RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 COL4A6Q14031 1691 aa7.16□□□□□ -1.26
PABPC1-220ENST00000522658 HMX2A2RU54 273 aa7.16□□□□□ -1.26
PABPC1-220ENST00000522658 KLRF2D3W0D1 207 aa7.16□□□□□ -1.26
PABPC1-220ENST00000522658 TREHO43280 583 aa7.16□□□□□ -1.26
PABPC1-220ENST00000522658 FIBPO43427 364 aa7.16□□□□□ -1.26
PABPC1-220ENST00000522658 STAG3L1P0CL83 205 aa7.16□□□□□ -1.26
PABPC1-220ENST00000522658 HSD17B4P51659 736 aa7.16□□□□□ -1.26
PABPC1-220ENST00000522658 SMAD2Q15796 467 aaKnown RBP7.16□□□□□ -1.26
PABPC1-220ENST00000522658 TRIM71Q2Q1W2 868 aaKnown RBP7.16□□□□□ -1.26
PABPC1-220ENST00000522658 CWC27Q6UX04 472 aaKnown RBP7.16□□□□□ -1.26
PABPC1-220ENST00000522658 METTL7BQ6UX53 244 aa7.16□□□□□ -1.26
PABPC1-220ENST00000522658 XKR5Q6UX68 686 aa7.16□□□□□ -1.26
PABPC1-220ENST00000522658 CYFIP1Q7L576 1253 aa7.16□□□□□ -1.26
PABPC1-220ENST00000522658 NLRX1Q86UT6 975 aa7.16□□□□□ -1.26
PABPC1-220ENST00000522658 ENAHQ8N8S7 591 aaPredicted RBP7.16□□□□□ -1.26
PABPC1-220ENST00000522658 GIMAP8Q8ND71 665 aaPredicted RBP7.16□□□□□ -1.26
PABPC1-220ENST00000522658 TBC1D5Q92609 795 aa7.16□□□□□ -1.26
PABPC1-220ENST00000522658 WNT8BQ93098 351 aa7.16□□□□□ -1.26
PABPC1-220ENST00000522658 PBXIP1Q96AQ6 731 aa7.16□□□□□ -1.26
PABPC1-220ENST00000522658 CDHR1Q96JP9 859 aa7.16□□□□□ -1.26
PABPC1-220ENST00000522658 CTAGE1Q96RT6 745 aa7.16□□□□□ -1.26
PABPC1-220ENST00000522658 IRF2BPLQ9H1B7 796 aa7.16□□□□□ -1.26
PABPC1-220ENST00000522658 JMJD4Q9H9V9 463 aa7.16□□□□□ -1.26
PABPC1-220ENST00000522658 TUBE1Q9UJT0 475 aa7.16□□□□□ -1.26
PABPC1-220ENST00000522658 OAS3Q9Y6K5 1087 aaKnown RBP7.16□□□□□ -1.26
PABPC1-220ENST00000522658 MYH6P13533 1939 aa7.16□□□□□ -1.26
PABPC1-220ENST00000522658 KIAA1217Q5T5P2 1943 aa7.16□□□□□ -1.26
PABPC1-220ENST00000522658 NRCAMQ92823 1304 aa7.16□□□□□ -1.26
PABPC1-220ENST00000522658 TET1Q8NFU7 2136 aa7.16□□□□□ -1.26
PABPC1-220ENST00000522658 RALGAPA2Q2PPJ7 1873 aa7.15□□□□□ -1.26
PABPC1-220ENST00000522658 TRANK1O15050 2925 aa7.15□□□□□ -1.26
PABPC1-220ENST00000522658 REV3LO60673 3130 aa7.15□□□□□ -1.26
PABPC1-220ENST00000522658 H3BRJ5 948 aa7.15□□□□□ -1.26
PABPC1-220ENST00000522658 MBTPS2O43462 519 aa7.15□□□□□ -1.26
PABPC1-220ENST00000522658 MMP1P03956 469 aa7.15□□□□□ -1.26
PABPC1-220ENST00000522658 MARK3P27448 753 aa7.15□□□□□ -1.26
PABPC1-220ENST00000522658 BMPR1AP36894 532 aa7.15□□□□□ -1.26
PABPC1-220ENST00000522658 GP2P55259 537 aaKnown RBP7.15□□□□□ -1.26
PABPC1-220ENST00000522658 PPFIA1Q13136 1202 aa7.15□□□□□ -1.26
PABPC1-220ENST00000522658 GPNMBQ14956 572 aa7.15□□□□□ -1.26
PABPC1-220ENST00000522658 TCTN1Q2MV58 587 aa7.15□□□□□ -1.26
PABPC1-220ENST00000522658 PAN2Q504Q3 1202 aaKnown RBP7.15□□□□□ -1.26
PABPC1-220ENST00000522658 STOX1Q6ZVD7 989 aa7.15□□□□□ -1.26
PABPC1-220ENST00000522658 ATCAYQ86WG3 371 aa7.15□□□□□ -1.26
PABPC1-220ENST00000522658 FAM20CQ8IXL6 584 aa7.15□□□□□ -1.26
PABPC1-220ENST00000522658 MICAL1Q8TDZ2 1067 aa7.15□□□□□ -1.26
PABPC1-220ENST00000522658 GLG1Q92896 1179 aa7.15□□□□□ -1.26
PABPC1-220ENST00000522658 FAM83CQ9BQN1 747 aa7.15□□□□□ -1.26
PABPC1-220ENST00000522658 FTHL17Q9BXU8 183 aa7.15□□□□□ -1.26
PABPC1-220ENST00000522658 LNPKQ9C0E8 428 aa7.15□□□□□ -1.26
PABPC1-220ENST00000522658 ZMYND15Q9H091 742 aa7.15□□□□□ -1.26
PABPC1-220ENST00000522658 RNPEPQ9H4A4 650 aa7.15□□□□□ -1.26
PABPC1-220ENST00000522658 AZI2Q9H6S1 392 aa7.15□□□□□ -1.26
PABPC1-220ENST00000522658 OSGEPQ9NPF4 335 aa7.15□□□□□ -1.26
PABPC1-220ENST00000522658 SETD4Q9NVD3 440 aa7.15□□□□□ -1.26
PABPC1-220ENST00000522658 KANSL3Q9P2N6 904 aa7.15□□□□□ -1.26
PABPC1-220ENST00000522658 TCEAL9Q9UHQ7 104 aa7.15□□□□□ -1.26
PABPC1-220ENST00000522658 BDP1A6H8Y1 2624 aa7.15□□□□□ -1.26
PABPC1-220ENST00000522658 LAMA4Q16363 1823 aa7.15□□□□□ -1.27
PABPC1-220ENST00000522658 NLRC5Q86WI3 1866 aa7.15□□□□□ -1.27
PABPC1-220ENST00000522658 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.14□□□□□ -1.27
PABPC1-220ENST00000522658 TMEM221A6NGB7 291 aa7.14□□□□□ -1.27
PABPC1-220ENST00000522658 C5orf67F2Z3F1 127 aa7.14□□□□□ -1.27
PABPC1-220ENST00000522658 M0R296 226 aa7.14□□□□□ -1.27
PABPC1-220ENST00000522658 IFIT3O14879 490 aaKnown RBP7.14□□□□□ -1.27
PABPC1-220ENST00000522658 ACPPP15309 386 aa7.14□□□□□ -1.27
PABPC1-220ENST00000522658 SDSP20132 328 aa7.14□□□□□ -1.27
PABPC1-220ENST00000522658 CA8P35219 290 aa7.14□□□□□ -1.27
PABPC1-220ENST00000522658 IGBP1P78318 339 aa7.14□□□□□ -1.27
PABPC1-220ENST00000522658 HYAL1Q12794 435 aa7.14□□□□□ -1.27
PABPC1-220ENST00000522658 PAK2Q13177 524 aa7.14□□□□□ -1.27
PABPC1-220ENST00000522658 WTAPQ15007 396 aa7.14□□□□□ -1.27
PABPC1-220ENST00000522658 NAALADL2Q58DX5 795 aa7.14□□□□□ -1.27
PABPC1-220ENST00000522658 HERC4Q5GLZ8 1057 aaPredicted RBP7.14□□□□□ -1.27
PABPC1-220ENST00000522658 ODR4Q5SWX8 454 aa7.14□□□□□ -1.27
PABPC1-220ENST00000522658 TSHZ1Q6ZSZ6 1077 aa7.14□□□□□ -1.27
PABPC1-220ENST00000522658 CATIPQ7Z7H3 387 aa7.14□□□□□ -1.27
PABPC1-220ENST00000522658 VSIG10LQ86VR7 867 aa7.14□□□□□ -1.27
PABPC1-220ENST00000522658 TMEM87AQ8NBN3 555 aa7.14□□□□□ -1.27
PABPC1-220ENST00000522658 IL31RAQ8NI17 732 aa7.14□□□□□ -1.27
PABPC1-220ENST00000522658 CTCFLQ8NI51 663 aaPredicted RBP7.14□□□□□ -1.27
PABPC1-220ENST00000522658 LMBR1Q8WVP7 490 aa7.14□□□□□ -1.27
PABPC1-220ENST00000522658 PIBF1Q8WXW3 757 aa7.14□□□□□ -1.27
PABPC1-220ENST00000522658 C16orf70Q9BSU1 422 aa7.14□□□□□ -1.27
PABPC1-220ENST00000522658 DSCC1Q9BVC3 393 aa7.14□□□□□ -1.27
PABPC1-220ENST00000522658 DZANK1Q9NVP4 752 aa7.14□□□□□ -1.27
PABPC1-220ENST00000522658 ERAP1Q9NZ08 941 aa7.14□□□□□ -1.27
PABPC1-220ENST00000522658 RTEL1Q9NZ71 1219 aa7.14□□□□□ -1.27
PABPC1-220ENST00000522658 SEPT3Q9UH03 358 aa7.14□□□□□ -1.27
PABPC1-220ENST00000522658 PCDHB12Q9Y5F1 795 aa7.14□□□□□ -1.27
PABPC1-220ENST00000522658 SALL3Q9BXA9 1300 aa7.13□□□□□ -1.27
PABPC1-220ENST00000522658 PNMA6FA0A0J9YX94 578 aa7.13□□□□□ -1.27
PABPC1-220ENST00000522658 DENND3A2RUS2 1198 aa7.13□□□□□ -1.27
PABPC1-220ENST00000522658 GRM6O15303 877 aa7.13□□□□□ -1.27
PABPC1-220ENST00000522658 TBX10O75333 385 aa7.13□□□□□ -1.27
PABPC1-220ENST00000522658 KIF5BP33176 963 aa7.13□□□□□ -1.27
PABPC1-220ENST00000522658 TCF7P36402 384 aaPredicted RBP7.13□□□□□ -1.27
PABPC1-220ENST00000522658 NRIP1P48552 1158 aa7.13□□□□□ -1.27
PABPC1-220ENST00000522658 IRAK1P51617 712 aa7.13□□□□□ -1.27
PABPC1-220ENST00000522658 BMS1Q14692 1282 aaKnown RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms