RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 CELF4Q9BZC1 486 aaKnown RBP9.1□□□□□ -0.95
PVT1-213ENST00000522414 IGFLR1Q9H665 355 aa9.1□□□□□ -0.95
PVT1-213ENST00000522414 ZNF358Q9NW07 568 aa9.1□□□□□ -0.95
PVT1-213ENST00000522414 NID2Q14112 1375 aa9.1□□□□□ -0.95
PVT1-213ENST00000522414 TTC3P53804 2025 aa9.09□□□□□ -0.95
PVT1-213ENST00000522414 SMIM35A0A1B0GVV1 85 aa9.09□□□□□ -0.95
PVT1-213ENST00000522414 FAM86C2PA6NEL3 165 aa9.09□□□□□ -0.95
PVT1-213ENST00000522414 ZBTB42B2RXF5 422 aa9.09□□□□□ -0.95
PVT1-213ENST00000522414 IPO5O00410 1097 aaKnown RBP9.09□□□□□ -0.95
PVT1-213ENST00000522414 EDIL3O43854 480 aa9.09□□□□□ -0.95
PVT1-213ENST00000522414 RB1P06400 928 aa9.09□□□□□ -0.95
PVT1-213ENST00000522414 CYP3A4P08684 503 aa9.09□□□□□ -0.95
PVT1-213ENST00000522414 HMGB1P09429 215 aaKnown RBP9.09□□□□□ -0.95
PVT1-213ENST00000522414 SCG2P13521 617 aa9.09□□□□□ -0.95
PVT1-213ENST00000522414 DNAJB1P25685 340 aa9.09□□□□□ -0.95
PVT1-213ENST00000522414 HSPA4P34932 840 aa9.09□□□□□ -0.95
PVT1-213ENST00000522414 LTBRP36941 435 aa9.09□□□□□ -0.95
PVT1-213ENST00000522414 RCAN1P53805 252 aa9.09□□□□□ -0.95
PVT1-213ENST00000522414 CAMK1Q14012 370 aa9.09□□□□□ -0.95
PVT1-213ENST00000522414 PAN2Q504Q3 1202 aaKnown RBP9.09□□□□□ -0.95
PVT1-213ENST00000522414 PRR16Q569H4 304 aa9.09□□□□□ -0.95
PVT1-213ENST00000522414 GJD3Q8N144 294 aa9.09□□□□□ -0.95
PVT1-213ENST00000522414 NME8Q8N427 588 aa9.09□□□□□ -0.95
PVT1-213ENST00000522414 NEK9Q8TD19 979 aa9.09□□□□□ -0.95
PVT1-213ENST00000522414 ATP8B4Q8TF62 1192 aa9.09□□□□□ -0.95
PVT1-213ENST00000522414 TMEM40Q8WWA1 233 aa9.09□□□□□ -0.95
PVT1-213ENST00000522414 TNPO1Q92973 898 aaKnown RBP9.09□□□□□ -0.95
PVT1-213ENST00000522414 CLP1Q92989 425 aaKnown RBP9.09□□□□□ -0.95
PVT1-213ENST00000522414 GJA10Q969M2 543 aa9.09□□□□□ -0.95
PVT1-213ENST00000522414 PPP1R16BQ96T49 567 aa9.09□□□□□ -0.95
PVT1-213ENST00000522414 ZMYND12Q9H0C1 365 aa9.09□□□□□ -0.95
PVT1-213ENST00000522414 RC3H2Q9HBD1 1191 aaKnown RBP9.09□□□□□ -0.95
PVT1-213ENST00000522414 NCOA5Q9HCD5 579 aaKnown RBP9.09□□□□□ -0.95
PVT1-213ENST00000522414 C11orf16Q9NQ32 467 aa9.09□□□□□ -0.95
PVT1-213ENST00000522414 ZNF302Q9NR11 478 aa9.09□□□□□ -0.95
PVT1-213ENST00000522414 CLDND1Q9NY35 253 aa9.09□□□□□ -0.95
PVT1-213ENST00000522414 PLAGL2Q9UPG8 496 aa9.09□□□□□ -0.95
PVT1-213ENST00000522414 NOC2LQ9Y3T9 749 aaKnown RBP9.09□□□□□ -0.95
PVT1-213ENST00000522414 TRPV2Q9Y5S1 764 aa9.09□□□□□ -0.95
PVT1-213ENST00000522414 MRPL42Q9Y6G3 142 aaKnown RBP9.09□□□□□ -0.95
PVT1-213ENST00000522414 IGSF9BQ9UPX0 1349 aa9.08□□□□□ -0.96
PVT1-213ENST00000522414 CCDC196A0A1B0GTZ2 297 aa9.08□□□□□ -0.96
PVT1-213ENST00000522414 C5orf67F2Z3F1 127 aa9.08□□□□□ -0.96
PVT1-213ENST00000522414 PI4K2BG5E9Z4 385 aa9.08□□□□□ -0.96
PVT1-213ENST00000522414 M0QZ92 97 aa9.08□□□□□ -0.96
PVT1-213ENST00000522414 LINC01565O15544 149 aa9.08□□□□□ -0.96
PVT1-213ENST00000522414 PRPF3O43395 683 aaKnown RBP9.08□□□□□ -0.96
PVT1-213ENST00000522414 HBP1O60381 514 aa9.08□□□□□ -0.96
PVT1-213ENST00000522414 MGEA5O60502 916 aa9.08□□□□□ -0.96
PVT1-213ENST00000522414 DTNBO60941 627 aa9.08□□□□□ -0.96
PVT1-213ENST00000522414 RPS6KB1P23443 525 aa9.08□□□□□ -0.96
PVT1-213ENST00000522414 PDIA3P30101 505 aaKnown RBP9.08□□□□□ -0.96
PVT1-213ENST00000522414 HYAL1Q12794 435 aa9.08□□□□□ -0.96
PVT1-213ENST00000522414 PAK2Q13177 524 aa9.08□□□□□ -0.96
PVT1-213ENST00000522414 AP3B2Q13367 1082 aa9.08□□□□□ -0.96
PVT1-213ENST00000522414 CLUL1Q15846 466 aa9.08□□□□□ -0.96
PVT1-213ENST00000522414 NTRK3Q16288 839 aa9.08□□□□□ -0.96
PVT1-213ENST00000522414 KIZQ2M2Z5 673 aa9.08□□□□□ -0.96
PVT1-213ENST00000522414 FAM102BQ5T8I3 360 aa9.08□□□□□ -0.96
PVT1-213ENST00000522414 MIS18BP1Q6P0N0 1132 aa9.08□□□□□ -0.96
PVT1-213ENST00000522414 BLOC1S2Q6QNY1 142 aa9.08□□□□□ -0.96
PVT1-213ENST00000522414 NIPA1Q7RTP0 329 aa9.08□□□□□ -0.96
PVT1-213ENST00000522414 CKAP2LQ8IYA6 745 aa9.08□□□□□ -0.96
PVT1-213ENST00000522414 METTL13Q8N6R0 699 aa9.08□□□□□ -0.96
PVT1-213ENST00000522414 PABPC5Q96DU9 382 aaKnown RBP9.08□□□□□ -0.96
PVT1-213ENST00000522414 ZNF577Q9BSK1 485 aa9.08□□□□□ -0.96
PVT1-213ENST00000522414 SSBP4Q9BWG4 385 aaPredicted RBP9.08□□□□□ -0.96
PVT1-213ENST00000522414 FTHL17Q9BXU8 183 aa9.08□□□□□ -0.96
PVT1-213ENST00000522414 GLT8D2Q9H1C3 349 aa9.08□□□□□ -0.96
PVT1-213ENST00000522414 NSUN3Q9H649 340 aaKnown RBP9.08□□□□□ -0.96
PVT1-213ENST00000522414 C6orf50Q9HD87 102 aa9.08□□□□□ -0.96
PVT1-213ENST00000522414 VPS54Q9P1Q0 977 aa9.08□□□□□ -0.96
PVT1-213ENST00000522414 ST3GAL5Q9UNP4 418 aa9.08□□□□□ -0.96
PVT1-213ENST00000522414 SQORQ9Y6N5 450 aa9.08□□□□□ -0.96
PVT1-213ENST00000522414 WDFY4Q6ZS81 3184 aa9.08□□□□□ -0.96
PVT1-213ENST00000522414 ADGRA3Q8IWK6 1321 aa9.07□□□□□ -0.96
PVT1-213ENST00000522414 hCG_1984214I3L0E3 225 aa9.07□□□□□ -0.96
PVT1-213ENST00000522414 RPS6KA5O75582 802 aa9.07□□□□□ -0.96
PVT1-213ENST00000522414 VTNP04004 478 aa9.07□□□□□ -0.96
PVT1-213ENST00000522414 ITGB1P05556 798 aa9.07□□□□□ -0.96
PVT1-213ENST00000522414 SLC26A2P50443 739 aa9.07□□□□□ -0.96
PVT1-213ENST00000522414 AKAP17AQ02040 695 aaKnown RBP9.07□□□□□ -0.96
PVT1-213ENST00000522414 COL19A1Q14993 1142 aa9.07□□□□□ -0.96
PVT1-213ENST00000522414 TIGD5Q53EQ6 642 aa9.07□□□□□ -0.96
PVT1-213ENST00000522414 ZNF484Q5JVG2 852 aa9.07□□□□□ -0.96
PVT1-213ENST00000522414 FAM160B1Q5W0V3 765 aa9.07□□□□□ -0.96
PVT1-213ENST00000522414 SLC9A9Q8IVB4 645 aa9.07□□□□□ -0.96
PVT1-213ENST00000522414 REXO1Q8N1G1 1221 aaKnown RBP9.07□□□□□ -0.96
PVT1-213ENST00000522414 FBXL16Q8N461 479 aa9.07□□□□□ -0.96
PVT1-213ENST00000522414 ZNF713Q8N859 430 aaPredicted RBP9.07□□□□□ -0.96
PVT1-213ENST00000522414 KLHL23Q8NBE8 558 aa9.07□□□□□ -0.96
PVT1-213ENST00000522414 SPPL3Q8TCT6 385 aa9.07□□□□□ -0.96
PVT1-213ENST00000522414 TP53INP1Q96A56 240 aa9.07□□□□□ -0.96
PVT1-213ENST00000522414 CCDC136Q96JN2 1154 aa9.07□□□□□ -0.96
PVT1-213ENST00000522414 ZNF668Q96K58 619 aaPredicted RBP9.07□□□□□ -0.96
PVT1-213ENST00000522414 ADAM2Q99965 735 aa9.07□□□□□ -0.96
PVT1-213ENST00000522414 C11orf84Q9BUA3 381 aaPredicted RBP9.07□□□□□ -0.96
PVT1-213ENST00000522414 SLC26A6Q9BXS9 759 aa9.07□□□□□ -0.96
PVT1-213ENST00000522414 GOLGA2P5Q9HBQ8 144 aa9.07□□□□□ -0.96
PVT1-213ENST00000522414 ERVK-5Q9HDB9 667 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms