RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 CCDC113Q9H0I3 377 aa19.33■□□□□ 0.68
NR1H3-228ENST00000525441 GBP3Q9H0R5 595 aa19.33■□□□□ 0.68
NR1H3-228ENST00000525441 NRDE2Q9H7Z3 1164 aa19.33■□□□□ 0.68
NR1H3-228ENST00000525441 TLE6Q9H808 572 aa19.33■□□□□ 0.68
NR1H3-228ENST00000525441 C17orf75Q9HAS0 396 aa19.33■□□□□ 0.68
NR1H3-228ENST00000525441 POLD4Q9HCU8 107 aa19.33■□□□□ 0.68
NR1H3-228ENST00000525441 ENTPD7Q9NQZ7 604 aa19.33■□□□□ 0.68
NR1H3-228ENST00000525441 KCNG1Q9UIX4 513 aa19.33■□□□□ 0.68
NR1H3-228ENST00000525441 GIT1Q9Y2X7 761 aa19.33■□□□□ 0.68
NR1H3-228ENST00000525441 CCDC169A6NNP5 214 aa19.32■□□□□ 0.68
NR1H3-228ENST00000525441 FSCN2O14926 492 aa19.32■□□□□ 0.68
NR1H3-228ENST00000525441 PLA2G4BP0C869 781 aa19.32■□□□□ 0.68
NR1H3-228ENST00000525441 PDIA4P13667 645 aaKnown RBP19.32■□□□□ 0.68
NR1H3-228ENST00000525441 ERVFC1P60507 584 aa19.32■□□□□ 0.68
NR1H3-228ENST00000525441 CTC1Q2NKJ3 1217 aa19.32■□□□□ 0.68
NR1H3-228ENST00000525441 APBB1IPQ7Z5R6 666 aaPredicted RBP19.32■□□□□ 0.68
NR1H3-228ENST00000525441 CDCA3Q99618 268 aaPredicted RBP19.32■□□□□ 0.68
NR1H3-228ENST00000525441 TCF25Q9BQ70 676 aa19.32■□□□□ 0.68
NR1H3-228ENST00000525441 TMEM175Q9BSA9 504 aa19.32■□□□□ 0.68
NR1H3-228ENST00000525441 APOL6Q9BWW8 343 aa19.32■□□□□ 0.68
NR1H3-228ENST00000525441 NXF3Q9H4D5 531 aaKnown RBP19.32■□□□□ 0.68
NR1H3-228ENST00000525441 FAM50BQ9Y247 325 aa19.32■□□□□ 0.68
NR1H3-228ENST00000525441 HES2Q9Y543 173 aa19.32■□□□□ 0.68
NR1H3-228ENST00000525441 CLIC4Q9Y696 253 aa19.32■□□□□ 0.68
NR1H3-228ENST00000525441 NCOR1O75376 2440 aa19.32■□□□□ 0.68
NR1H3-228ENST00000525441 ZMYM2Q9UBW7 1377 aa19.32■□□□□ 0.68
NR1H3-228ENST00000525441 PLXNA4Q9HCM2 1894 aa19.31■□□□□ 0.68
NR1H3-228ENST00000525441 ARL5CA6NH57 179 aa19.31■□□□□ 0.68
NR1H3-228ENST00000525441 NT5C1B-RDH14C9J2C7 533 aa19.31■□□□□ 0.68
NR1H3-228ENST00000525441 K7ERI5 159 aa19.31■□□□□ 0.68
NR1H3-228ENST00000525441 INPPL1O15357 1258 aa19.31■□□□□ 0.68
NR1H3-228ENST00000525441 POMCP01189 267 aa19.31■□□□□ 0.68
NR1H3-228ENST00000525441 GALTP07902 379 aa19.31■□□□□ 0.68
NR1H3-228ENST00000525441 NPTX2P47972 431 aa19.31■□□□□ 0.68
NR1H3-228ENST00000525441 NRIP1P48552 1158 aa19.31■□□□□ 0.68
NR1H3-228ENST00000525441 PEX3P56589 373 aa19.31■□□□□ 0.68
NR1H3-228ENST00000525441 PLPP4Q5VZY2 271 aa19.31■□□□□ 0.68
NR1H3-228ENST00000525441 TMC7Q7Z402 723 aa19.31■□□□□ 0.68
NR1H3-228ENST00000525441 ADGRD2Q7Z7M1 963 aa19.31■□□□□ 0.68
NR1H3-228ENST00000525441 CDR2LQ86X02 465 aaPredicted RBP19.31■□□□□ 0.68
NR1H3-228ENST00000525441 EFHBQ8N7U6 833 aa19.31■□□□□ 0.68
NR1H3-228ENST00000525441 GAD1Q99259 594 aa19.31■□□□□ 0.68
NR1H3-228ENST00000525441 KIFC3Q9BVG8 833 aa19.31■□□□□ 0.68
NR1H3-228ENST00000525441 RNF39Q9H2S5 420 aa19.31■□□□□ 0.68
NR1H3-228ENST00000525441 PDZD7Q9H5P4 517 aa19.31■□□□□ 0.68
NR1H3-228ENST00000525441 KMT5AQ9NQR1 393 aa19.31■□□□□ 0.68
NR1H3-228ENST00000525441 STK39Q9UEW8 545 aa19.31■□□□□ 0.68
NR1H3-228ENST00000525441 RBM19Q9Y4C8 960 aaKnown RBP19.31■□□□□ 0.68
NR1H3-228ENST00000525441 REV3LO60673 3130 aa19.31■□□□□ 0.68
NR1H3-228ENST00000525441 ATG2AQ2TAZ0 1938 aa19.3■□□□□ 0.68
NR1H3-228ENST00000525441 H3BQ06 376 aaPredicted RBP19.3■□□□□ 0.68
NR1H3-228ENST00000525441 ALDH2P05091 517 aa19.3■□□□□ 0.68
NR1H3-228ENST00000525441 MLH1P40692 756 aa19.3■□□□□ 0.68
NR1H3-228ENST00000525441 SLC11A1P49279 550 aa19.3■□□□□ 0.68
NR1H3-228ENST00000525441 NDUFV1P49821 464 aa19.3■□□□□ 0.68
NR1H3-228ENST00000525441 SLC12A3P55017 1021 aa19.3■□□□□ 0.68
NR1H3-228ENST00000525441 ADAM15Q13444 863 aa19.3■□□□□ 0.68
NR1H3-228ENST00000525441 SMC1AQ14683 1233 aaKnown RBP19.3■□□□□ 0.68
NR1H3-228ENST00000525441 PTPAQ15257 358 aa19.3■□□□□ 0.68
NR1H3-228ENST00000525441 DCAF4L1Q3SXM0 396 aa19.3■□□□□ 0.68
NR1H3-228ENST00000525441 PTCRAQ6ISU1 281 aaPredicted RBP19.3■□□□□ 0.68
NR1H3-228ENST00000525441 RBM23Q86U06 439 aaKnown RBP19.3■□□□□ 0.68
NR1H3-228ENST00000525441 ZNF280BQ86YH2 543 aa19.3■□□□□ 0.68
NR1H3-228ENST00000525441 DAW1Q8N136 415 aa19.3■□□□□ 0.68
NR1H3-228ENST00000525441 IGSF21Q96ID5 467 aa19.3■□□□□ 0.68
NR1H3-228ENST00000525441 TMEM134Q9H6X4 195 aa19.3■□□□□ 0.68
NR1H3-228ENST00000525441 PARP2Q9UGN5 583 aa19.3■□□□□ 0.68
NR1H3-228ENST00000525441 PCDHGC5Q9Y5F6 944 aa19.3■□□□□ 0.68
NR1H3-228ENST00000525441 NR1I2O75469 434 aa19.29■□□□□ 0.68
NR1H3-228ENST00000525441 MARCKSP29966 332 aaPredicted RBP19.29■□□□□ 0.68
NR1H3-228ENST00000525441 GTF2F1P35269 517 aaKnown RBP eCLIP19.29■□□□□ 0.68
NR1H3-228ENST00000525441 AFF1P51825 1210 aaKnown RBP19.29■□□□□ 0.68
NR1H3-228ENST00000525441 SMTNP53814 917 aa19.29■□□□□ 0.68
NR1H3-228ENST00000525441 GRIN1Q05586 938 aa19.29■□□□□ 0.68
NR1H3-228ENST00000525441 MAPK7Q13164 816 aa19.29■□□□□ 0.68
NR1H3-228ENST00000525441 ATF7IP2Q5U623 682 aa19.29■□□□□ 0.68
NR1H3-228ENST00000525441 FAM173BQ6P4H8 233 aa19.29■□□□□ 0.68
NR1H3-228ENST00000525441 DDX53Q86TM3 631 aaKnown RBP19.29■□□□□ 0.68
NR1H3-228ENST00000525441 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.29■□□□□ 0.68
NR1H3-228ENST00000525441 RPS6KC1Q96S38 1066 aa19.29■□□□□ 0.68
NR1H3-228ENST00000525441 CCSER1Q9C0I3 900 aa19.29■□□□□ 0.68
NR1H3-228ENST00000525441 DNAJB4Q9UDY4 337 aa19.29■□□□□ 0.68
NR1H3-228ENST00000525441 FAN1Q9Y2M0 1017 aa19.29■□□□□ 0.68
NR1H3-228ENST00000525441 SRPRBQ9Y5M8 271 aaKnown RBP19.29■□□□□ 0.68
NR1H3-228ENST00000525441 TTLL13PA6NNM8 815 aa19.28■□□□□ 0.68
NR1H3-228ENST00000525441 TNFRSF10AO00220 468 aa19.28■□□□□ 0.68
NR1H3-228ENST00000525441 DDHD2O94830 711 aa19.28■□□□□ 0.68
NR1H3-228ENST00000525441 SRGAP2BP0DMP2 458 aa19.28■□□□□ 0.68
NR1H3-228ENST00000525441 PLS3P13797 630 aa19.28■□□□□ 0.68
NR1H3-228ENST00000525441 AKAP5P24588 427 aa19.28■□□□□ 0.68
NR1H3-228ENST00000525441 LTBRP36941 435 aa19.28■□□□□ 0.68
NR1H3-228ENST00000525441 TXLNAP40222 546 aa19.28■□□□□ 0.68
NR1H3-228ENST00000525441 SCNN1GP51170 649 aa19.28■□□□□ 0.68
NR1H3-228ENST00000525441 CEBPZQ03701 1054 aaKnown RBP19.28■□□□□ 0.68
NR1H3-228ENST00000525441 RAD51AP2Q09MP3 1159 aa19.28■□□□□ 0.68
NR1H3-228ENST00000525441 KARSQ15046 597 aaKnown RBP19.28■□□□□ 0.68
NR1H3-228ENST00000525441 DUSP6Q16828 381 aa19.28■□□□□ 0.68
NR1H3-228ENST00000525441 VPS52Q8N1B4 723 aa19.28■□□□□ 0.68
NR1H3-228ENST00000525441 SPIRE2Q8WWL2 714 aa19.28■□□□□ 0.68
NR1H3-228ENST00000525441 ZFP42Q96MM3 310 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms