RNA–Protein interactions for RNA: ENST00000520957.1

CLK4-208, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-208ENST00000520957 LMBRD1Q9NUN5 540 aa13.61□□□□□ -0.23
CLK4-208ENST00000520957 HCSTQ9UBK5 93 aa13.61□□□□□ -0.23
CLK4-208ENST00000520957 USP25Q9UHP3 1055 aa13.61□□□□□ -0.23
CLK4-208ENST00000520957 CNTNAP2Q9UHC6 1331 aa13.61□□□□□ -0.23
CLK4-208ENST00000520957 GAP43P17677 238 aa13.6□□□□□ -0.23
CLK4-208ENST00000520957 AXLP30530 894 aa13.6□□□□□ -0.23
CLK4-208ENST00000520957 FXR1P51114 621 aaKnown RBP eCLIP13.6□□□□□ -0.23
CLK4-208ENST00000520957 UBE2HP62256 183 aa13.6□□□□□ -0.23
CLK4-208ENST00000520957 HTRA4P83105 476 aaPredicted RBP13.6□□□□□ -0.23
CLK4-208ENST00000520957 SMAD3P84022 425 aaKnown RBP13.6□□□□□ -0.23
CLK4-208ENST00000520957 GTF2BQ00403 316 aa13.6□□□□□ -0.23
CLK4-208ENST00000520957 PNOCQ13519 176 aa13.6□□□□□ -0.23
CLK4-208ENST00000520957 PCBP1Q15365 356 aaKnown RBP eCLIP13.6□□□□□ -0.23
CLK4-208ENST00000520957 TMEM132AQ24JP5 1023 aa13.6□□□□□ -0.23
CLK4-208ENST00000520957 PAN2Q504Q3 1202 aaKnown RBP13.6□□□□□ -0.23
CLK4-208ENST00000520957 ATF7IP2Q5U623 682 aa13.6□□□□□ -0.23
CLK4-208ENST00000520957 AGMOQ6ZNB7 445 aa13.6□□□□□ -0.23
CLK4-208ENST00000520957 UNC13DQ70J99 1090 aa13.6□□□□□ -0.23
CLK4-208ENST00000520957 ZBTB33Q86T24 672 aa13.6□□□□□ -0.23
CLK4-208ENST00000520957 ZNF689Q96CS4 500 aaPredicted RBP13.6□□□□□ -0.23
CLK4-208ENST00000520957 YME1L1Q96TA2 773 aa13.6□□□□□ -0.23
CLK4-208ENST00000520957 HAPLN2Q9GZV7 340 aa13.6□□□□□ -0.23
CLK4-208ENST00000520957 CXCL16Q9H2A7 254 aa13.6□□□□□ -0.23
CLK4-208ENST00000520957 NXF3Q9H4D5 531 aaKnown RBP13.6□□□□□ -0.23
CLK4-208ENST00000520957 PTPRHQ9HD43 1115 aa13.6□□□□□ -0.23
CLK4-208ENST00000520957 TMEM161AQ9NX61 479 aa13.6□□□□□ -0.23
CLK4-208ENST00000520957 LRFN2Q9ULH4 789 aa13.6□□□□□ -0.23
CLK4-208ENST00000520957 IPPQ9Y573 584 aa13.6□□□□□ -0.23
CLK4-208ENST00000520957 PHLPP2Q6ZVD8 1323 aa13.6□□□□□ -0.23
CLK4-208ENST00000520957 ANKRD63C9JTQ0 380 aa13.59□□□□□ -0.23
CLK4-208ENST00000520957 ABLIM1O14639 778 aa13.59□□□□□ -0.23
CLK4-208ENST00000520957 GTPBP6O43824 516 aaPredicted RBP13.59□□□□□ -0.23
CLK4-208ENST00000520957 ZNF623O75123 536 aa13.59□□□□□ -0.23
CLK4-208ENST00000520957 PPP1R37O75864 691 aa13.59□□□□□ -0.23
CLK4-208ENST00000520957 PRPF6O94906 941 aaKnown RBP13.59□□□□□ -0.23
CLK4-208ENST00000520957 GCNT3O95395 438 aa13.59□□□□□ -0.23
CLK4-208ENST00000520957 AKAP5P24588 427 aa13.59□□□□□ -0.23
CLK4-208ENST00000520957 HOXD13P35453 343 aa13.59□□□□□ -0.23
CLK4-208ENST00000520957 EHHADHQ08426 723 aa13.59□□□□□ -0.23
CLK4-208ENST00000520957 DPYDQ12882 1025 aa13.59□□□□□ -0.23
CLK4-208ENST00000520957 STRN3Q13033 797 aa13.59□□□□□ -0.23
CLK4-208ENST00000520957 KMT5BQ4FZB7 885 aa13.59□□□□□ -0.23
CLK4-208ENST00000520957 SEZ6Q53EL9 994 aa13.59□□□□□ -0.23
CLK4-208ENST00000520957 CLLU1OSQ5K130 101 aa13.59□□□□□ -0.23
CLK4-208ENST00000520957 SLC39A4Q6P5W5 647 aa13.59□□□□□ -0.23
CLK4-208ENST00000520957 SLC27A1Q6PCB7 646 aa13.59□□□□□ -0.23
CLK4-208ENST00000520957 MRPL10Q7Z7H8 261 aaKnown RBP13.59□□□□□ -0.23
CLK4-208ENST00000520957 CEP120Q8N960 986 aa13.59□□□□□ -0.23
CLK4-208ENST00000520957 APOL6Q9BWW8 343 aa13.59□□□□□ -0.23
CLK4-208ENST00000520957 MRPL4Q9BYD3 311 aaKnown RBP13.59□□□□□ -0.23
CLK4-208ENST00000520957 CERS4Q9HA82 394 aa13.59□□□□□ -0.23
CLK4-208ENST00000520957 RC3H2Q9HBD1 1191 aaKnown RBP13.59□□□□□ -0.23
CLK4-208ENST00000520957 SLC39A2Q9NP94 309 aa13.59□□□□□ -0.23
CLK4-208ENST00000520957 OLFML3Q9NRN5 406 aa13.59□□□□□ -0.23
CLK4-208ENST00000520957 PCDHA11Q9Y5I1 949 aa13.59□□□□□ -0.23
CLK4-208ENST00000520957 STAG3L1P0CL83 205 aa13.59□□□□□ -0.23
CLK4-208ENST00000520957 STK4Q13043 487 aa13.59□□□□□ -0.23
CLK4-208ENST00000520957 TMEM192Q8IY95 271 aa13.59□□□□□ -0.23
CLK4-208ENST00000520957 HELQQ8TDG4 1101 aa13.59□□□□□ -0.23
CLK4-208ENST00000520957 FAM161BQ96MY7 647 aa13.59□□□□□ -0.23
CLK4-208ENST00000520957 TCHPQ9BT92 498 aa13.59□□□□□ -0.23
CLK4-208ENST00000520957 TTYH1Q9H313 450 aaPredicted RBP13.59□□□□□ -0.23
CLK4-208ENST00000520957 ST6GALNAC4Q9H4F1 302 aa13.59□□□□□ -0.23
CLK4-208ENST00000520957 ELAC1Q9H777 363 aaKnown RBP13.59□□□□□ -0.23
CLK4-208ENST00000520957 SEL1LQ9UBV2 794 aa13.59□□□□□ -0.23
CLK4-208ENST00000520957 KCNG1Q9UIX4 513 aa13.59□□□□□ -0.23
CLK4-208ENST00000520957 TNFSF13BQ9Y275 285 aa13.59□□□□□ -0.23
CLK4-208ENST00000520957 INSL6Q9Y581 213 aa13.59□□□□□ -0.23
CLK4-208ENST00000520957 PVALEFA0A1B0GWK0 134 aa13.58□□□□□ -0.24
CLK4-208ENST00000520957 TBKBP1A7MCY6 615 aa13.58□□□□□ -0.24
CLK4-208ENST00000520957 EOMESO95936 686 aa13.58□□□□□ -0.24
CLK4-208ENST00000520957 RPN1P04843 607 aaKnown RBP13.58□□□□□ -0.24
CLK4-208ENST00000520957 HARSP12081 509 aaKnown RBP13.58□□□□□ -0.24
CLK4-208ENST00000520957 PROZP22891 400 aa13.58□□□□□ -0.24
CLK4-208ENST00000520957 OSTNP61366 133 aa13.58□□□□□ -0.24
CLK4-208ENST00000520957 TAP1Q03518 808 aa13.58□□□□□ -0.24
CLK4-208ENST00000520957 POSTNQ15063 836 aa13.58□□□□□ -0.24
CLK4-208ENST00000520957 LRRC55Q6ZSA7 311 aa13.58□□□□□ -0.24
CLK4-208ENST00000520957 Q7L0L9 218 aa13.58□□□□□ -0.24
CLK4-208ENST00000520957 TIFAQ96CG3 184 aa13.58□□□□□ -0.24
CLK4-208ENST00000520957 CASD1Q96PB1 797 aa13.58□□□□□ -0.24
CLK4-208ENST00000520957 TRIM6Q9C030 488 aaPredicted RBP13.58□□□□□ -0.24
CLK4-208ENST00000520957 CDT1Q9H211 546 aa13.58□□□□□ -0.24
CLK4-208ENST00000520957 SNTG2Q9NY99 539 aa13.58□□□□□ -0.24
CLK4-208ENST00000520957 KLK14Q9P0G3 267 aa13.58□□□□□ -0.24
CLK4-208ENST00000520957 MSRAQ9UJ68 235 aa13.58□□□□□ -0.24
CLK4-208ENST00000520957 MTUS1Q9ULD2 1270 aa13.58□□□□□ -0.24
CLK4-208ENST00000520957 TTC3P53804 2025 aa13.58□□□□□ -0.24
CLK4-208ENST00000520957 LINC01553A4QN01 128 aa13.57□□□□□ -0.24
CLK4-208ENST00000520957 N4BP3O15049 544 aa13.57□□□□□ -0.24
CLK4-208ENST00000520957 OFD1O75665 1012 aa13.57□□□□□ -0.24
CLK4-208ENST00000520957 LINC00271P0C7V0 271 aa13.57□□□□□ -0.24
CLK4-208ENST00000520957 ADSSP30520 456 aa13.57□□□□□ -0.24
CLK4-208ENST00000520957 BTG3Q14201 252 aaPredicted RBP13.57□□□□□ -0.24
CLK4-208ENST00000520957 CAMK4Q16566 473 aa13.57□□□□□ -0.24
CLK4-208ENST00000520957 FAM26FQ5R3K3 315 aa13.57□□□□□ -0.24
CLK4-208ENST00000520957 EPM2AIP1Q7L775 607 aaPredicted RBP13.57□□□□□ -0.24
CLK4-208ENST00000520957 MAP4K3Q8IVH8 894 aa13.57□□□□□ -0.24
CLK4-208ENST00000520957 KIAA0895Q8NCT3 520 aa13.57□□□□□ -0.24
CLK4-208ENST00000520957 SP7Q8TDD2 431 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms