RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 TMX1Q9H3N1 280 aa20.03■□□□□ 0.8
VEGFA-222ENST00000520948 SERTAD1Q9UHV2 236 aa20.03■□□□□ 0.8
VEGFA-222ENST00000520948 ST3GAL5Q9UNP4 418 aa20.03■□□□□ 0.8
VEGFA-222ENST00000520948 MYH11P35749 1972 aa20.03■□□□□ 0.8
VEGFA-222ENST00000520948 GPR182O15218 404 aa20.02■□□□□ 0.8
VEGFA-222ENST00000520948 SLFN14P0C7P3 912 aa20.02■□□□□ 0.8
VEGFA-222ENST00000520948 GATMP50440 423 aa20.02■□□□□ 0.8
VEGFA-222ENST00000520948 PAK2Q13177 524 aa20.02■□□□□ 0.8
VEGFA-222ENST00000520948 PPP2R5AQ15172 486 aa20.02■□□□□ 0.8
VEGFA-222ENST00000520948 LONRF3Q496Y0 759 aa20.02■□□□□ 0.8
VEGFA-222ENST00000520948 ODR4Q5SWX8 454 aa20.02■□□□□ 0.8
VEGFA-222ENST00000520948 CDCA2Q69YH5 1023 aaPredicted RBP20.02■□□□□ 0.8
VEGFA-222ENST00000520948 CNNM4Q6P4Q7 775 aa20.02■□□□□ 0.8
VEGFA-222ENST00000520948 ADHFE1Q8IWW8 467 aa20.02■□□□□ 0.8
VEGFA-222ENST00000520948 ENGASEQ8NFI3 743 aa20.02■□□□□ 0.8
VEGFA-222ENST00000520948 DDX12PQ92771 950 aa20.02■□□□□ 0.8
VEGFA-222ENST00000520948 MAGEF1Q9HAY2 307 aa20.02■□□□□ 0.8
VEGFA-222ENST00000520948 PRKAG3Q9UGI9 489 aa20.02■□□□□ 0.8
VEGFA-222ENST00000520948 USP25Q9UHP3 1055 aa20.02■□□□□ 0.8
VEGFA-222ENST00000520948 PLAGL2Q9UPG8 496 aa20.02■□□□□ 0.8
VEGFA-222ENST00000520948 PLXNA4Q9HCM2 1894 aa20.02■□□□□ 0.8
VEGFA-222ENST00000520948 NCK2O43639 380 aa20.01■□□□□ 0.79
VEGFA-222ENST00000520948 GADD45BO75293 160 aaPredicted RBP20.01■□□□□ 0.79
VEGFA-222ENST00000520948 PLS3P13797 630 aa20.01■□□□□ 0.79
VEGFA-222ENST00000520948 FGFR4P22455 802 aa20.01■□□□□ 0.79
VEGFA-222ENST00000520948 DNAJB1P25685 340 aa20.01■□□□□ 0.79
VEGFA-222ENST00000520948 SYKP43405 635 aa20.01■□□□□ 0.79
VEGFA-222ENST00000520948 PHKA2P46019 1235 aa20.01■□□□□ 0.79
VEGFA-222ENST00000520948 NPTX2P47972 431 aa20.01■□□□□ 0.79
VEGFA-222ENST00000520948 CACNB1Q02641 598 aaPredicted RBP20.01■□□□□ 0.79
VEGFA-222ENST00000520948 CAMK1Q14012 370 aa20.01■□□□□ 0.79
VEGFA-222ENST00000520948 DSC3Q14574 896 aa20.01■□□□□ 0.79
VEGFA-222ENST00000520948 NPAS4Q8IUM7 802 aa20.01■□□□□ 0.79
VEGFA-222ENST00000520948 CMTR2Q8IYT2 770 aaKnown RBP20.01■□□□□ 0.79
VEGFA-222ENST00000520948 STAMQ92783 540 aa20.01■□□□□ 0.79
VEGFA-222ENST00000520948 IFT74Q96LB3 600 aa20.01■□□□□ 0.79
VEGFA-222ENST00000520948 SCLT1Q96NL6 688 aa20.01■□□□□ 0.79
VEGFA-222ENST00000520948 PLVAPQ9BX97 442 aa20.01■□□□□ 0.79
VEGFA-222ENST00000520948 FTHL17Q9BXU8 183 aa20.01■□□□□ 0.79
VEGFA-222ENST00000520948 C5orf42Q9H799 3197 aa20.01■□□□□ 0.79
VEGFA-222ENST00000520948 GOLGA6L4A6NEF3 574 aa20■□□□□ 0.79
VEGFA-222ENST00000520948 C19orf67A6NJJ6 358 aa20■□□□□ 0.79
VEGFA-222ENST00000520948 MBTPS2O43462 519 aa20■□□□□ 0.79
VEGFA-222ENST00000520948 ZNF202O95125 648 aa20■□□□□ 0.79
VEGFA-222ENST00000520948 ITGB1P05556 798 aa20■□□□□ 0.79
VEGFA-222ENST00000520948 IRS1P35568 1242 aa20■□□□□ 0.79
VEGFA-222ENST00000520948 PEX3P56589 373 aa20■□□□□ 0.79
VEGFA-222ENST00000520948 MBTD1Q05BQ5 628 aa20■□□□□ 0.79
VEGFA-222ENST00000520948 NFX1Q12986 1120 aaKnown RBP20■□□□□ 0.79
VEGFA-222ENST00000520948 SNW1Q13573 536 aaKnown RBP20■□□□□ 0.79
VEGFA-222ENST00000520948 PCBP1Q15365 356 aaKnown RBP eCLIP20■□□□□ 0.794e-7■■□□□ 11.7
VEGFA-222ENST00000520948 SMAD2Q15796 467 aaKnown RBP20■□□□□ 0.79
VEGFA-222ENST00000520948 DYMQ7RTS9 669 aa20■□□□□ 0.79
VEGFA-222ENST00000520948 FMR1NBQ8N0W7 255 aaPredicted RBP20■□□□□ 0.79
VEGFA-222ENST00000520948 CRIPAKQ8N1N5 446 aa20■□□□□ 0.79
VEGFA-222ENST00000520948 SPIRE2Q8WWL2 714 aa20■□□□□ 0.79
VEGFA-222ENST00000520948 KCNN1Q92952 543 aa20■□□□□ 0.79
VEGFA-222ENST00000520948 FIZ1Q96SL8 496 aa20■□□□□ 0.79
VEGFA-222ENST00000520948 C7orf25Q9BPX7 421 aa20■□□□□ 0.79
VEGFA-222ENST00000520948 LRRC27Q9C0I9 530 aa20■□□□□ 0.79
VEGFA-222ENST00000520948 CCDC113Q9H0I3 377 aa20■□□□□ 0.79
VEGFA-222ENST00000520948 FZD8Q9H461 694 aa20■□□□□ 0.79
VEGFA-222ENST00000520948 KCNG1Q9UIX4 513 aa20■□□□□ 0.79
VEGFA-222ENST00000520948 FRMD3A2A2Y4 597 aa19.99■□□□□ 0.79
VEGFA-222ENST00000520948 LRRIQ4A6NIV6 560 aa19.99■□□□□ 0.79
VEGFA-222ENST00000520948 MGEA5O60502 916 aa19.99■□□□□ 0.79
VEGFA-222ENST00000520948 AMPD3Q01432 767 aa19.99■□□□□ 0.79
VEGFA-222ENST00000520948 AMHR2Q16671 573 aa19.99■□□□□ 0.79
VEGFA-222ENST00000520948 FAM187BQ17R55 369 aa19.99■□□□□ 0.79
VEGFA-222ENST00000520948 ADGRD2Q7Z7M1 963 aa19.99■□□□□ 0.79
VEGFA-222ENST00000520948 KLHL23Q8NBE8 558 aa19.99■□□□□ 0.79
VEGFA-222ENST00000520948 P2RX5Q93086 422 aa19.99■□□□□ 0.79
VEGFA-222ENST00000520948 TRIM9Q9C026 710 aa19.99■□□□□ 0.79
VEGFA-222ENST00000520948 LARSQ9P2J5 1176 aaKnown RBP19.99■□□□□ 0.79
VEGFA-222ENST00000520948 ARHGAP28Q9P2N2 729 aa19.99■□□□□ 0.79
VEGFA-222ENST00000520948 KRT18P05783 430 aaKnown RBP19.98■□□□□ 0.79
VEGFA-222ENST00000520948 STAG3L1P0CL83 205 aa19.98■□□□□ 0.79
VEGFA-222ENST00000520948 SFPQP23246 707 aaKnown RBP eCLIP19.98■□□□□ 0.79
VEGFA-222ENST00000520948 HOXA11P31270 313 aaPredicted RBP19.98■□□□□ 0.79
VEGFA-222ENST00000520948 NDUFV1P49821 464 aa19.98■□□□□ 0.79
VEGFA-222ENST00000520948 NCKAP1LP55160 1127 aa19.98■□□□□ 0.79
VEGFA-222ENST00000520948 SMAD4Q13485 552 aaKnown RBP19.98■□□□□ 0.79
VEGFA-222ENST00000520948 TPRNQ4KMQ1 711 aa19.98■□□□□ 0.79
VEGFA-222ENST00000520948 PPP4R3CPQ6ZMV5 832 aa19.98■□□□□ 0.79
VEGFA-222ENST00000520948 KRBA2Q6ZNG9 492 aa19.98■□□□□ 0.79
VEGFA-222ENST00000520948 SPPL3Q8TCT6 385 aa19.98■□□□□ 0.79
VEGFA-222ENST00000520948 PAGE5Q96GU1 130 aa19.98■□□□□ 0.79
VEGFA-222ENST00000520948 C2orf40Q9H1Z8 148 aa19.98■□□□□ 0.79
VEGFA-222ENST00000520948 TMEM134Q9H6X4 195 aa19.98■□□□□ 0.79
VEGFA-222ENST00000520948 PARVGQ9HBI0 331 aa19.98■□□□□ 0.79
VEGFA-222ENST00000520948 CHST12Q9NRB3 414 aa19.98■□□□□ 0.79
VEGFA-222ENST00000520948 RGS18Q9NS28 235 aa19.98■□□□□ 0.79
VEGFA-222ENST00000520948 CD207Q9UJ71 328 aa19.98■□□□□ 0.79
VEGFA-222ENST00000520948 LRFN2Q9ULH4 789 aa19.98■□□□□ 0.79
VEGFA-222ENST00000520948 PCDHGC5Q9Y5F6 944 aa19.98■□□□□ 0.79
VEGFA-222ENST00000520948 FNDC1Q4ZHG4 1894 aaPredicted RBP19.97■□□□□ 0.79
VEGFA-222ENST00000520948 INO80B-WBP1J3KQ70 363 aa19.97■□□□□ 0.79
VEGFA-222ENST00000520948 FAM13AO94988 1023 aa19.97■□□□□ 0.79
VEGFA-222ENST00000520948 EFNA5P52803 228 aa19.97■□□□□ 0.79
VEGFA-222ENST00000520948 FAM189BP81408 668 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms