RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 OTOGLQ3ZCN5 2332 aa13.08□□□□□ -0.31
CAPN1-204ENST00000526468 NOTCH4Q99466 2003 aa13.08□□□□□ -0.31
CAPN1-204ENST00000526468 ANK1P16157 1881 aa13.08□□□□□ -0.32
CAPN1-204ENST00000526468 CCNT1O60563 726 aaKnown RBP13.08□□□□□ -0.32
CAPN1-204ENST00000526468 DDHD2O94830 711 aa13.08□□□□□ -0.32
CAPN1-204ENST00000526468 CNPP09543 421 aaKnown RBP13.08□□□□□ -0.32
CAPN1-204ENST00000526468 YWHABP31946 246 aaKnown RBP13.08□□□□□ -0.32
CAPN1-204ENST00000526468 MLH1P40692 756 aa13.08□□□□□ -0.32
CAPN1-204ENST00000526468 CLCN4P51793 760 aa13.08□□□□□ -0.32
CAPN1-204ENST00000526468 AK2P54819 239 aa13.08□□□□□ -0.32
CAPN1-204ENST00000526468 CYP4A11Q02928 519 aa13.08□□□□□ -0.32
CAPN1-204ENST00000526468 LAMTOR4Q0VGL1 99 aa13.08□□□□□ -0.32
CAPN1-204ENST00000526468 CWF19L1Q69YN2 538 aaKnown RBP13.08□□□□□ -0.32
CAPN1-204ENST00000526468 ASTLQ6HA08 431 aaPredicted RBP13.08□□□□□ -0.32
CAPN1-204ENST00000526468 PIK3AP1Q6ZUJ8 805 aa13.08□□□□□ -0.32
CAPN1-204ENST00000526468 MTERF4Q7Z6M4 381 aaKnown RBP13.08□□□□□ -0.32
CAPN1-204ENST00000526468 GPR149Q86SP6 731 aa13.08□□□□□ -0.32
CAPN1-204ENST00000526468 ZNF579Q8NAF0 562 aaKnown RBP13.08□□□□□ -0.32
CAPN1-204ENST00000526468 PRPF31Q8WWY3 499 aaKnown RBP13.08□□□□□ -0.32
CAPN1-204ENST00000526468 KLHL5Q96PQ7 755 aa13.08□□□□□ -0.32
CAPN1-204ENST00000526468 MTRQ99707 1265 aa13.08□□□□□ -0.32
CAPN1-204ENST00000526468 APOL6Q9BWW8 343 aa13.08□□□□□ -0.32
CAPN1-204ENST00000526468 DHX33Q9H6R0 707 aaKnown RBP13.08□□□□□ -0.32
CAPN1-204ENST00000526468 ZSWIM6Q9HCJ5 1215 aa13.08□□□□□ -0.32
CAPN1-204ENST00000526468 MARCH5Q9NX47 278 aa13.08□□□□□ -0.32
CAPN1-204ENST00000526468 CHMP5Q9NZZ3 219 aa13.08□□□□□ -0.32
CAPN1-204ENST00000526468 FBXL21Q9UKT6 434 aa13.08□□□□□ -0.32
CAPN1-204ENST00000526468 PPME1Q9Y570 386 aa13.08□□□□□ -0.32
CAPN1-204ENST00000526468 GAS2O43903 313 aaKnown RBP13.07□□□□□ -0.32
CAPN1-204ENST00000526468 SOD2P04179 222 aa13.07□□□□□ -0.32
CAPN1-204ENST00000526468 P4HBP07237 508 aaKnown RBP13.07□□□□□ -0.32
CAPN1-204ENST00000526468 ADH1AP07327 375 aa13.07□□□□□ -0.32
CAPN1-204ENST00000526468 ITGA4P13612 1032 aa13.07□□□□□ -0.32
CAPN1-204ENST00000526468 XBP1P17861 261 aa13.07□□□□□ -0.32
CAPN1-204ENST00000526468 RFX1P22670 979 aa13.07□□□□□ -0.32
CAPN1-204ENST00000526468 OR1G1P47890 313 aa13.07□□□□□ -0.32
CAPN1-204ENST00000526468 GLUD2P49448 558 aa13.07□□□□□ -0.32
CAPN1-204ENST00000526468 AFF1P51825 1210 aaKnown RBP13.07□□□□□ -0.32
CAPN1-204ENST00000526468 XKR9Q5GH70 373 aa13.07□□□□□ -0.32
CAPN1-204ENST00000526468 UBXN11Q5T124 520 aa13.07□□□□□ -0.32
CAPN1-204ENST00000526468 ELMSAN1Q6PJG2 1045 aa13.07□□□□□ -0.32
CAPN1-204ENST00000526468 FERMT3Q86UX7 667 aa13.07□□□□□ -0.32
CAPN1-204ENST00000526468 EXOC8Q8IYI6 725 aa13.07□□□□□ -0.32
CAPN1-204ENST00000526468 TCP11Q8WWU5 503 aa13.07□□□□□ -0.32
CAPN1-204ENST00000526468 ZNF274Q96GC6 653 aaPredicted RBP13.07□□□□□ -0.32
CAPN1-204ENST00000526468 SNX27Q96L92 541 aa13.07□□□□□ -0.32
CAPN1-204ENST00000526468 FAM20AQ96MK3 541 aa13.07□□□□□ -0.32
CAPN1-204ENST00000526468 PHF20Q9BVI0 1012 aa13.07□□□□□ -0.32
CAPN1-204ENST00000526468 KANSL3Q9P2N6 904 aa13.07□□□□□ -0.32
CAPN1-204ENST00000526468 FAN1Q9Y2M0 1017 aa13.07□□□□□ -0.32
CAPN1-204ENST00000526468 CACNA1AO00555 2505 aa13.07□□□□□ -0.32
CAPN1-204ENST00000526468 CLUHO75153 1309 aa13.07□□□□□ -0.32
CAPN1-204ENST00000526468 RALGAPA1Q6GYQ0 2036 aa13.06□□□□□ -0.32
CAPN1-204ENST00000526468 ZNF292O60281 2723 aa13.06□□□□□ -0.32
CAPN1-204ENST00000526468 TICRRQ7Z2Z1 1910 aa13.06□□□□□ -0.32
CAPN1-204ENST00000526468 PRR23AA6NEV1 266 aa13.06□□□□□ -0.32
CAPN1-204ENST00000526468 INO80B-WBP1J3KQ70 363 aa13.06□□□□□ -0.32
CAPN1-204ENST00000526468 NRP1O14786 923 aa13.06□□□□□ -0.32
CAPN1-204ENST00000526468 TSPAN1O60635 241 aa13.06□□□□□ -0.32
CAPN1-204ENST00000526468 GLUD1P00367 558 aa13.06□□□□□ -0.32
CAPN1-204ENST00000526468 MYBP10242 640 aa13.06□□□□□ -0.32
CAPN1-204ENST00000526468 NCLP19338 710 aaKnown RBP13.06□□□□□ -0.32
CAPN1-204ENST00000526468 GBP2P32456 591 aaPredicted RBP13.06□□□□□ -0.32
CAPN1-204ENST00000526468 CTTNQ14247 550 aaKnown RBP13.06□□□□□ -0.32
CAPN1-204ENST00000526468 PPP4R3AQ6IN85 833 aa13.06□□□□□ -0.32
CAPN1-204ENST00000526468 NOTUMQ6P988 496 aa13.06□□□□□ -0.32
CAPN1-204ENST00000526468 MRPL10Q7Z7H8 261 aaKnown RBP13.06□□□□□ -0.32
CAPN1-204ENST00000526468 ANP32BQ92688 251 aaKnown RBP13.06□□□□□ -0.32
CAPN1-204ENST00000526468 DYDC2Q96IM9 177 aa13.06□□□□□ -0.32
CAPN1-204ENST00000526468 CPB2Q96IY4 423 aa13.06□□□□□ -0.32
CAPN1-204ENST00000526468 TBC1D32Q96NH3 1257 aa13.06□□□□□ -0.32
CAPN1-204ENST00000526468 GAD1Q99259 594 aa13.06□□□□□ -0.32
CAPN1-204ENST00000526468 NAP1L4Q99733 375 aaKnown RBP13.06□□□□□ -0.32
CAPN1-204ENST00000526468 EIF2AQ9BY44 585 aaKnown RBP13.06□□□□□ -0.32
CAPN1-204ENST00000526468 TRIM6Q9C030 488 aaPredicted RBP13.06□□□□□ -0.32
CAPN1-204ENST00000526468 PDRG1Q9NUG6 133 aa13.06□□□□□ -0.32
CAPN1-204ENST00000526468 RGL1Q9NZL6 768 aa13.06□□□□□ -0.32
CAPN1-204ENST00000526468 DUSP12Q9UNI6 340 aa13.06□□□□□ -0.32
CAPN1-204ENST00000526468 IPPQ9Y573 584 aa13.06□□□□□ -0.32
CAPN1-204ENST00000526468 COL4A3Q01955 1670 aa13.05□□□□□ -0.32
CAPN1-204ENST00000526468 FAM205CA6NFA0 338 aa13.05□□□□□ -0.32
CAPN1-204ENST00000526468 TBX3O15119 743 aa13.05□□□□□ -0.32
CAPN1-204ENST00000526468 INPPL1O15357 1258 aa13.05□□□□□ -0.32
CAPN1-204ENST00000526468 DTNBO60941 627 aa13.05□□□□□ -0.32
CAPN1-204ENST00000526468 HOXA11P31270 313 aaPredicted RBP13.05□□□□□ -0.32
CAPN1-204ENST00000526468 SCNN1GP51170 649 aa13.05□□□□□ -0.32
CAPN1-204ENST00000526468 SCRN1Q12765 414 aa13.05□□□□□ -0.32
CAPN1-204ENST00000526468 TDGQ13569 410 aa13.05□□□□□ -0.32
CAPN1-204ENST00000526468 TFDP1Q14186 410 aa13.05□□□□□ -0.32
CAPN1-204ENST00000526468 EPHA7Q15375 998 aa13.05□□□□□ -0.32
CAPN1-204ENST00000526468 C15orf39Q6ZRI6 1047 aa13.05□□□□□ -0.32
CAPN1-204ENST00000526468 OTUD6AQ7L8S5 288 aa13.05□□□□□ -0.32
CAPN1-204ENST00000526468 ASCL5Q7RTU5 278 aa13.05□□□□□ -0.32
CAPN1-204ENST00000526468 FRMD5Q7Z6J6 570 aa13.05□□□□□ -0.32
CAPN1-204ENST00000526468 C4orf19Q8IY42 314 aa13.05□□□□□ -0.32
CAPN1-204ENST00000526468 SLFN12Q8IYM2 578 aa13.05□□□□□ -0.32
CAPN1-204ENST00000526468 SIX5Q8N196 739 aa13.05□□□□□ -0.32
CAPN1-204ENST00000526468 SMG8Q8ND04 991 aaKnown RBP13.05□□□□□ -0.32
CAPN1-204ENST00000526468 CNNM3Q8NE01 707 aa13.05□□□□□ -0.32
CAPN1-204ENST00000526468 OXER1Q8TDS5 423 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms