RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 FAM228BP0C875 321 aa29.25■■■□□ 2.27
COL13A1-212ENST00000520133 CYP24A1Q07973 514 aa29.25■■■□□ 2.27
COL13A1-212ENST00000520133 KRT39Q6A163 491 aa29.25■■■□□ 2.27
COL13A1-212ENST00000520133 ZNF571Q7Z3V5 609 aaPredicted RBP29.25■■■□□ 2.27
COL13A1-212ENST00000520133 PSPC1Q8WXF1 523 aaKnown RBP29.25■■■□□ 2.27
COL13A1-212ENST00000520133 ERAP1Q9NZ08 941 aa29.25■■■□□ 2.27
COL13A1-212ENST00000520133 EFNA5P52803 228 aa29.24■■■□□ 2.27
COL13A1-212ENST00000520133 TMEM63BQ5T3F8 832 aa29.24■■■□□ 2.27
COL13A1-212ENST00000520133 CHADLQ6NUI6 762 aa29.24■■■□□ 2.27
COL13A1-212ENST00000520133 PRPF31Q8WWY3 499 aaKnown RBP29.24■■■□□ 2.27
COL13A1-212ENST00000520133 SUGCTQ9HAC7 445 aa29.24■■■□□ 2.27
COL13A1-212ENST00000520133 TMEM8AQ9HCN3 771 aa29.24■■■□□ 2.27
COL13A1-212ENST00000520133 IGKV6-21A0A0C4DH24 114 aa29.24■■■□□ 2.27
COL13A1-212ENST00000520133 PHLDB3Q6NSJ2 640 aa29.24■■■□□ 2.27
COL13A1-212ENST00000520133 ANKRD7Q92527 254 aa29.24■■■□□ 2.27
COL13A1-212ENST00000520133 FAM213AQ9BRX8 229 aa29.24■■■□□ 2.27
COL13A1-212ENST00000520133 SLC5A4Q9NY91 659 aa29.24■■■□□ 2.27
COL13A1-212ENST00000520133 USP20Q9Y2K6 914 aa29.24■■■□□ 2.27
COL13A1-212ENST00000520133 ANO9A1A5B4 782 aa29.23■■■□□ 2.27
COL13A1-212ENST00000520133 LRRIQ3A6PVS8 624 aaPredicted RBP29.23■■■□□ 2.27
COL13A1-212ENST00000520133 EFCAB8A8MWE9 144 aa29.23■■■□□ 2.27
COL13A1-212ENST00000520133 GFPT2O94808 682 aa29.23■■■□□ 2.27
COL13A1-212ENST00000520133 LDHAP00338 332 aaKnown RBP29.23■■■□□ 2.27
COL13A1-212ENST00000520133 NAA30Q147X3 362 aaPredicted RBP29.23■■■□□ 2.27
COL13A1-212ENST00000520133 RNF10Q8N5U6 811 aaKnown RBP29.23■■■□□ 2.27
COL13A1-212ENST00000520133 EMID1Q96A84 441 aaPredicted RBP29.23■■■□□ 2.27
COL13A1-212ENST00000520133 MAML3Q96JK9 1138 aa29.23■■■□□ 2.27
COL13A1-212ENST00000520133 ALS2CR12Q96Q35 445 aa29.23■■■□□ 2.27
COL13A1-212ENST00000520133 ZBTB42B2RXF5 422 aa29.22■■■□□ 2.27
COL13A1-212ENST00000520133 EVI5O60447 810 aa29.22■■■□□ 2.27
COL13A1-212ENST00000520133 ZNF157P51786 506 aaPredicted RBP29.22■■■□□ 2.27
COL13A1-212ENST00000520133 CEP112Q8N8E3 955 aa29.22■■■□□ 2.27
COL13A1-212ENST00000520133 UBXN4Q92575 508 aa29.22■■■□□ 2.27
COL13A1-212ENST00000520133 KATNBL1Q9H079 304 aa29.22■■■□□ 2.27
COL13A1-212ENST00000520133 NOL12Q9UGY1 213 aaKnown RBP eCLIP29.22■■■□□ 2.27
COL13A1-212ENST00000520133 AGO2Q9UKV8 859 aaKnown RBP29.22■■■□□ 2.27
COL13A1-212ENST00000520133 V9GYY5 206 aaPredicted RBP29.22■■■□□ 2.27
COL13A1-212ENST00000520133 MANSC4A6NHS7 340 aaPredicted RBP29.22■■■□□ 2.27
COL13A1-212ENST00000520133 SLC15A5A6NIM6 579 aa29.22■■■□□ 2.27
COL13A1-212ENST00000520133 RBM10P98175 930 aaKnown RBP29.22■■■□□ 2.27
COL13A1-212ENST00000520133 DRP2Q13474 957 aa29.22■■■□□ 2.27
COL13A1-212ENST00000520133 BMS1Q14692 1282 aaKnown RBP29.22■■■□□ 2.27
COL13A1-212ENST00000520133 PPTC7Q8NI37 304 aa29.22■■■□□ 2.27
COL13A1-212ENST00000520133 ZCCHC17Q9NP64 241 aaKnown RBP29.22■■■□□ 2.27
COL13A1-212ENST00000520133 UBE2TQ9NPD8 197 aaPredicted RBP29.22■■■□□ 2.27
COL13A1-212ENST00000520133 COQ4Q9Y3A0 265 aa29.22■■■□□ 2.27
COL13A1-212ENST00000520133 ZNF236Q9UL36 1845 aa29.21■■■□□ 2.27
COL13A1-212ENST00000520133 TULP1O00294 542 aaPredicted RBP29.21■■■□□ 2.27
COL13A1-212ENST00000520133 SNAI1O95863 264 aaPredicted RBP29.21■■■□□ 2.27
COL13A1-212ENST00000520133 MAP2K1Q02750 393 aaPredicted RBP29.21■■■□□ 2.27
COL13A1-212ENST00000520133 ARHGAP44Q17R89 818 aa29.21■■■□□ 2.27
COL13A1-212ENST00000520133 ZBTB8OSQ8IWT0 167 aa29.21■■■□□ 2.27
COL13A1-212ENST00000520133 ZNF710Q8N1W2 664 aa29.21■■■□□ 2.27
COL13A1-212ENST00000520133 LRRN4CLQ8ND94 238 aa29.21■■■□□ 2.27
COL13A1-212ENST00000520133 EVPLQ92817 2033 aa29.21■■■□□ 2.27
COL13A1-212ENST00000520133 TADA3O75528 432 aa29.2■■■□□ 2.27
COL13A1-212ENST00000520133 ADCYAP1R1P41586 468 aa29.2■■■□□ 2.27
COL13A1-212ENST00000520133 LAMTOR4Q0VGL1 99 aa29.2■■■□□ 2.27
COL13A1-212ENST00000520133 WHAMMP3Q1A5X7 153 aa29.2■■■□□ 2.27
COL13A1-212ENST00000520133 ZPBP2Q6X784 338 aa29.2■■■□□ 2.27
COL13A1-212ENST00000520133 RASAL3Q86YV0 1011 aa29.2■■■□□ 2.27
COL13A1-212ENST00000520133 TINF2Q9BSI4 451 aa29.2■■■□□ 2.27
COL13A1-212ENST00000520133 TARS2Q9BW92 718 aaKnown RBP29.2■■■□□ 2.27
COL13A1-212ENST00000520133 GPR88Q9GZN0 384 aa29.2■■■□□ 2.27
COL13A1-212ENST00000520133 C2orf40Q9H1Z8 148 aa29.2■■■□□ 2.27
COL13A1-212ENST00000520133 ABHD16BQ9H3Z7 469 aa29.2■■■□□ 2.27
COL13A1-212ENST00000520133 LGALS2P05162 132 aa29.2■■■□□ 2.26
COL13A1-212ENST00000520133 MATR3P43243 847 aaKnown RBP eCLIP29.2■■■□□ 2.26
COL13A1-212ENST00000520133 AMPD2Q01433 879 aa29.2■■■□□ 2.26
COL13A1-212ENST00000520133 NAB2Q15742 525 aa29.2■■■□□ 2.26
COL13A1-212ENST00000520133 KIAA0753Q2KHM9 967 aa29.2■■■□□ 2.26
COL13A1-212ENST00000520133 ZNF484Q5JVG2 852 aa29.2■■■□□ 2.26
COL13A1-212ENST00000520133 PAPD7Q5XG87 772 aaKnown RBP29.2■■■□□ 2.26
COL13A1-212ENST00000520133 LRRC71Q8N4P6 559 aa29.2■■■□□ 2.26
COL13A1-212ENST00000520133 NOX5Q96PH1 765 aa29.2■■■□□ 2.26
COL13A1-212ENST00000520133 PNMA6AP0CW24 399 aaPredicted RBP29.19■■■□□ 2.26
COL13A1-212ENST00000520133 DLATP10515 647 aaKnown RBP29.19■■■□□ 2.26
COL13A1-212ENST00000520133 MKRN4PQ13434 485 aaPredicted RBP29.19■■■□□ 2.26
COL13A1-212ENST00000520133 TFDP1Q14186 410 aa29.19■■■□□ 2.26
COL13A1-212ENST00000520133 ELF2Q15723 593 aa29.19■■■□□ 2.26
COL13A1-212ENST00000520133 ERCC6LQ2NKX8 1250 aa29.19■■■□□ 2.26
COL13A1-212ENST00000520133 GJC2Q5T442 439 aaPredicted RBP29.19■■■□□ 2.26
COL13A1-212ENST00000520133 CDCA2Q69YH5 1023 aaPredicted RBP29.19■■■□□ 2.26
COL13A1-212ENST00000520133 ALKBH5Q6P6C2 394 aaKnown RBP29.19■■■□□ 2.26
COL13A1-212ENST00000520133 MSL3Q8N5Y2 521 aaKnown RBP29.19■■■□□ 2.26
COL13A1-212ENST00000520133 FBXL13Q8NEE6 735 aa29.19■■■□□ 2.26
COL13A1-212ENST00000520133 POP1Q99575 1024 aaKnown RBP29.19■■■□□ 2.26
COL13A1-212ENST00000520133 MSTO1Q9BUK6 570 aa29.19■■■□□ 2.26
COL13A1-212ENST00000520133 SUCLA2Q9P2R7 463 aaPredicted RBP29.19■■■□□ 2.26
COL13A1-212ENST00000520133 NAGPAQ9UK23 515 aa29.19■■■□□ 2.26
COL13A1-212ENST00000520133 JRKLQ9Y4A0 524 aa29.19■■■□□ 2.26
COL13A1-212ENST00000520133 ATP8B3O60423 1300 aa29.18■■■□□ 2.26
COL13A1-212ENST00000520133 ENC1O14682 589 aa29.18■■■□□ 2.26
COL13A1-212ENST00000520133 MOCS3O95396 460 aa29.18■■■□□ 2.26
COL13A1-212ENST00000520133 GPC3P51654 580 aa29.18■■■□□ 2.26
COL13A1-212ENST00000520133 PSMD6Q15008 389 aa29.18■■■□□ 2.26
COL13A1-212ENST00000520133 TRAPPC11Q7Z392 1133 aa29.18■■■□□ 2.26
COL13A1-212ENST00000520133 SRGAP1Q7Z6B7 1085 aa29.18■■■□□ 2.26
COL13A1-212ENST00000520133 RNF149Q8NC42 400 aa29.18■■■□□ 2.26
COL13A1-212ENST00000520133 FNBP1Q96RU3 617 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms