RNA–Protein interactions for RNA: ENST00000521678.1

IGHV3-60-201, Transcript of immunoglobulin heavy variable 3-60 (pseudogene), humanhuman

BASIC

Gene IGHV3-60, Length 354 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-60-201ENST00000521678 RPS6KB1P23443 525 aa12.87□□□□□ -0.35
IGHV3-60-201ENST00000521678 HSPA4P34932 840 aa12.87□□□□□ -0.35
IGHV3-60-201ENST00000521678 AK2P54819 239 aa12.87□□□□□ -0.35
IGHV3-60-201ENST00000521678 IRX6P78412 446 aaPredicted RBP12.87□□□□□ -0.35
IGHV3-60-201ENST00000521678 LAMTOR4Q0VGL1 99 aa12.87□□□□□ -0.35
IGHV3-60-201ENST00000521678 PPP2R5CQ13362 524 aa12.87□□□□□ -0.35
IGHV3-60-201ENST00000521678 PCBP1Q15365 356 aaKnown RBP eCLIP12.87□□□□□ -0.35
IGHV3-60-201ENST00000521678 PLA2G4FQ68DD2 849 aa12.87□□□□□ -0.35
IGHV3-60-201ENST00000521678 GALNT17Q6IS24 598 aa12.87□□□□□ -0.35
IGHV3-60-201ENST00000521678 BLOC1S2Q6QNY1 142 aa12.87□□□□□ -0.35
IGHV3-60-201ENST00000521678 DAGLBQ8NCG7 672 aa12.87□□□□□ -0.35
IGHV3-60-201ENST00000521678 SLC7A3Q8WY07 619 aa12.87□□□□□ -0.35
IGHV3-60-201ENST00000521678 STAMQ92783 540 aa12.87□□□□□ -0.35
IGHV3-60-201ENST00000521678 FAM20AQ96MK3 541 aa12.87□□□□□ -0.35
IGHV3-60-201ENST00000521678 JAKMIP1Q96N16 626 aaKnown RBP12.87□□□□□ -0.35
IGHV3-60-201ENST00000521678 FAM193BQ96PV7 902 aaPredicted RBP12.87□□□□□ -0.35
IGHV3-60-201ENST00000521678 NT5C3AQ9H0P0 336 aa12.87□□□□□ -0.35
IGHV3-60-201ENST00000521678 RNF39Q9H2S5 420 aa12.87□□□□□ -0.35
IGHV3-60-201ENST00000521678 PLEKHA4Q9H4M7 779 aa12.87□□□□□ -0.35
IGHV3-60-201ENST00000521678 NCOA5Q9HCD5 579 aaKnown RBP12.87□□□□□ -0.35
IGHV3-60-201ENST00000521678 KCNMB3Q9NPA1 279 aa12.87□□□□□ -0.35
IGHV3-60-201ENST00000521678 MIOSQ9NXC5 875 aa12.87□□□□□ -0.35
IGHV3-60-201ENST00000521678 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.87□□□□□ -0.35
IGHV3-60-201ENST00000521678 WRAP73Q9P2S5 460 aaPredicted RBP12.87□□□□□ -0.35
IGHV3-60-201ENST00000521678 VAV3Q9UKW4 847 aa12.87□□□□□ -0.35
IGHV3-60-201ENST00000521678 CLUHO75153 1309 aa12.87□□□□□ -0.35
IGHV3-60-201ENST00000521678 ARL5CA6NH57 179 aa12.86□□□□□ -0.35
IGHV3-60-201ENST00000521678 C2CD2LO14523 706 aa12.86□□□□□ -0.35
IGHV3-60-201ENST00000521678 GAS2O43903 313 aaKnown RBP12.86□□□□□ -0.35
IGHV3-60-201ENST00000521678 DKC1O60832 514 aaKnown RBP eCLIP12.86□□□□□ -0.35
IGHV3-60-201ENST00000521678 P4HBP07237 508 aaKnown RBP12.86□□□□□ -0.35
IGHV3-60-201ENST00000521678 CFHP08603 1231 aa12.86□□□□□ -0.35
IGHV3-60-201ENST00000521678 GBP2P32456 591 aaPredicted RBP12.86□□□□□ -0.35
IGHV3-60-201ENST00000521678 RFC5P40937 340 aa12.86□□□□□ -0.35
IGHV3-60-201ENST00000521678 ELMSAN1Q6PJG2 1045 aa12.86□□□□□ -0.35
IGHV3-60-201ENST00000521678 C4orf19Q8IY42 314 aa12.86□□□□□ -0.35
IGHV3-60-201ENST00000521678 BLIDQ8IZY5 108 aa12.86□□□□□ -0.35
IGHV3-60-201ENST00000521678 PSPC1Q8WXF1 523 aaKnown RBP12.86□□□□□ -0.35
IGHV3-60-201ENST00000521678 TMEM143Q96AN5 459 aa12.86□□□□□ -0.35
IGHV3-60-201ENST00000521678 TBC1D17Q9HA65 648 aa12.86□□□□□ -0.35
IGHV3-60-201ENST00000521678 SLC2A4RGQ9NR83 387 aa12.86□□□□□ -0.35
IGHV3-60-201ENST00000521678 PRG3Q9Y2Y8 225 aaPredicted RBP12.86□□□□□ -0.35
IGHV3-60-201ENST00000521678 SPDYE4A6NLX3 237 aa12.85□□□□□ -0.35
IGHV3-60-201ENST00000521678 CDC45O75419 566 aa12.85□□□□□ -0.35
IGHV3-60-201ENST00000521678 ITGA4P13612 1032 aa12.85□□□□□ -0.35
IGHV3-60-201ENST00000521678 GLUD2P49448 558 aa12.85□□□□□ -0.35
IGHV3-60-201ENST00000521678 PTENP60484 403 aa12.85□□□□□ -0.35
IGHV3-60-201ENST00000521678 CCT2P78371 535 aaKnown RBP12.85□□□□□ -0.35
IGHV3-60-201ENST00000521678 POU5F1BQ06416 359 aa12.85□□□□□ -0.35
IGHV3-60-201ENST00000521678 HTR4Q13639 388 aa12.85□□□□□ -0.35
IGHV3-60-201ENST00000521678 FERMT3Q86UX7 667 aa12.85□□□□□ -0.35
IGHV3-60-201ENST00000521678 IFNLR1Q8IU57 520 aaPredicted RBP12.85□□□□□ -0.35
IGHV3-60-201ENST00000521678 GSTCDQ8NEC7 633 aa12.85□□□□□ -0.35
IGHV3-60-201ENST00000521678 SMG7Q92540 1137 aaKnown RBP12.85□□□□□ -0.35
IGHV3-60-201ENST00000521678 RMDN1Q96DB5 314 aa12.85□□□□□ -0.35
IGHV3-60-201ENST00000521678 CCDC51Q96ER9 411 aa12.85□□□□□ -0.35
IGHV3-60-201ENST00000521678 CEP170P1Q96L14 293 aa12.85□□□□□ -0.35
IGHV3-60-201ENST00000521678 GAD1Q99259 594 aa12.85□□□□□ -0.35
IGHV3-60-201ENST00000521678 PRKD2Q9BZL6 878 aa12.85□□□□□ -0.35
IGHV3-60-201ENST00000521678 ZDHHC7Q9NXF8 308 aa12.85□□□□□ -0.35
IGHV3-60-201ENST00000521678 FNIP2Q9P278 1114 aa12.85□□□□□ -0.35
IGHV3-60-201ENST00000521678 DDX25Q9UHL0 483 aaKnown RBP12.85□□□□□ -0.35
IGHV3-60-201ENST00000521678 SIT1Q9Y3P8 196 aa12.85□□□□□ -0.35
IGHV3-60-201ENST00000521678 IPPQ9Y573 584 aa12.85□□□□□ -0.35
IGHV3-60-201ENST00000521678 F8W810 466 aa12.84□□□□□ -0.35
IGHV3-60-201ENST00000521678 STK25O00506 426 aa12.84□□□□□ -0.35
IGHV3-60-201ENST00000521678 TGM5O43548 720 aa12.84□□□□□ -0.35
IGHV3-60-201ENST00000521678 SLC37A4O43826 429 aa12.84□□□□□ -0.35
IGHV3-60-201ENST00000521678 SPATA31D3P0C874 917 aa12.84□□□□□ -0.35
IGHV3-60-201ENST00000521678 SP9P0CG40 484 aa12.84□□□□□ -0.35
IGHV3-60-201ENST00000521678 AXLP30530 894 aa12.84□□□□□ -0.35
IGHV3-60-201ENST00000521678 OR1G1P47890 313 aa12.84□□□□□ -0.35
IGHV3-60-201ENST00000521678 STARD6P59095 220 aa12.84□□□□□ -0.35
IGHV3-60-201ENST00000521678 EPHA7Q15375 998 aa12.84□□□□□ -0.35
IGHV3-60-201ENST00000521678 AMHR2Q16671 573 aa12.84□□□□□ -0.35
IGHV3-60-201ENST00000521678 PPP4R3AQ6IN85 833 aa12.84□□□□□ -0.35
IGHV3-60-201ENST00000521678 SPATA31D4Q6ZUB0 917 aa12.84□□□□□ -0.35
IGHV3-60-201ENST00000521678 SKAP1Q86WV1 359 aa12.84□□□□□ -0.35
IGHV3-60-201ENST00000521678 C1orf210Q8IVY1 113 aa12.84□□□□□ -0.35
IGHV3-60-201ENST00000521678 RNF149Q8NC42 400 aa12.84□□□□□ -0.35
IGHV3-60-201ENST00000521678 GPR152Q8TDT2 470 aa12.84□□□□□ -0.35
IGHV3-60-201ENST00000521678 TCP11Q8WWU5 503 aa12.84□□□□□ -0.35
IGHV3-60-201ENST00000521678 HAS1Q92839 578 aa12.84□□□□□ -0.35
IGHV3-60-201ENST00000521678 COLEC11Q9BWP8 271 aa12.84□□□□□ -0.35
IGHV3-60-201ENST00000521678 EIF2AQ9BY44 585 aaKnown RBP12.84□□□□□ -0.35
IGHV3-60-201ENST00000521678 GPR62Q9BZJ7 368 aa12.84□□□□□ -0.35
IGHV3-60-201ENST00000521678 CSRNP2Q9H175 543 aa12.84□□□□□ -0.35
IGHV3-60-201ENST00000521678 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.84□□□□□ -0.35
IGHV3-60-201ENST00000521678 CA14Q9ULX7 337 aa12.84□□□□□ -0.35
IGHV3-60-201ENST00000521678 GIT1Q9Y2X7 761 aa12.84□□□□□ -0.35
IGHV3-60-201ENST00000521678 ZFP37Q9Y6Q3 630 aaPredicted RBP12.84□□□□□ -0.35
IGHV3-60-201ENST00000521678 R4GN57 208 aa12.84□□□□□ -0.35
IGHV3-60-201ENST00000521678 ZBTB39O15060 712 aa12.83□□□□□ -0.36
IGHV3-60-201ENST00000521678 TBX3O15119 743 aa12.83□□□□□ -0.36
IGHV3-60-201ENST00000521678 TSPAN1O60635 241 aa12.83□□□□□ -0.36
IGHV3-60-201ENST00000521678 DEXIO95424 95 aa12.83□□□□□ -0.36
IGHV3-60-201ENST00000521678 GLULP15104 373 aa12.83□□□□□ -0.36
IGHV3-60-201ENST00000521678 PSMA5P28066 241 aa12.83□□□□□ -0.36
IGHV3-60-201ENST00000521678 SCNN1GP51170 649 aa12.83□□□□□ -0.36
IGHV3-60-201ENST00000521678 SSRP1Q08945 709 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms