RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 CCND2P30279 289 aa11.62□□□□□ -0.55
RAB11FIP1-204ENST00000522774 COPB2P35606 906 aa11.62□□□□□ -0.55
RAB11FIP1-204ENST00000522774 HMGCS2P54868 508 aa11.62□□□□□ -0.55
RAB11FIP1-204ENST00000522774 ZNF211Q13398 564 aaPredicted RBP11.62□□□□□ -0.55
RAB11FIP1-204ENST00000522774 PRPF4BQ13523 1007 aaKnown RBP11.62□□□□□ -0.55
RAB11FIP1-204ENST00000522774 ADAT2Q7Z6V5 191 aaKnown RBP11.62□□□□□ -0.55
RAB11FIP1-204ENST00000522774 NLRX1Q86UT6 975 aa11.62□□□□□ -0.55
RAB11FIP1-204ENST00000522774 PPM1KQ8N3J5 372 aa11.62□□□□□ -0.55
RAB11FIP1-204ENST00000522774 EPS8L1Q8TE68 723 aa11.62□□□□□ -0.55
RAB11FIP1-204ENST00000522774 SLC16A10Q8TF71 515 aa11.62□□□□□ -0.55
RAB11FIP1-204ENST00000522774 ALG3Q92685 438 aa11.62□□□□□ -0.55
RAB11FIP1-204ENST00000522774 FAM84AQ96KN4 292 aa11.62□□□□□ -0.55
RAB11FIP1-204ENST00000522774 CNOT7Q9UIV1 285 aaKnown RBP11.62□□□□□ -0.55
RAB11FIP1-204ENST00000522774 PCDHA10Q9Y5I2 948 aa11.62□□□□□ -0.55
RAB11FIP1-204ENST00000522774 ATMINO43313 823 aaPredicted RBP11.62□□□□□ -0.55
RAB11FIP1-204ENST00000522774 STBD1O95210 358 aa11.62□□□□□ -0.55
RAB11FIP1-204ENST00000522774 KCNA2P16389 499 aa11.62□□□□□ -0.55
RAB11FIP1-204ENST00000522774 RPS12P25398 132 aaKnown RBP11.62□□□□□ -0.55
RAB11FIP1-204ENST00000522774 HSPA9P38646 679 aaKnown RBP11.62□□□□□ -0.55
RAB11FIP1-204ENST00000522774 BAG6P46379 1132 aa11.62□□□□□ -0.55
RAB11FIP1-204ENST00000522774 TGFB2P61812 414 aa11.62□□□□□ -0.55
RAB11FIP1-204ENST00000522774 AADACL2Q6P093 401 aa11.62□□□□□ -0.55
RAB11FIP1-204ENST00000522774 SCYL3Q8IZE3 742 aa11.62□□□□□ -0.55
RAB11FIP1-204ENST00000522774 CEP170P1Q96L14 293 aa11.62□□□□□ -0.55
RAB11FIP1-204ENST00000522774 WRNIP1Q96S55 665 aa11.62□□□□□ -0.55
RAB11FIP1-204ENST00000522774 KMT5AQ9NQR1 393 aa11.62□□□□□ -0.55
RAB11FIP1-204ENST00000522774 TMOD4Q9NZQ9 345 aa11.62□□□□□ -0.55
RAB11FIP1-204ENST00000522774 NOCTQ9UK39 431 aaKnown RBP11.62□□□□□ -0.55
RAB11FIP1-204ENST00000522774 CYP26A1O43174 497 aa11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 DAPK3O43293 454 aa11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 PTPRAP18433 802 aa11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 FLT3P36888 993 aa11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 POU5F1Q01860 360 aaKnown RBP11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 DMP1Q13316 513 aaPredicted RBP11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 TTC19Q6DKK2 380 aaPredicted RBP11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 SLC47A2Q86VL8 602 aa11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 ZNF280CQ8ND82 737 aa11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 PARD3BQ8TEW8 1205 aa11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 RNPC3Q96LT9 517 aaKnown RBP11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 IWS1Q96ST2 819 aa11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 ERVK-5Q9HDB9 667 aa11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 CWC15Q9P013 229 aaKnown RBP11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 CTTNBP2NLQ9P2B4 639 aa11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 PPP1R1BQ9UD71 204 aaPredicted RBP11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 ZNF214Q9UL59 606 aaPredicted RBP11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 TTC7AQ9ULT0 858 aaPredicted RBP11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 ALG6Q9Y672 507 aa11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 MARCKSL1P49006 195 aa11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 SMTNP53814 917 aa11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 SNRPFP62306 86 aaKnown RBP11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 CUL1Q13616 776 aa11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 UAP1Q16222 522 aaPredicted RBP11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 FAM71AQ8IYT1 594 aa11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 GPRASP2Q96D09 838 aa11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 SLITRK6Q9H5Y7 841 aa11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 LCMT1Q9UIC8 334 aa11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 PHIPQ8WWQ0 1821 aa11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 TMEM110-MUSTN1A8MSY1 372 aa11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 PMM2O15305 246 aa11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 IVLP07476 585 aa11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 IRAK1P51617 712 aa11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 TMEM132BQ14DG7 1078 aa11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 SWSAP1Q6NVH7 229 aa11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 CPNE8Q86YQ8 564 aa11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 RHOT2Q8IXI1 618 aa11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 TAS1R2Q8TE23 839 aa11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 KRT35Q92764 455 aa11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 TRIM51Q9BSJ1 452 aa11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 CARD9Q9H257 536 aa11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 EXOC7Q9UPT5 735 aa11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 PLAAQ9Y263 795 aa11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 USP20Q9Y2K6 914 aa11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 BRCA1P38398 1863 aaKnown RBP11.61□□□□□ -0.55
RAB11FIP1-204ENST00000522774 ARID2Q68CP9 1835 aa11.6□□□□□ -0.55
RAB11FIP1-204ENST00000522774 MMEP08473 750 aa11.6□□□□□ -0.55
RAB11FIP1-204ENST00000522774 KRT39Q6A163 491 aa11.6□□□□□ -0.55
RAB11FIP1-204ENST00000522774 CCDC60Q8IWA6 550 aaPredicted RBP11.6□□□□□ -0.55
RAB11FIP1-204ENST00000522774 HELQQ8TDG4 1101 aa11.6□□□□□ -0.55
RAB11FIP1-204ENST00000522774 SHC3Q92529 594 aa11.6□□□□□ -0.55
RAB11FIP1-204ENST00000522774 SENP7Q9BQF6 1050 aa11.6□□□□□ -0.55
RAB11FIP1-204ENST00000522774 CAPS2Q9BXY5 557 aa11.6□□□□□ -0.55
RAB11FIP1-204ENST00000522774 DPH5Q9H2P9 285 aa11.6□□□□□ -0.55
RAB11FIP1-204ENST00000522774 RABEP2Q9H5N1 569 aa11.6□□□□□ -0.55
RAB11FIP1-204ENST00000522774 XPNPEP1Q9NQW7 623 aa11.6□□□□□ -0.55
RAB11FIP1-204ENST00000522774 ZNF112Q9UJU3 913 aa11.6□□□□□ -0.55
RAB11FIP1-204ENST00000522774 GRIN2DO15399 1336 aa11.6□□□□□ -0.55
RAB11FIP1-204ENST00000522774 ZNFX1Q9P2E3 1918 aaKnown RBP11.6□□□□□ -0.55
RAB11FIP1-204ENST00000522774 RTN2O75298 545 aa11.6□□□□□ -0.55
RAB11FIP1-204ENST00000522774 CLSTN1O94985 981 aa11.6□□□□□ -0.55
RAB11FIP1-204ENST00000522774 CALCAP01258 141 aa11.6□□□□□ -0.55
RAB11FIP1-204ENST00000522774 FDX1P10109 184 aa11.6□□□□□ -0.55
RAB11FIP1-204ENST00000522774 DSG3P32926 999 aa11.6□□□□□ -0.55
RAB11FIP1-204ENST00000522774 HSD17B3P37058 310 aa11.6□□□□□ -0.55
RAB11FIP1-204ENST00000522774 HADHBP55084 474 aaKnown RBP11.6□□□□□ -0.55
RAB11FIP1-204ENST00000522774 MCCD1P59942 119 aaPredicted RBP11.6□□□□□ -0.55
RAB11FIP1-204ENST00000522774 GPC5P78333 572 aa11.6□□□□□ -0.55
RAB11FIP1-204ENST00000522774 FMO1Q01740 532 aa11.6□□□□□ -0.55
RAB11FIP1-204ENST00000522774 SF3B2Q13435 895 aaKnown RBP11.6□□□□□ -0.55
RAB11FIP1-204ENST00000522774 SKIDA1Q1XH10 827 aa11.6□□□□□ -0.55
RAB11FIP1-204ENST00000522774 XRRA1Q6P2D8 792 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms