RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 KNG1P01042 644 aa5.67□□□□□ -1.5
USP48-211ENST00000526044 MMEP08473 750 aa5.67□□□□□ -1.5
USP48-211ENST00000526044 COL6A1P12109 1028 aa5.67□□□□□ -1.5
USP48-211ENST00000526044 GYS2P54840 703 aa5.67□□□□□ -1.5
USP48-211ENST00000526044 TEFQ10587 303 aa5.67□□□□□ -1.5
USP48-211ENST00000526044 TAF7Q15545 349 aaPredicted RBP5.67□□□□□ -1.5
USP48-211ENST00000526044 TM4SF20Q53R12 229 aa5.67□□□□□ -1.5
USP48-211ENST00000526044 KRT27Q7Z3Y8 459 aa5.67□□□□□ -1.5
USP48-211ENST00000526044 FRMD5Q7Z6J6 570 aa5.67□□□□□ -1.5
USP48-211ENST00000526044 PPM1KQ8N3J5 372 aa5.67□□□□□ -1.5
USP48-211ENST00000526044 ASB15Q8WXK1 588 aa5.67□□□□□ -1.5
USP48-211ENST00000526044 ZCCHC14Q8WYQ9 949 aaKnown RBP5.67□□□□□ -1.5
USP48-211ENST00000526044 GBP4Q96PP9 640 aa5.67□□□□□ -1.5
USP48-211ENST00000526044 TACO1Q9BSH4 297 aaKnown RBP5.67□□□□□ -1.5
USP48-211ENST00000526044 MTFR1LQ9H019 292 aa5.67□□□□□ -1.5
USP48-211ENST00000526044 SLKQ9H2G2 1235 aaPredicted RBP5.67□□□□□ -1.5
USP48-211ENST00000526044 INCENPQ9NQS7 918 aa5.67□□□□□ -1.5
USP48-211ENST00000526044 ACSS2Q9NR19 701 aa5.67□□□□□ -1.5
USP48-211ENST00000526044 IFT57Q9NWB7 429 aa5.67□□□□□ -1.5
USP48-211ENST00000526044 ZKSCAN5Q9Y2L8 839 aa5.67□□□□□ -1.5
USP48-211ENST00000526044 LAS1LQ9Y4W2 734 aaKnown RBP5.67□□□□□ -1.5
USP48-211ENST00000526044 GLI3P10071 1580 aa5.67□□□□□ -1.5
USP48-211ENST00000526044 WNK3Q9BYP7 1800 aa5.67□□□□□ -1.5
USP48-211ENST00000526044 MAP3K5Q99683 1374 aa5.67□□□□□ -1.5
USP48-211ENST00000526044 PKD1L3Q7Z443 1732 aa5.66□□□□□ -1.5
USP48-211ENST00000526044 KPNA6O60684 536 aa5.66□□□□□ -1.5
USP48-211ENST00000526044 KIF11P52732 1056 aa5.66□□□□□ -1.5
USP48-211ENST00000526044 GNAI1P63096 354 aa5.66□□□□□ -1.5
USP48-211ENST00000526044 PLP2Q04941 152 aa5.66□□□□□ -1.5
USP48-211ENST00000526044 ZNF174Q15697 407 aa5.66□□□□□ -1.5
USP48-211ENST00000526044 HIPK4Q8NE63 616 aa5.66□□□□□ -1.5
USP48-211ENST00000526044 WDR48Q8TAF3 677 aa5.66□□□□□ -1.5
USP48-211ENST00000526044 THUMPD2Q9BTF0 503 aaKnown RBP5.66□□□□□ -1.5
USP48-211ENST00000526044 TARS2Q9BW92 718 aaKnown RBP5.66□□□□□ -1.5
USP48-211ENST00000526044 UCKL1Q9NWZ5 548 aa5.66□□□□□ -1.5
USP48-211ENST00000526044 ASB1Q9Y576 335 aa5.66□□□□□ -1.5
USP48-211ENST00000526044 VIRMAQ69YN4 1812 aaKnown RBP5.66□□□□□ -1.5
USP48-211ENST00000526044 IL16Q14005 1332 aa5.66□□□□□ -1.5
USP48-211ENST00000526044 ZBED9Q6R2W3 1325 aa5.66□□□□□ -1.5
USP48-211ENST00000526044 PRAMEF22A3QJZ6 481 aa5.65□□□□□ -1.5
USP48-211ENST00000526044 RASSF10A6NK89 507 aa5.65□□□□□ -1.5
USP48-211ENST00000526044 H0Y858 1186 aa5.65□□□□□ -1.5
USP48-211ENST00000526044 GOLGA6L22H0YM25 854 aa5.65□□□□□ -1.5
USP48-211ENST00000526044 GAS7O60861 476 aa5.65□□□□□ -1.5
USP48-211ENST00000526044 KLHL18O94889 574 aa5.65□□□□□ -1.5
USP48-211ENST00000526044 F2P00734 622 aa5.65□□□□□ -1.5
USP48-211ENST00000526044 CYP17A1P05093 508 aa5.65□□□□□ -1.5
USP48-211ENST00000526044 SLFN5Q08AF3 891 aa5.65□□□□□ -1.5
USP48-211ENST00000526044 PCBP1Q15365 356 aaKnown RBP eCLIP5.65□□□□□ -1.5
USP48-211ENST00000526044 CATSPEREQ5SY80 951 aa5.65□□□□□ -1.5
USP48-211ENST00000526044 BORAQ6PGQ7 559 aa5.65□□□□□ -1.5
USP48-211ENST00000526044 CXXC5Q7LFL8 322 aaKnown RBP5.65□□□□□ -1.5
USP48-211ENST00000526044 KLHL36Q8N4N3 616 aa5.65□□□□□ -1.5
USP48-211ENST00000526044 TEPSINQ96N21 525 aa5.65□□□□□ -1.5
USP48-211ENST00000526044 BTBD2Q9BX70 525 aa5.65□□□□□ -1.5
USP48-211ENST00000526044 PCIF1Q9H4Z3 704 aa5.65□□□□□ -1.5
USP48-211ENST00000526044 MYH16Q9H6N6 1097 aa5.65□□□□□ -1.5
USP48-211ENST00000526044 BARX1Q9HBU1 254 aaPredicted RBP5.65□□□□□ -1.5
USP48-211ENST00000526044 BABAM1Q9NWV8 329 aa5.65□□□□□ -1.5
USP48-211ENST00000526044 MIS18AQ9NYP9 233 aa5.65□□□□□ -1.5
USP48-211ENST00000526044 SCN11AQ9UI33 1791 aa5.65□□□□□ -1.51
USP48-211ENST00000526044 TNS2Q63HR2 1409 aa5.65□□□□□ -1.51
USP48-211ENST00000526044 BRWD3Q6RI45 1802 aa5.64□□□□□ -1.51
USP48-211ENST00000526044 CHL1O00533 1208 aa5.64□□□□□ -1.51
USP48-211ENST00000526044 DVL2O14641 736 aa5.64□□□□□ -1.51
USP48-211ENST00000526044 MPIG6BO95866 241 aa5.64□□□□□ -1.51
USP48-211ENST00000526044 ZNF853P0CG23 659 aa5.64□□□□□ -1.51
USP48-211ENST00000526044 MYCLP1P12525 358 aaPredicted RBP5.64□□□□□ -1.51
USP48-211ENST00000526044 MC4RP32245 332 aa5.64□□□□□ -1.51
USP48-211ENST00000526044 ECE1P42892 770 aa5.64□□□□□ -1.51
USP48-211ENST00000526044 FNTBP49356 437 aa5.64□□□□□ -1.51
USP48-211ENST00000526044 KRTAP10-2P60368 255 aa5.64□□□□□ -1.51
USP48-211ENST00000526044 NFATC3Q12968 1075 aa5.64□□□□□ -1.51
USP48-211ENST00000526044 ZFYVE27Q5T4F4 411 aa5.64□□□□□ -1.51
USP48-211ENST00000526044 TRMT2AQ8IZ69 625 aaKnown RBP5.64□□□□□ -1.51
USP48-211ENST00000526044 LGI4Q8N135 537 aa5.64□□□□□ -1.51
USP48-211ENST00000526044 KIAA1958Q8N8K9 716 aa5.64□□□□□ -1.51
USP48-211ENST00000526044 NUDT10Q8NFP7 164 aa5.64□□□□□ -1.51
USP48-211ENST00000526044 CALML6Q8TD86 181 aa5.64□□□□□ -1.51
USP48-211ENST00000526044 ERCC4Q92889 916 aaPredicted RBP5.64□□□□□ -1.51
USP48-211ENST00000526044 E2F7Q96AV8 911 aa5.64□□□□□ -1.51
USP48-211ENST00000526044 NUDT11Q96G61 164 aa5.64□□□□□ -1.51
USP48-211ENST00000526044 AMNQ9BXJ7 453 aa5.64□□□□□ -1.51
USP48-211ENST00000526044 TMOD3Q9NYL9 352 aa5.64□□□□□ -1.51
USP48-211ENST00000526044 TSPYL4Q9UJ04 414 aa5.64□□□□□ -1.51
USP48-211ENST00000526044 SHANK3Q9BYB0 1731 aa5.64□□□□□ -1.51
USP48-211ENST00000526044 ZNF521Q96K83 1311 aa5.64□□□□□ -1.51
USP48-211ENST00000526044 CEMIPQ8WUJ3 1361 aa5.64□□□□□ -1.51
USP48-211ENST00000526044 THSD7AQ9UPZ6 1657 aa5.63□□□□□ -1.51
USP48-211ENST00000526044 ITGB4P16144 1822 aa5.63□□□□□ -1.51
USP48-211ENST00000526044 A0A087X0B3 334 aa5.63□□□□□ -1.51
USP48-211ENST00000526044 ATP2A2P16615 1042 aaKnown RBP5.63□□□□□ -1.51
USP48-211ENST00000526044 SCNN1BP51168 640 aa5.63□□□□□ -1.51
USP48-211ENST00000526044 DSG1Q02413 1049 aa5.63□□□□□ -1.51
USP48-211ENST00000526044 SART3Q15020 963 aaKnown RBP5.63□□□□□ -1.51
USP48-211ENST00000526044 STILQ15468 1287 aa5.63□□□□□ -1.51
USP48-211ENST00000526044 WDR72Q3MJ13 1102 aa5.63□□□□□ -1.51
USP48-211ENST00000526044 Q6ZUG5 572 aa5.63□□□□□ -1.51
USP48-211ENST00000526044 TTC5Q8N0Z6 440 aa5.63□□□□□ -1.51
USP48-211ENST00000526044 NXPE1Q8N323 547 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms