RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.9□□□□□ -0.664e-7■■■■■ 38.1
SPIDR-224ENST00000524126 PAIP2BQ9ULR5 123 aaKnown RBP10.9□□□□□ -0.66
SPIDR-224ENST00000524126 BARX2Q9UMQ3 279 aaPredicted RBP10.9□□□□□ -0.66
SPIDR-224ENST00000524126 ZNF711Q9Y462 761 aa10.9□□□□□ -0.66
SPIDR-224ENST00000524126 PITPNM2Q9BZ72 1349 aa10.9□□□□□ -0.66
SPIDR-224ENST00000524126 TCRBV5S4A2TA0A5A2 114 aa10.9□□□□□ -0.66
SPIDR-224ENST00000524126 GSG1L2A8MUP6 293 aa10.9□□□□□ -0.66
SPIDR-224ENST00000524126 DDX3XO00571 662 aaKnown RBP eCLIP10.9□□□□□ -0.66
SPIDR-224ENST00000524126 GNPATO15228 680 aa10.9□□□□□ -0.66
SPIDR-224ENST00000524126 MAPK13O15264 365 aa10.9□□□□□ -0.66
SPIDR-224ENST00000524126 EXOC3O60645 756 aa10.9□□□□□ -0.66
SPIDR-224ENST00000524126 CDR2Q01850 454 aa10.9□□□□□ -0.66
SPIDR-224ENST00000524126 TXNRD1Q16881 649 aa10.9□□□□□ -0.66
SPIDR-224ENST00000524126 SH3D19Q5HYK7 790 aa10.9□□□□□ -0.66
SPIDR-224ENST00000524126 CFAP157Q5JU67 520 aa10.9□□□□□ -0.66
SPIDR-224ENST00000524126 ARL6IP4Q66PJ3 421 aaKnown RBP10.9□□□□□ -0.66
SPIDR-224ENST00000524126 BRWD3Q6RI45 1802 aa10.9□□□□□ -0.66
SPIDR-224ENST00000524126 DYMQ7RTS9 669 aa10.9□□□□□ -0.66
SPIDR-224ENST00000524126 ZNF34Q8IZ26 560 aa10.9□□□□□ -0.66
SPIDR-224ENST00000524126 SMYD1Q8NB12 490 aa10.9□□□□□ -0.66
SPIDR-224ENST00000524126 HAUS1Q96CS2 278 aa10.9□□□□□ -0.66
SPIDR-224ENST00000524126 OSGEPQ9NPF4 335 aa10.9□□□□□ -0.66
SPIDR-224ENST00000524126 CCNL1Q9UK58 526 aaPredicted RBP10.9□□□□□ -0.66
SPIDR-224ENST00000524126 WDR37Q9Y2I8 494 aa10.9□□□□□ -0.66
SPIDR-224ENST00000524126 ANKRD36CQ5JPF3 1778 aa10.9□□□□□ -0.67
SPIDR-224ENST00000524126 RAD21O60216 631 aa10.89□□□□□ -0.67
SPIDR-224ENST00000524126 OPHN1O60890 802 aa10.89□□□□□ -0.67
SPIDR-224ENST00000524126 CAPN15O75808 1086 aa10.89□□□□□ -0.67
SPIDR-224ENST00000524126 CIAO1O76071 339 aa10.89□□□□□ -0.67
SPIDR-224ENST00000524126 CETPP11597 493 aa10.89□□□□□ -0.67
SPIDR-224ENST00000524126 ADARP55265 1226 aaKnown RBP10.89□□□□□ -0.67
SPIDR-224ENST00000524126 MAP7Q14244 749 aa10.89□□□□□ -0.67
SPIDR-224ENST00000524126 ZRSR2Q15696 482 aaKnown RBP10.89□□□□□ -0.67
SPIDR-224ENST00000524126 KBTBD12Q3ZCT8 623 aa10.89□□□□□ -0.67
SPIDR-224ENST00000524126 ZCWPW2Q504Y3 356 aa10.89□□□□□ -0.67
SPIDR-224ENST00000524126 ALKBH5Q6P6C2 394 aaKnown RBP10.89□□□□□ -0.67
SPIDR-224ENST00000524126 MAP7D3Q8IWC1 876 aa10.89□□□□□ -0.67
SPIDR-224ENST00000524126 SRRM1Q8IYB3 904 aaKnown RBP10.89□□□□□ -0.67
SPIDR-224ENST00000524126 HES6Q96HZ4 224 aa10.89□□□□□ -0.67
SPIDR-224ENST00000524126 NR1H4Q96RI1 486 aaPredicted RBP10.89□□□□□ -0.67
SPIDR-224ENST00000524126 DDX18Q9NVP1 670 aaKnown RBP10.89□□□□□ -0.67
SPIDR-224ENST00000524126 SUCLA2Q9P2R7 463 aaPredicted RBP10.89□□□□□ -0.67
SPIDR-224ENST00000524126 CIDEBQ9UHD4 219 aa10.89□□□□□ -0.67
SPIDR-224ENST00000524126 TRPC5Q9UL62 973 aaPredicted RBP10.89□□□□□ -0.67
SPIDR-224ENST00000524126 PPP1R9AQ9ULJ8 1098 aa10.89□□□□□ -0.67
SPIDR-224ENST00000524126 PHTF1Q9UMS5 762 aa10.89□□□□□ -0.67
SPIDR-224ENST00000524126 SH3GLB1Q9Y371 365 aa10.89□□□□□ -0.67
SPIDR-224ENST00000524126 COL5A3P25940 1745 aaPredicted RBP10.89□□□□□ -0.67
SPIDR-224ENST00000524126 FLT1P17948 1338 aa10.89□□□□□ -0.67
SPIDR-224ENST00000524126 MAFGO15525 162 aa10.89□□□□□ -0.67
SPIDR-224ENST00000524126 PTGIRP43119 386 aa10.89□□□□□ -0.67
SPIDR-224ENST00000524126 MKRN3Q13064 507 aaKnown RBP10.89□□□□□ -0.67
SPIDR-224ENST00000524126 MAPK7Q13164 816 aa10.89□□□□□ -0.67
SPIDR-224ENST00000524126 UBE3CQ15386 1083 aa10.89□□□□□ -0.67
SPIDR-224ENST00000524126 SEC23AQ15436 765 aa10.89□□□□□ -0.67
SPIDR-224ENST00000524126 GSTA3Q16772 222 aa10.89□□□□□ -0.67
SPIDR-224ENST00000524126 PRUNE1Q86TP1 453 aa10.89□□□□□ -0.67
SPIDR-224ENST00000524126 CABP7Q86V35 215 aa10.89□□□□□ -0.67
SPIDR-224ENST00000524126 C17orf50Q8WW18 174 aa10.89□□□□□ -0.67
SPIDR-224ENST00000524126 SYN2Q92777 582 aaPredicted RBP10.89□□□□□ -0.67
SPIDR-224ENST00000524126 ZNF653Q96CK0 615 aa10.89□□□□□ -0.67
SPIDR-224ENST00000524126 RANBP17Q9H2T7 1088 aaKnown RBP10.89□□□□□ -0.67
SPIDR-224ENST00000524126 CDC42EP4Q9H3Q1 356 aaKnown RBP10.89□□□□□ -0.67
SPIDR-224ENST00000524126 PCDH18Q9HCL0 1135 aa10.89□□□□□ -0.67
SPIDR-224ENST00000524126 LARSQ9P2J5 1176 aaKnown RBP10.89□□□□□ -0.67
SPIDR-224ENST00000524126 ZNF180Q9UJW8 692 aa10.89□□□□□ -0.67
SPIDR-224ENST00000524126 NAGPAQ9UK23 515 aa10.89□□□□□ -0.67
SPIDR-224ENST00000524126 TBC1D30Q9Y2I9 924 aa10.89□□□□□ -0.67
SPIDR-224ENST00000524126 SBF2Q86WG5 1849 aa10.89□□□□□ -0.67
SPIDR-224ENST00000524126 ATRNO75882 1429 aa10.89□□□□□ -0.67
SPIDR-224ENST00000524126 TRIM43BA6NCK2 446 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 BTNL10A8MVZ5 291 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 DDX3YO15523 660 aaKnown RBP10.88□□□□□ -0.67
SPIDR-224ENST00000524126 AMPD1P23109 780 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 MLH1P40692 756 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 WDR4P57081 412 aaKnown RBP10.88□□□□□ -0.67
SPIDR-224ENST00000524126 TRIM28Q13263 835 aaKnown RBP10.88□□□□□ -0.67
SPIDR-224ENST00000524126 MOGSQ13724 837 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 THOC5Q13769 683 aaKnown RBP10.88□□□□□ -0.67
SPIDR-224ENST00000524126 RRP1BQ14684 758 aaKnown RBP10.88□□□□□ -0.67
SPIDR-224ENST00000524126 SH2D4BQ5SQS7 431 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 DAB2IPQ5VWQ8 1189 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 TBC1D9BQ66K14 1250 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 PHLDB3Q6NSJ2 640 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 TTC27Q6P3X3 843 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 CNNM4Q6P4Q7 775 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 OLFML1Q6UWY5 402 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 TMEM110Q86TL2 294 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 SLF2Q8IX21 1173 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 SLC15A3Q8IY34 581 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 SRBD1Q8N5C6 995 aaKnown RBP10.88□□□□□ -0.67
SPIDR-224ENST00000524126 ARHGEF1Q92888 912 aaKnown RBP10.88□□□□□ -0.67
SPIDR-224ENST00000524126 KCNN1Q92952 543 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 EDEM3Q9BZQ6 932 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 TLE6Q9H808 572 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 TMOD4Q9NZQ9 345 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 MTRF1LQ9UGC7 380 aaKnown RBP10.88□□□□□ -0.67
SPIDR-224ENST00000524126 ZFP69BQ9UJL9 534 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 PTPN22Q9Y2R2 807 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 CNTNAP5Q8WYK1 1306 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms