RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 DDX53Q86TM3 631 aaKnown RBP18.87■□□□□ 0.61
SQLE-205ENST00000521232 ZBTB8OSQ8IWT0 167 aa18.87■□□□□ 0.61
SQLE-205ENST00000521232 VN1R2Q8NFZ6 395 aa18.87■□□□□ 0.61
SQLE-205ENST00000521232 BSNDQ8WZ55 320 aa18.87■□□□□ 0.61
SQLE-205ENST00000521232 TMEM175Q9BSA9 504 aa18.87■□□□□ 0.61
SQLE-205ENST00000521232 MMTAG2Q9BU76 263 aaKnown RBP18.87■□□□□ 0.61
SQLE-205ENST00000521232 C2orf40Q9H1Z8 148 aa18.87■□□□□ 0.61
SQLE-205ENST00000521232 DNM3Q9UQ16 869 aa18.87■□□□□ 0.61
SQLE-205ENST00000521232 C2orf71A6NGG8 1288 aa18.86■□□□□ 0.61
SQLE-205ENST00000521232 C19orf67A6NJJ6 358 aa18.86■□□□□ 0.61
SQLE-205ENST00000521232 PP2D1A8MPX8 630 aa18.86■□□□□ 0.61
SQLE-205ENST00000521232 POMCP01189 267 aa18.86■□□□□ 0.61
SQLE-205ENST00000521232 CDC25AP30304 524 aa18.86■□□□□ 0.61
SQLE-205ENST00000521232 BMS1Q14692 1282 aaKnown RBP18.86■□□□□ 0.61
SQLE-205ENST00000521232 PPP2R5AQ15172 486 aa18.86■□□□□ 0.61
SQLE-205ENST00000521232 ADHFE1Q8IWW8 467 aa18.86■□□□□ 0.61
SQLE-205ENST00000521232 VPS52Q8N1B4 723 aa18.86■□□□□ 0.61
SQLE-205ENST00000521232 SMRP1Q8NCR6 262 aa18.86■□□□□ 0.61
SQLE-205ENST00000521232 KIFAP3Q92845 792 aa18.86■□□□□ 0.61
SQLE-205ENST00000521232 FAM193BQ96PV7 902 aaPredicted RBP18.86■□□□□ 0.61
SQLE-205ENST00000521232 TRIM6Q9C030 488 aaPredicted RBP18.86■□□□□ 0.61
SQLE-205ENST00000521232 GBP3Q9H0R5 595 aa18.86■□□□□ 0.61
SQLE-205ENST00000521232 BARX2Q9UMQ3 279 aaPredicted RBP18.86■□□□□ 0.61
SQLE-205ENST00000521232 GIT1Q9Y2X7 761 aa18.86■□□□□ 0.61
SQLE-205ENST00000521232 HES2Q9Y543 173 aa18.86■□□□□ 0.61
SQLE-205ENST00000521232 IRAK3Q9Y616 596 aa18.86■□□□□ 0.61
SQLE-205ENST00000521232 ARL5CA6NH57 179 aa18.85■□□□□ 0.61
SQLE-205ENST00000521232 E9PMD0 336 aa18.85■□□□□ 0.61
SQLE-205ENST00000521232 CXCL14O95715 111 aa18.85■□□□□ 0.61
SQLE-205ENST00000521232 RBM10P98175 930 aaKnown RBP18.85■□□□□ 0.61
SQLE-205ENST00000521232 ZP2Q05996 745 aa18.85■□□□□ 0.61
SQLE-205ENST00000521232 ARL6IP4Q66PJ3 421 aaKnown RBP18.85■□□□□ 0.61
SQLE-205ENST00000521232 CDR2LQ86X02 465 aaPredicted RBP18.85■□□□□ 0.61
SQLE-205ENST00000521232 HACE1Q8IYU2 909 aa18.85■□□□□ 0.61
SQLE-205ENST00000521232 KCTD17Q8N5Z5 321 aa18.85■□□□□ 0.61
SQLE-205ENST00000521232 BCL7CQ8WUZ0 217 aaPredicted RBP18.85■□□□□ 0.61
SQLE-205ENST00000521232 KHSRPQ92945 711 aaKnown RBP eCLIP18.85■□□□□ 0.615e-6■□□□□ 9.3
SQLE-205ENST00000521232 GAD1Q99259 594 aa18.85■□□□□ 0.61
SQLE-205ENST00000521232 ZBP1Q9H171 429 aa18.85■□□□□ 0.61
SQLE-205ENST00000521232 EPHX3Q9H6B9 360 aa18.85■□□□□ 0.61
SQLE-205ENST00000521232 POLD4Q9HCU8 107 aa18.85■□□□□ 0.61
SQLE-205ENST00000521232 MIOSQ9NXC5 875 aa18.85■□□□□ 0.61
SQLE-205ENST00000521232 STK39Q9UEW8 545 aa18.85■□□□□ 0.61
SQLE-205ENST00000521232 FAN1Q9Y2M0 1017 aa18.85■□□□□ 0.61
SQLE-205ENST00000521232 ACKR2O00590 384 aa18.84■□□□□ 0.61
SQLE-205ENST00000521232 NRP1O14786 923 aa18.84■□□□□ 0.61
SQLE-205ENST00000521232 NPTXRO95502 500 aa18.84■□□□□ 0.61
SQLE-205ENST00000521232 CTSAP10619 480 aa18.84■□□□□ 0.61
SQLE-205ENST00000521232 GIT2Q14161 759 aa18.84■□□□□ 0.61
SQLE-205ENST00000521232 MAPK6Q16659 721 aa18.84■□□□□ 0.61
SQLE-205ENST00000521232 HYIQ5T013 277 aa18.84■□□□□ 0.61
SQLE-205ENST00000521232 COLGALT2Q8IYK4 626 aa18.84■□□□□ 0.61
SQLE-205ENST00000521232 DEPTORQ8TB45 409 aa18.84■□□□□ 0.61
SQLE-205ENST00000521232 IFT74Q96LB3 600 aa18.84■□□□□ 0.61
SQLE-205ENST00000521232 CCDC113Q9H0I3 377 aa18.84■□□□□ 0.61
SQLE-205ENST00000521232 NXF3Q9H4D5 531 aaKnown RBP18.84■□□□□ 0.61
SQLE-205ENST00000521232 DAXXQ9UER7 740 aaPredicted RBP18.84■□□□□ 0.61
SQLE-205ENST00000521232 TDRD15B5MCY1 1934 aaKnown RBP18.84■□□□□ 0.61
SQLE-205ENST00000521232 TRIOO75962 3097 aa18.83■□□□□ 0.61
SQLE-205ENST00000521232 TTLL13PA6NNM8 815 aa18.83■□□□□ 0.6
SQLE-205ENST00000521232 PI4K2BG5E9Z4 385 aa18.83■□□□□ 0.6
SQLE-205ENST00000521232 SRGAP2BP0DMP2 458 aa18.83■□□□□ 0.6
SQLE-205ENST00000521232 SSTR3P32745 418 aaPredicted RBP18.83■□□□□ 0.6
SQLE-205ENST00000521232 MLH1P40692 756 aa18.83■□□□□ 0.6
SQLE-205ENST00000521232 EFNA5P52803 228 aa18.83■□□□□ 0.6
SQLE-205ENST00000521232 DSC1Q08554 894 aa18.83■□□□□ 0.6
SQLE-205ENST00000521232 PRPF4BQ13523 1007 aaKnown RBP18.83■□□□□ 0.6
SQLE-205ENST00000521232 KCNK18Q7Z418 384 aa18.83■□□□□ 0.6
SQLE-205ENST00000521232 GSTCDQ8NEC7 633 aa18.83■□□□□ 0.6
SQLE-205ENST00000521232 ZFP42Q96MM3 310 aa18.83■□□□□ 0.6
SQLE-205ENST00000521232 APOL6Q9BWW8 343 aa18.83■□□□□ 0.6
SQLE-205ENST00000521232 VN1R3Q9BXE9 311 aa18.83■□□□□ 0.6
SQLE-205ENST00000521232 C1QTNF1Q9BXJ1 281 aa18.83■□□□□ 0.6
SQLE-205ENST00000521232 ZMYM2Q9UBW7 1377 aa18.82■□□□□ 0.6
SQLE-205ENST00000521232 VWA3AA6NCI4 1184 aa18.82■□□□□ 0.6
SQLE-205ENST00000521232 N4BP3O15049 544 aa18.82■□□□□ 0.6
SQLE-205ENST00000521232 CLASP2O75122 1294 aaKnown RBP18.82■□□□□ 0.6
SQLE-205ENST00000521232 PRKCBP05771 671 aa18.82■□□□□ 0.6
SQLE-205ENST00000521232 AKAP5P24588 427 aa18.82■□□□□ 0.6
SQLE-205ENST00000521232 SCNN1GP51170 649 aa18.82■□□□□ 0.6
SQLE-205ENST00000521232 RINT1Q6NUQ1 792 aa18.82■□□□□ 0.6
SQLE-205ENST00000521232 ANKRD54Q6NXT1 300 aa18.82■□□□□ 0.6
SQLE-205ENST00000521232 C1orf186Q6ZWK4 172 aa18.82■□□□□ 0.6
SQLE-205ENST00000521232 BRAPQ7Z569 592 aa18.82■□□□□ 0.6
SQLE-205ENST00000521232 PNMA5Q96PV4 448 aa18.82■□□□□ 0.6
SQLE-205ENST00000521232 POP1Q99575 1024 aaKnown RBP18.82■□□□□ 0.6
SQLE-205ENST00000521232 S1PR5Q9H228 398 aa18.82■□□□□ 0.6
SQLE-205ENST00000521232 PDZD7Q9H5P4 517 aa18.82■□□□□ 0.6
SQLE-205ENST00000521232 EDN1P05305 212 aa18.81■□□□□ 0.6
SQLE-205ENST00000521232 HOXB8P17481 243 aaPredicted RBP18.81■□□□□ 0.6
SQLE-205ENST00000521232 LLGL2Q6P1M3 1020 aa18.81■□□□□ 0.6
SQLE-205ENST00000521232 SYCE2Q6PIF2 218 aa18.81■□□□□ 0.6
SQLE-205ENST00000521232 DAW1Q8N136 415 aa18.81■□□□□ 0.6
SQLE-205ENST00000521232 AUTS2Q8WXX7 1259 aa18.81■□□□□ 0.6
SQLE-205ENST00000521232 SUSD6Q92537 303 aa18.81■□□□□ 0.6
SQLE-205ENST00000521232 CASP10Q92851 521 aa18.81■□□□□ 0.6
SQLE-205ENST00000521232 KIFC3Q9BVG8 833 aa18.81■□□□□ 0.6
SQLE-205ENST00000521232 NT5C3AQ9H0P0 336 aa18.81■□□□□ 0.6
SQLE-205ENST00000521232 PARP2Q9UGN5 583 aa18.81■□□□□ 0.6
SQLE-205ENST00000521232 USP15Q9Y4E8 981 aaPredicted RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms