RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 RHOBTB2Q9BYZ6 727 aa16.6■□□□□ 0.25
PRKDC-204ENST00000521331 BMP2KQ9NSY1 1161 aaPredicted RBP16.6■□□□□ 0.25
PRKDC-204ENST00000521331 PDRG1Q9NUG6 133 aa16.6■□□□□ 0.25
PRKDC-204ENST00000521331 PTPRZ1P23471 2315 aaPredicted RBP16.6■□□□□ 0.25
PRKDC-204ENST00000521331 STK36Q9NRP7 1315 aa16.6■□□□□ 0.25
PRKDC-204ENST00000521331 NR1I2O75469 434 aa16.59■□□□□ 0.25
PRKDC-204ENST00000521331 BAG4O95429 457 aaKnown RBP16.59■□□□□ 0.25
PRKDC-204ENST00000521331 OR1G1P47890 313 aa16.59■□□□□ 0.25
PRKDC-204ENST00000521331 AK2P54819 239 aa16.59■□□□□ 0.25
PRKDC-204ENST00000521331 XKR9Q5GH70 373 aa16.59■□□□□ 0.25
PRKDC-204ENST00000521331 NCAPH2Q6IBW4 605 aa16.59■□□□□ 0.25
PRKDC-204ENST00000521331 PIK3AP1Q6ZUJ8 805 aa16.59■□□□□ 0.25
PRKDC-204ENST00000521331 COLGALT2Q8IYK4 626 aa16.59■□□□□ 0.25
PRKDC-204ENST00000521331 SMG8Q8ND04 991 aaKnown RBP16.59■□□□□ 0.25
PRKDC-204ENST00000521331 FLCNQ8NFG4 579 aa16.59■□□□□ 0.25
PRKDC-204ENST00000521331 DYDC2Q96IM9 177 aa16.59■□□□□ 0.25
PRKDC-204ENST00000521331 KCNK12Q9HB15 430 aa16.59■□□□□ 0.25
PRKDC-204ENST00000521331 MAN1C1Q9NR34 630 aa16.59■□□□□ 0.25
PRKDC-204ENST00000521331 RGL1Q9NZL6 768 aa16.59■□□□□ 0.25
PRKDC-204ENST00000521331 IGSF9Q9P2J2 1179 aa16.59■□□□□ 0.25
PRKDC-204ENST00000521331 DUSP12Q9UNI6 340 aa16.59■□□□□ 0.25
PRKDC-204ENST00000521331 PRG3Q9Y2Y8 225 aaPredicted RBP16.59■□□□□ 0.25
PRKDC-204ENST00000521331 IPPQ9Y573 584 aa16.59■□□□□ 0.25
PRKDC-204ENST00000521331 MYO15AQ9UKN7 3530 aa16.59■□□□□ 0.25
PRKDC-204ENST00000521331 RIF1Q5UIP0 2472 aaKnown RBP16.58■□□□□ 0.25
PRKDC-204ENST00000521331 ARL5CA6NH57 179 aa16.58■□□□□ 0.24
PRKDC-204ENST00000521331 C2CD2LO14523 706 aa16.58■□□□□ 0.24
PRKDC-204ENST00000521331 TSPAN1O60635 241 aa16.58■□□□□ 0.24
PRKDC-204ENST00000521331 GLUD1P00367 558 aa16.58■□□□□ 0.24
PRKDC-204ENST00000521331 GLUD2P49448 558 aa16.58■□□□□ 0.24
PRKDC-204ENST00000521331 PTENP60484 403 aa16.58■□□□□ 0.24
PRKDC-204ENST00000521331 POU5F1BQ06416 359 aa16.58■□□□□ 0.24
PRKDC-204ENST00000521331 DSC1Q08554 894 aa16.58■□□□□ 0.24
PRKDC-204ENST00000521331 SCRN1Q12765 414 aa16.58■□□□□ 0.24
PRKDC-204ENST00000521331 TFDP1Q14186 410 aa16.58■□□□□ 0.24
PRKDC-204ENST00000521331 POTEDQ86YR6 584 aa16.58■□□□□ 0.24
PRKDC-204ENST00000521331 IFNLR1Q8IU57 520 aaPredicted RBP16.58■□□□□ 0.24
PRKDC-204ENST00000521331 HACE1Q8IYU2 909 aa16.58■□□□□ 0.24
PRKDC-204ENST00000521331 FEZF2Q8TBJ5 459 aa16.58■□□□□ 0.24
PRKDC-204ENST00000521331 STAMQ92783 540 aa16.58■□□□□ 0.24
PRKDC-204ENST00000521331 SNX27Q96L92 541 aa16.58■□□□□ 0.24
PRKDC-204ENST00000521331 MARCH5Q9NX47 278 aa16.58■□□□□ 0.24
PRKDC-204ENST00000521331 FBXL21Q9UKT6 434 aa16.58■□□□□ 0.24
PRKDC-204ENST00000521331 MYO10Q9HD67 2058 aa16.57■□□□□ 0.24
PRKDC-204ENST00000521331 PRR23AA6NEV1 266 aa16.57■□□□□ 0.24
PRKDC-204ENST00000521331 TEX28O15482 410 aa16.57■□□□□ 0.24
PRKDC-204ENST00000521331 C1RP00736 705 aa16.57■□□□□ 0.24
PRKDC-204ENST00000521331 AOC1P19801 751 aa16.57■□□□□ 0.24
PRKDC-204ENST00000521331 MLH1P40692 756 aa16.57■□□□□ 0.24
PRKDC-204ENST00000521331 CYP4A11Q02928 519 aa16.57■□□□□ 0.24
PRKDC-204ENST00000521331 SPIRE1Q08AE8 756 aa16.57■□□□□ 0.24
PRKDC-204ENST00000521331 CTTNQ14247 550 aaKnown RBP16.57■□□□□ 0.24
PRKDC-204ENST00000521331 CWF19L1Q69YN2 538 aaKnown RBP16.57■□□□□ 0.24
PRKDC-204ENST00000521331 TPH2Q8IWU9 490 aa16.57■□□□□ 0.24
PRKDC-204ENST00000521331 RNF168Q8IYW5 571 aaPredicted RBP16.57■□□□□ 0.24
PRKDC-204ENST00000521331 HDAC7Q8WUI4 952 aa16.57■□□□□ 0.24
PRKDC-204ENST00000521331 WASF1Q92558 559 aa16.57■□□□□ 0.24
PRKDC-204ENST00000521331 GAD1Q99259 594 aa16.57■□□□□ 0.24
PRKDC-204ENST00000521331 RTP3Q9BQQ7 232 aa16.57■□□□□ 0.24
PRKDC-204ENST00000521331 EIF2AQ9BY44 585 aaKnown RBP16.57■□□□□ 0.24
PRKDC-204ENST00000521331 CSRNP2Q9H175 543 aa16.57■□□□□ 0.24
PRKDC-204ENST00000521331 RXFP1Q9HBX9 757 aa16.57■□□□□ 0.24
PRKDC-204ENST00000521331 WDR6Q9NNW5 1121 aaKnown RBP16.57■□□□□ 0.24
PRKDC-204ENST00000521331 GIT1Q9Y2X7 761 aa16.57■□□□□ 0.24
PRKDC-204ENST00000521331 CCDC195A0A1B0GUA6 201 aa16.56■□□□□ 0.24
PRKDC-204ENST00000521331 INO80B-WBP1J3KQ70 363 aa16.56■□□□□ 0.24
PRKDC-204ENST00000521331 DGAT1O75907 488 aa16.56■□□□□ 0.24
PRKDC-204ENST00000521331 SLITRK3O94933 977 aa16.56■□□□□ 0.24
PRKDC-204ENST00000521331 LYPLA2O95372 231 aa16.56■□□□□ 0.24
PRKDC-204ENST00000521331 EFEMP2O95967 443 aa16.56■□□□□ 0.24
PRKDC-204ENST00000521331 DSG1Q02413 1049 aa16.56■□□□□ 0.24
PRKDC-204ENST00000521331 KIAA0319Q5VV43 1072 aa16.56■□□□□ 0.24
PRKDC-204ENST00000521331 ASCL5Q7RTU5 278 aa16.56■□□□□ 0.24
PRKDC-204ENST00000521331 TAS1R1Q7RTX1 841 aa16.56■□□□□ 0.24
PRKDC-204ENST00000521331 GPR65Q8IYL9 337 aa16.56■□□□□ 0.24
PRKDC-204ENST00000521331 OXER1Q8TDS5 423 aa16.56■□□□□ 0.24
PRKDC-204ENST00000521331 CPB2Q96IY4 423 aa16.56■□□□□ 0.24
PRKDC-204ENST00000521331 COLEC11Q9BWP8 271 aa16.56■□□□□ 0.24
PRKDC-204ENST00000521331 TRIM6Q9C030 488 aaPredicted RBP16.56■□□□□ 0.24
PRKDC-204ENST00000521331 RNF39Q9H2S5 420 aa16.56■□□□□ 0.24
PRKDC-204ENST00000521331 BRMS1Q9HCU9 246 aa16.56■□□□□ 0.24
PRKDC-204ENST00000521331 XPNPEP1Q9NQW7 623 aa16.56■□□□□ 0.24
PRKDC-204ENST00000521331 DMDP11532 3685 aa16.56■□□□□ 0.24
PRKDC-204ENST00000521331 CLUHO75153 1309 aa16.55■□□□□ 0.24
PRKDC-204ENST00000521331 ZBTB39O15060 712 aa16.55■□□□□ 0.24
PRKDC-204ENST00000521331 PFKFB2O60825 505 aa16.55■□□□□ 0.24
PRKDC-204ENST00000521331 NPR3P17342 541 aa16.55■□□□□ 0.24
PRKDC-204ENST00000521331 GBP2P32456 591 aaPredicted RBP16.55■□□□□ 0.24
PRKDC-204ENST00000521331 SCNN1GP51170 649 aa16.55■□□□□ 0.24
PRKDC-204ENST00000521331 MBTD1Q05BQ5 628 aa16.55■□□□□ 0.24
PRKDC-204ENST00000521331 SIX5Q8N196 739 aa16.55■□□□□ 0.24
PRKDC-204ENST00000521331 NKD2Q969F2 451 aaPredicted RBP16.55■□□□□ 0.24
PRKDC-204ENST00000521331 NXPE3Q969Y0 559 aa16.55■□□□□ 0.24
PRKDC-204ENST00000521331 CCDC43Q96MW1 224 aaKnown RBP16.55■□□□□ 0.24
PRKDC-204ENST00000521331 EIF2AK1Q9BQI3 630 aaKnown RBP16.55■□□□□ 0.24
PRKDC-204ENST00000521331 NFKBIZQ9BYH8 718 aa16.55■□□□□ 0.24
PRKDC-204ENST00000521331 PLEKHA4Q9H4M7 779 aa16.55■□□□□ 0.24
PRKDC-204ENST00000521331 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.55■□□□□ 0.24
PRKDC-204ENST00000521331 CHST7Q9NS84 486 aa16.55■□□□□ 0.24
PRKDC-204ENST00000521331 ANKEF1Q9NU02 776 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms