RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 USP18Q9UMW8 372 aa6.08□□□□□ -1.44
CSDE1-210ENST00000525878 NUMBLQ9Y6R0 609 aa6.08□□□□□ -1.44
CSDE1-210ENST00000525878 PRSS38A1L453 326 aa6.07□□□□□ -1.44
CSDE1-210ENST00000525878 NRP2O60462 931 aa6.07□□□□□ -1.44
CSDE1-210ENST00000525878 LPXNO60711 386 aa6.07□□□□□ -1.44
CSDE1-210ENST00000525878 NUDT3O95989 172 aa6.07□□□□□ -1.44
CSDE1-210ENST00000525878 ZEB1P37275 1124 aaPredicted RBP6.07□□□□□ -1.44
CSDE1-210ENST00000525878 DUSP2Q05923 314 aa6.07□□□□□ -1.44
CSDE1-210ENST00000525878 TCEA2Q15560 299 aa6.07□□□□□ -1.44
CSDE1-210ENST00000525878 Q6YL49 198 aa6.07□□□□□ -1.44
CSDE1-210ENST00000525878 LRRTM3Q86VH5 581 aa6.07□□□□□ -1.44
CSDE1-210ENST00000525878 SLC41A1Q8IVJ1 513 aa6.07□□□□□ -1.44
CSDE1-210ENST00000525878 ARHGEF19Q8IW93 802 aa6.07□□□□□ -1.44
CSDE1-210ENST00000525878 SMC1BQ8NDV3 1235 aa6.07□□□□□ -1.44
CSDE1-210ENST00000525878 SREK1Q8WXA9 508 aaKnown RBP6.07□□□□□ -1.44
CSDE1-210ENST00000525878 FERMT2Q96AC1 680 aa6.07□□□□□ -1.44
CSDE1-210ENST00000525878 CD2APQ9Y5K6 639 aa6.07□□□□□ -1.44
CSDE1-210ENST00000525878 ST20-MTHFSA0A0A6YYL1 179 aa6.06□□□□□ -1.44
CSDE1-210ENST00000525878 GAGE12BA1L429 117 aa6.06□□□□□ -1.44
CSDE1-210ENST00000525878 GAGE12HA6NDE8 117 aa6.06□□□□□ -1.44
CSDE1-210ENST00000525878 LEFTY2O00292 366 aa6.06□□□□□ -1.44
CSDE1-210ENST00000525878 CCDC142Q17RM4 750 aa6.06□□□□□ -1.44
CSDE1-210ENST00000525878 DRICH1Q6PGQ1 229 aaPredicted RBP6.06□□□□□ -1.44
CSDE1-210ENST00000525878 OLFML1Q6UWY5 402 aa6.06□□□□□ -1.44
CSDE1-210ENST00000525878 BTNL9Q6UXG8 535 aa6.06□□□□□ -1.44
CSDE1-210ENST00000525878 GDF7Q7Z4P5 450 aa6.06□□□□□ -1.44
CSDE1-210ENST00000525878 SYT12Q8IV01 421 aa6.06□□□□□ -1.44
CSDE1-210ENST00000525878 ZNF764Q96H86 408 aaPredicted RBP6.06□□□□□ -1.44
CSDE1-210ENST00000525878 FAM193BQ96PV7 902 aaPredicted RBP6.06□□□□□ -1.44
CSDE1-210ENST00000525878 EPC1Q9H2F5 836 aa6.06□□□□□ -1.44
CSDE1-210ENST00000525878 SERHL2Q9H4I8 314 aa6.06□□□□□ -1.44
CSDE1-210ENST00000525878 ZSWIM4Q9H7M6 989 aa6.06□□□□□ -1.44
CSDE1-210ENST00000525878 SYBUQ9NX95 663 aa6.06□□□□□ -1.44
CSDE1-210ENST00000525878 CLCA2Q9UQC9 943 aa6.06□□□□□ -1.44
CSDE1-210ENST00000525878 LCHNA4D1U4 455 aa6.05□□□□□ -1.44
CSDE1-210ENST00000525878 ZAR1LA6NP61 321 aa6.05□□□□□ -1.44
CSDE1-210ENST00000525878 ZSCAN20P17040 1043 aaPredicted RBP6.05□□□□□ -1.44
CSDE1-210ENST00000525878 NEK4P51957 841 aa6.05□□□□□ -1.44
CSDE1-210ENST00000525878 KPNA1P52294 538 aaPredicted RBP6.05□□□□□ -1.44
CSDE1-210ENST00000525878 HNRNPA0Q13151 305 aaKnown RBP6.05□□□□□ -1.44
CSDE1-210ENST00000525878 UBE3CQ15386 1083 aa6.05□□□□□ -1.44
CSDE1-210ENST00000525878 TERF2Q15554 542 aa6.05□□□□□ -1.44
CSDE1-210ENST00000525878 BEAN1Q3B7T3 259 aa6.05□□□□□ -1.44
CSDE1-210ENST00000525878 XYLT1Q86Y38 959 aa6.05□□□□□ -1.44
CSDE1-210ENST00000525878 RSAD2Q8WXG1 361 aa6.05□□□□□ -1.44
CSDE1-210ENST00000525878 NINJ1Q92982 152 aa6.05□□□□□ -1.44
CSDE1-210ENST00000525878 RNPC3Q96LT9 517 aaKnown RBP6.05□□□□□ -1.44
CSDE1-210ENST00000525878 BBC3Q96PG8 261 aaPredicted RBP6.05□□□□□ -1.44
CSDE1-210ENST00000525878 WNT8AQ9H1J5 351 aa6.05□□□□□ -1.44
CSDE1-210ENST00000525878 MS4A5Q9H3V2 200 aa6.05□□□□□ -1.44
CSDE1-210ENST00000525878 AKIP1Q9NQ31 210 aa6.05□□□□□ -1.44
CSDE1-210ENST00000525878 ZNHIT2Q9UHR6 403 aa6.05□□□□□ -1.44
CSDE1-210ENST00000525878 EVLQ9UI08 416 aaPredicted RBP6.05□□□□□ -1.44
CSDE1-210ENST00000525878 PRSS50Q9UI38 385 aa6.05□□□□□ -1.44
CSDE1-210ENST00000525878 DIRC3C9JPN6 131 aa6.04□□□□□ -1.44
CSDE1-210ENST00000525878 RNASET2O00584 256 aaKnown RBP6.04□□□□□ -1.44
CSDE1-210ENST00000525878 NCR1O76036 304 aa6.04□□□□□ -1.44
CSDE1-210ENST00000525878 XPAP23025 273 aaPredicted RBP6.04□□□□□ -1.44
CSDE1-210ENST00000525878 LSP1P33241 339 aa6.04□□□□□ -1.44
CSDE1-210ENST00000525878 BMPR1AP36894 532 aa6.04□□□□□ -1.44
CSDE1-210ENST00000525878 MGAT5Q09328 741 aa6.04□□□□□ -1.44
CSDE1-210ENST00000525878 PCBP1Q15365 356 aaKnown RBP eCLIP6.04□□□□□ -1.44
CSDE1-210ENST00000525878 SEPT7Q16181 437 aaKnown RBP6.04□□□□□ -1.44
CSDE1-210ENST00000525878 LMBR1LQ6UX01 489 aa6.04□□□□□ -1.44
CSDE1-210ENST00000525878 RIOX1Q9H6W3 641 aa6.04□□□□□ -1.44
CSDE1-210ENST00000525878 CYP4F11Q9HBI6 524 aa6.04□□□□□ -1.44
CSDE1-210ENST00000525878 SPTLC3Q9NUV7 552 aa6.04□□□□□ -1.44
CSDE1-210ENST00000525878 TRPM5Q9NZQ8 1165 aa6.04□□□□□ -1.44
CSDE1-210ENST00000525878 HDAC5Q9UQL6 1122 aa6.04□□□□□ -1.44
CSDE1-210ENST00000525878 PPP2R3BQ9Y5P8 575 aa6.04□□□□□ -1.44
CSDE1-210ENST00000525878 LTA4HP09960 611 aaKnown RBP6.03□□□□□ -1.44
CSDE1-210ENST00000525878 CLK3P49761 638 aaKnown RBP6.03□□□□□ -1.44
CSDE1-210ENST00000525878 MANFP55145 182 aaKnown RBP6.03□□□□□ -1.44
CSDE1-210ENST00000525878 NRG3P56975 720 aa6.03□□□□□ -1.44
CSDE1-210ENST00000525878 TKFCQ3LXA3 575 aa6.03□□□□□ -1.44
CSDE1-210ENST00000525878 C19orf54Q5BKX5 351 aa6.03□□□□□ -1.44
CSDE1-210ENST00000525878 CCDC62Q6P9F0 684 aa6.03□□□□□ -1.44
CSDE1-210ENST00000525878 GLB1L2Q8IW92 636 aa6.03□□□□□ -1.44
CSDE1-210ENST00000525878 WDR11Q9BZH6 1224 aa6.03□□□□□ -1.44
CSDE1-210ENST00000525878 ANKFY1Q9P2R3 1169 aa6.03□□□□□ -1.44
CSDE1-210ENST00000525878 PRR5-ARHGAP8B1AHC4 643 aa6.02□□□□□ -1.45
CSDE1-210ENST00000525878 TMEM127O75204 238 aa6.02□□□□□ -1.45
CSDE1-210ENST00000525878 HSP90B1P14625 803 aaKnown RBP6.02□□□□□ -1.45
CSDE1-210ENST00000525878 LSSP48449 732 aa6.02□□□□□ -1.45
CSDE1-210ENST00000525878 MEF2AQ02078 507 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-210ENST00000525878 APBA1Q02410 837 aa6.02□□□□□ -1.45
CSDE1-210ENST00000525878 NHLH2Q02577 135 aa6.02□□□□□ -1.45
CSDE1-210ENST00000525878 C21orf62-AS1Q17RA5 79 aa6.02□□□□□ -1.45
CSDE1-210ENST00000525878 CCDC144BQ3MJ40 725 aa6.02□□□□□ -1.45
CSDE1-210ENST00000525878 ANKS6Q68DC2 871 aa6.02□□□□□ -1.45
CSDE1-210ENST00000525878 C16orf86Q6ZW13 317 aa6.02□□□□□ -1.45
CSDE1-210ENST00000525878 PLXDC1Q8IUK5 500 aa6.02□□□□□ -1.45
CSDE1-210ENST00000525878 LINC00476Q8WZB0 136 aa6.02□□□□□ -1.45
CSDE1-210ENST00000525878 COQ10AQ96MF6 247 aa6.02□□□□□ -1.45
CSDE1-210ENST00000525878 PTGFRNQ9P2B2 879 aa6.02□□□□□ -1.45
CSDE1-210ENST00000525878 EPN1Q9Y6I3 576 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-210ENST00000525878 ZMYM3Q14202 1370 aa6.02□□□□□ -1.45
CSDE1-210ENST00000525878 MARCH11A6NNE9 402 aa6.01□□□□□ -1.45
CSDE1-210ENST00000525878 TYRP1P17643 537 aa6.01□□□□□ -1.45
CSDE1-210ENST00000525878 IL12RB1P42701 662 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms