 aa17.92■□□□□ 0.46
BEST1-205ENST00000526988 FOXD4L1Q9NU39 408 aa17.92■□□□□ 0.46
BEST1-205ENST00000526988 K7ERI5 159 aa17.91■□□□□ 0.46
BEST1-205ENST00000526988 CLASP2O75122 1294 aaKnown RBP17.91■□□□□ 0.46
BEST1-205ENST00000526988 HIP1RO75146 1068 aa17.91■□□□□ 0.46
BEST1-205ENST00000526988 NR1I2O75469 434 aa17.91■□□□□ 0.46
BEST1-205ENST00000526988 CTSAP10619 480 aa17.91■□□□□ 0.46
BEST1-205ENST00000526988 RINT1Q6NUQ1 792 aa17.91■□□□□ 0.46
BEST1-205ENST00000526988 COLGALT2Q8IYK4 626 aa17.91■□□□□ 0.46
BEST1-205ENST00000526988 PNMA5Q96PV4 448 aa17.91■□□□□ 0.46
BEST1-205ENST00000526988 RPS6KC1Q96S38 1066 aa17.91■□□□□ 0.46
BEST1-205ENST00000526988 POP1Q99575 1024 aaKnown RBP17.91■□□□□ 0.46
BEST1-205ENST00000526988 ADPGKQ9BRR6 497 aa17.91■□□□□ 0.46
BEST1-205ENST00000526988 VN1R3Q9BXE9 311 aa17.91■□□□□ 0.46
BEST1-205ENST00000526988 USP15Q9Y4E8 981 aaPredicted RBP17.91■□□□□ 0.46
BEST1-205ENST00000526988 INPPL1O15357 1258 aa17.9■□□□□ 0.46
BEST1-205ENST00000526988 BMP15O95972 392 aa17.9■□□□□ 0.46
BEST1-205ENST00000526988 NPTX2P47972 431 aa17.9■□□□□ 0.46
BEST1-205ENST00000526988 RAD51AP2Q09MP3 1159 aa17.9■□□□□ 0.46
BEST1-205ENST00000526988 DMP1Q13316 513 aaPredicted RBP17.9■□□□□ 0.46
BEST1-205ENST00000526988 GIT2Q14161 759 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms