RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 PRR13Q9NZ81 148 aa4.08□□□□□ -1.76
CSDE1-209ENST00000525132 SUCOQ9UBS9 1254 aaKnown RBP4.08□□□□□ -1.76
CSDE1-209ENST00000525132 ZMYM2Q9UBW7 1377 aa4.08□□□□□ -1.76
CSDE1-209ENST00000525132 TPX2Q9ULW0 747 aaKnown RBP4.08□□□□□ -1.76
CSDE1-209ENST00000525132 ICE1Q9Y2F5 2266 aa4.08□□□□□ -1.76
CSDE1-209ENST00000525132 VWFP04275 2813 aa4.08□□□□□ -1.76
CSDE1-209ENST00000525132 EDC4Q6P2E9 1401 aaKnown RBP4.07□□□□□ -1.76
CSDE1-209ENST00000525132 APCP25054 2843 aa4.07□□□□□ -1.76
CSDE1-209ENST00000525132 ABCC12Q96J65 1359 aa4.07□□□□□ -1.76
CSDE1-209ENST00000525132 TEX51A0A1B0GUA7 166 aa4.07□□□□□ -1.76
CSDE1-209ENST00000525132 A0A1W2PQH9 124 aa4.07□□□□□ -1.76
CSDE1-209ENST00000525132 C9IYK1 514 aa4.07□□□□□ -1.76
CSDE1-209ENST00000525132 CBFA2T2O43439 604 aa4.07□□□□□ -1.76
CSDE1-209ENST00000525132 MARCH6O60337 910 aa4.07□□□□□ -1.76
CSDE1-209ENST00000525132 FOXD2O60548 495 aaPredicted RBP4.07□□□□□ -1.76
CSDE1-209ENST00000525132 AFPP02771 609 aaKnown RBP4.07□□□□□ -1.76
CSDE1-209ENST00000525132 ASGR2P07307 311 aa4.07□□□□□ -1.76
CSDE1-209ENST00000525132 CYP7A1P22680 504 aa4.07□□□□□ -1.76
CSDE1-209ENST00000525132 MCM4P33991 863 aa4.07□□□□□ -1.76
CSDE1-209ENST00000525132 PMS1P54277 932 aaKnown RBP4.07□□□□□ -1.76
CSDE1-209ENST00000525132 CSTF1Q05048 431 aaKnown RBP4.07□□□□□ -1.76
CSDE1-209ENST00000525132 SNW1Q13573 536 aaKnown RBP4.07□□□□□ -1.76
CSDE1-209ENST00000525132 ANKRD39Q53RE8 183 aa4.07□□□□□ -1.76
CSDE1-209ENST00000525132 ZNF790Q6PG37 636 aa4.07□□□□□ -1.76
CSDE1-209ENST00000525132 UNC5AQ6ZN44 842 aa4.07□□□□□ -1.76
CSDE1-209ENST00000525132 TSPYL5Q86VY4 417 aaPredicted RBP4.07□□□□□ -1.76
CSDE1-209ENST00000525132 MCF2L2Q86YR7 1114 aa4.07□□□□□ -1.76
CSDE1-209ENST00000525132 PHACTR4Q8IZ21 702 aa4.07□□□□□ -1.76
CSDE1-209ENST00000525132 CHCHD4Q8N4Q1 142 aa4.07□□□□□ -1.76
CSDE1-209ENST00000525132 SMRP1Q8NCR6 262 aa4.07□□□□□ -1.76
CSDE1-209ENST00000525132 OR6P1Q8NGX9 317 aa4.07□□□□□ -1.76
CSDE1-209ENST00000525132 SYTL5Q8TDW5 730 aaPredicted RBP4.07□□□□□ -1.76
CSDE1-209ENST00000525132 ASB11Q8WXH4 323 aa4.07□□□□□ -1.76
CSDE1-209ENST00000525132 KLHL6Q8WZ60 621 aa4.07□□□□□ -1.76
CSDE1-209ENST00000525132 RBMXL1Q96E39 390 aaKnown RBP4.07□□□□□ -1.76
CSDE1-209ENST00000525132 ZNF496Q96IT1 587 aaPredicted RBP4.07□□□□□ -1.76
CSDE1-209ENST00000525132 SLC6A18Q96N87 628 aa4.07□□□□□ -1.76
CSDE1-209ENST00000525132 MXD3Q9BW11 206 aa4.07□□□□□ -1.76
CSDE1-209ENST00000525132 SRRTQ9BXP5 876 aaKnown RBP4.07□□□□□ -1.76
CSDE1-209ENST00000525132 OSBPL2Q9H1P3 480 aa4.07□□□□□ -1.76
CSDE1-209ENST00000525132 DLGAP2Q9P1A6 1054 aa4.07□□□□□ -1.76
CSDE1-209ENST00000525132 ZNF214Q9UL59 606 aaPredicted RBP4.07□□□□□ -1.76
CSDE1-209ENST00000525132 RAB23Q9ULC3 237 aa4.07□□□□□ -1.76
CSDE1-209ENST00000525132 APC2O95996 2303 aa4.07□□□□□ -1.76
CSDE1-209ENST00000525132 RYR1P21817 5038 aa4.07□□□□□ -1.76
CSDE1-209ENST00000525132 ACACAQ13085 2346 aa4.06□□□□□ -1.76
CSDE1-209ENST00000525132 UMODL1Q5DID0 1318 aa4.06□□□□□ -1.76
CSDE1-209ENST00000525132 H3BS24 57 aa4.06□□□□□ -1.76
CSDE1-209ENST00000525132 CLSTN1O94985 981 aa4.06□□□□□ -1.76
CSDE1-209ENST00000525132 CBX7O95931 251 aa4.06□□□□□ -1.76
CSDE1-209ENST00000525132 C8AP07357 584 aa4.06□□□□□ -1.76
CSDE1-209ENST00000525132 RNASE1P07998 156 aaKnown RBP4.06□□□□□ -1.76
CSDE1-209ENST00000525132 CEACAM1P13688 526 aa4.06□□□□□ -1.76
CSDE1-209ENST00000525132 DCTP40126 519 aa4.06□□□□□ -1.76
CSDE1-209ENST00000525132 CCL23P55773 120 aa4.06□□□□□ -1.76
CSDE1-209ENST00000525132 RNF4P78317 190 aa4.06□□□□□ -1.76
CSDE1-209ENST00000525132 IGBP1P78318 339 aa4.06□□□□□ -1.76
CSDE1-209ENST00000525132 ZNF792Q3KQV3 632 aa4.06□□□□□ -1.76
CSDE1-209ENST00000525132 NOL8Q76FK4 1167 aaKnown RBP4.06□□□□□ -1.76
CSDE1-209ENST00000525132 TAOK1Q7L7X3 1001 aa4.06□□□□□ -1.76
CSDE1-209ENST00000525132 TMPRSS7Q7RTY8 843 aa4.06□□□□□ -1.76
CSDE1-209ENST00000525132 GPR155Q7Z3F1 870 aa4.06□□□□□ -1.76
CSDE1-209ENST00000525132 TMCO2Q7Z6W1 182 aaPredicted RBP4.06□□□□□ -1.76
CSDE1-209ENST00000525132 TTC6Q86TZ1 520 aa4.06□□□□□ -1.76
CSDE1-209ENST00000525132 NME9Q86XW9 330 aa4.06□□□□□ -1.76
CSDE1-209ENST00000525132 FAM26EQ8N5C1 309 aa4.06□□□□□ -1.76
CSDE1-209ENST00000525132 AGBL5Q8NDL9 886 aa4.06□□□□□ -1.76
CSDE1-209ENST00000525132 TRPV1Q8NER1 839 aa4.06□□□□□ -1.76
CSDE1-209ENST00000525132 PHOSPHO2Q8TCD6 241 aa4.06□□□□□ -1.76
CSDE1-209ENST00000525132 G6PC3Q9BUM1 346 aa4.06□□□□□ -1.76
CSDE1-209ENST00000525132 ZSCAN32Q9NX65 697 aa4.06□□□□□ -1.76
CSDE1-209ENST00000525132 CLEC1BQ9P126 229 aa4.06□□□□□ -1.76
CSDE1-209ENST00000525132 SUSD2Q9UGT4 822 aa4.06□□□□□ -1.76
CSDE1-209ENST00000525132 PPP2R3BQ9Y5P8 575 aa4.06□□□□□ -1.76
CSDE1-209ENST00000525132 MYO16Q9Y6X6 1858 aa4.06□□□□□ -1.76
CSDE1-209ENST00000525132 CACNA1IQ9P0X4 2223 aa4.06□□□□□ -1.76
CSDE1-209ENST00000525132 SHISA7A6NL88 538 aa4.05□□□□□ -1.76
CSDE1-209ENST00000525132 PAPLNO95428 1278 aa4.05□□□□□ -1.76
CSDE1-209ENST00000525132 CTSKP43235 329 aa4.05□□□□□ -1.76
CSDE1-209ENST00000525132 AMPHP49418 695 aa4.05□□□□□ -1.76
CSDE1-209ENST00000525132 NDUFV1P49821 464 aa4.05□□□□□ -1.76
CSDE1-209ENST00000525132 TEKQ02763 1124 aa4.05□□□□□ -1.76
CSDE1-209ENST00000525132 ADAM15Q13444 863 aa4.05□□□□□ -1.76
CSDE1-209ENST00000525132 BMS1Q14692 1282 aaKnown RBP4.05□□□□□ -1.76
CSDE1-209ENST00000525132 TCEAL1Q15170 157 aa4.05□□□□□ -1.76
CSDE1-209ENST00000525132 SLC23A3Q6PIS1 610 aa4.05□□□□□ -1.76
CSDE1-209ENST00000525132 TMC3Q7Z5M5 1100 aa4.05□□□□□ -1.76
CSDE1-209ENST00000525132 ENOX1Q8TC92 643 aaKnown RBP4.05□□□□□ -1.76
CSDE1-209ENST00000525132 SMCR8Q8TEV9 937 aaPredicted RBP4.05□□□□□ -1.76
CSDE1-209ENST00000525132 GPATCH3Q96I76 525 aa4.05□□□□□ -1.76
CSDE1-209ENST00000525132 FERD3LQ96RJ6 166 aa4.05□□□□□ -1.76
CSDE1-209ENST00000525132 C17orf80Q9BSJ5 609 aa4.05□□□□□ -1.76
CSDE1-209ENST00000525132 PRDM14Q9GZV8 571 aa4.05□□□□□ -1.76
CSDE1-209ENST00000525132 BCAS3Q9H6U6 928 aa4.05□□□□□ -1.76
CSDE1-209ENST00000525132 POLLQ9UGP5 575 aa4.05□□□□□ -1.76
CSDE1-209ENST00000525132 ITGB1BP2Q9UKP3 347 aa4.05□□□□□ -1.76
CSDE1-209ENST00000525132 NIP7Q9Y221 180 aaKnown RBP eCLIP4.05□□□□□ -1.76
CSDE1-209ENST00000525132 TELO2Q9Y4R8 837 aa4.05□□□□□ -1.76
CSDE1-209ENST00000525132 MYO10Q9HD67 2058 aa4.05□□□□□ -1.76
CSDE1-209ENST00000525132 CACNA1EQ15878 2313 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms